MGE detailed information
MGE type: Conjugative plasmid MGE length: 106949 bp
Accession: NZ_CP062899 Location: 1..106949 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: plasmid unnamed476
Accession: NZ_CP062899 Location: 1..106949 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: plasmid unnamed476
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP38_RS23420 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| IMP38_RS23425 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| IMP38_RS23430 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| IMP38_RS23435 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMP38_RS23440 () | 3638..6052 | - | 2415 | Protein_4 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IMP38_RS23445 () | 6056..6616 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IMP38_RS23450 () | 6792..7142 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMP38_RS23455 () | 7345..8358 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IMP38_RS23460 () | 8516..8989 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| IMP38_RS23465 () | 9120..9908 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IMP38_RS23470 () | 10110..10814 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IMP38_RS23475 () | 10867..11622 | + | 756 | Protein_11 | IS110 family transposase IS5075 | Transposase |
| IMP38_RS23480 () | 11804..11980 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IMP38_RS23485 () | 12310..13125 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| IMP38_RS23490 () | 13212..13454 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| IMP38_RS23495 () | 13408..13659 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| IMP38_RS23500 () | 13690..14826 | - | 1137 | WP_023140202.1 | IS91 family transposase ISVsa3 | Transposase |
| IMP38_RS23505 () | 15193..15462 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMP38_RS23510 () | 15459..15740 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP38_RS23515 () | 15780..16628 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| IMP38_RS23520 () | 16745..17218 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| IMP38_RS23525 () | 17695..17961 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| IMP38_RS23530 () | 17961..18455 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| IMP38_RS23535 () | 18511..19113 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| IMP38_RS23540 () | 19467..20813 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| IMP38_RS23545 () | 20920..21597 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| IMP38_RS23550 () | 21597..21944 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| IMP38_RS23555 () | 21964..23535 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| IMP38_RS23560 () | 23799..25679 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| IMP38_RS23565 () | 25697..26044 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| IMP38_RS23570 () | 26163..26511 | + | 349 | Protein_30 | hypothetical protein | - |
| IMP38_RS23575 () | 26531..27121 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| IMP38_RS23580 () | 27121..27378 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| IMP38_RS23585 () | 27729..28730 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| IMP38_RS23590 () | 28906..29250 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| IMP38_RS23595 () | 29749..30003 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| IMP38_RS23600 () | 30048..30974 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| IMP38_RS23605 () | 31506..31919 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| IMP38_RS23610 () | 31921..32700 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| IMP38_RS23615 () | 32880..33524 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IMP38_RS23620 () | 33611..33919 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IMP38_RS23625 () | 34333..35313 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| IMP38_RS23630 () | 35306..35722 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IMP38_RS23635 () | 35724..36998 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| IMP38_RS23640 () | 36998..37435 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMP38_RS23645 () | 37432..37680 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| IMP38_RS23650 () | 38098..39000 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| IMP38_RS23655 () | 38997..39308 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| IMP38_RS23660 () | 39385..40068 | + | 684 | WP_000086178.1 | DNA methylase | - |
| IMP38_RS23665 () | 40069..40290 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| IMP38_RS23670 () | 40302..40736 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| IMP38_RS23675 () | 40787..41557 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| IMP38_RS23680 () | 42098..42400 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| IMP38_RS23685 () | 42447..42869 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| IMP38_RS23690 () | 42866..43057 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| IMP38_RS23695 () | 43390..43458 | - | 69 | Protein_55 | pilus protein | - |
| IMP38_RS23700 () | 44479..46380 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| IMP38_RS23705 () | 46530..47015 | + | 486 | WP_031942454.1 | single-stranded DNA-binding protein | - |
| IMP38_RS23710 () | 47073..47306 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| IMP38_RS23715 () | 47365..49323 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP38_RS23720 () | 49378..49812 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| IMP38_RS23725 () | 49809..50528 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IMP38_RS23730 () | 50525..51121 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| IMP38_RS23735 () | 51584..52084 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| IMP38_RS23740 () | 52813..53247 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| IMP38_RS23745 () | 53339..53605 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| IMP38_RS23750 () | 53670..54611 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| IMP38_RS23755 () | 54673..54843 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| IMP38_RS23760 () | 54874..55125 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IMP38_RS23765 () | 55159..55356 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| IMP38_RS23770 () | 55705..56553 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| IMP38_RS23775 () | 56638..56973 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| IMP38_RS23780 () | 57207..57539 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IMP38_RS23785 () | 57550..60249 | + | 2700 | WP_024143648.1 | Protein TraI | Relaxase |
| IMP38_RS23790 () | 60286..62577 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| IMP38_RS23795 () | 62570..63640 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| IMP38_RS23800 () | 63659..64867 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 65047..65104 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 65047..65104 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 65047..65104 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 65047..65104 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| IMP38_RS23805 () | 65159..65311 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| IMP38_RS23810 () | 65383..65634 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| IMP38_RS23815 () | 66293..66469 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| IMP38_RS23820 () | 66861..67070 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| IMP38_RS23825 () | 67142..67792 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IMP38_RS23830 () | 67866..70034 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| IMP38_RS23835 () | 70131..70715 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IMP38_RS23840 () | 70744..71946 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IMP38_RS23845 () | 71913..72527 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IMP38_RS23850 () | 72527..73348 | - | 822 | Protein_86 | IncI1-type conjugal transfer protein TraU | - |
| IMP38_RS23855 () | 73290..73859 | - | 570 | WP_195686647.1 | hypothetical protein | - |
| IMP38_RS23860 () | 73843..74031 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| IMP38_RS23865 () | 74095..74499 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| IMP38_RS23870 () | 74550..75077 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| IMP38_RS23875 () | 75077..75781 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| IMP38_RS23880 () | 75781..77070 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| IMP38_RS23885 () | 77073..78056 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| IMP38_RS23890 () | 78140..78430 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| IMP38_RS23895 () | 78427..79575 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| IMP38_RS23900 () | 79572..80390 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| IMP38_RS23905 () | 80387..80845 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| IMP38_RS23910 () | 81240..81824 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IMP38_RS23915 () | 81884..83086 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IMP38_RS23920 () | 83171..83995 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| IMP38_RS23925 () | 84146..85300 | - | 1155 | WP_001139957.1 | integrase | - |
| IMP38_RS23930 () | 85878..86075 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| IMP38_RS23935 () | 86072..86320 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| IMP38_RS23940 () | 86676..86891 | + | 216 | Protein_104 | IS1380 family transposase ISEcp1 | Transposase |
| IMP38_RS23945 () | 86908..87605 | - | 698 | Protein_105 | IS1 family transposase | - |
| IMP38_RS23950 () | 87810..88772 | + | 963 | WP_195686648.1 | IS5 family transposase ISKpn26 | Transposase |
| IMP38_RS23955 () | 89151..90026 | + | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| IMP38_RS23960 () | 90073..90405 | - | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| IMP38_RS23965 () | 90628..91962 | - | 1335 | WP_024132209.1 | hypothetical protein | VF |
| IMP38_RS23970 () | 91962..92618 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| IMP38_RS23975 () | 92603..93163 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| IMP38_RS23980 () | 93173..93787 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| IMP38_RS23985 () | 93805..94902 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IMP38_RS23990 () | 94915..96468 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IMP38_RS23995 () | 96479..96931 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| IMP38_RS24000 () | 96918..98213 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| IMP38_RS24005 () | 98206..99888 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| IMP38_RS24010 () | 99902..100339 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| IMP38_RS24015 () | 100339..101406 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| IMP38_RS24020 () | 102030..102326 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| IMP38_RS24025 () | 102502..102756 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| IMP38_RS24030 () | 102918..103469 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| IMP38_RS24035 () | 103642..104325 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| IMP38_RS24040 () | 104579..105112 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| IMP38_RS24045 () | 105554..105841 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IMP38_RS24050 () | 105759..106022 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|