MGE detailed information
MGE type: Genomic_island MGE length: 12735 bp
Accession: NZ_CP062865 Location: 3925308..3938042 Organism: Escherichia coli O39:H21 strain Res13-Lact-PEB08-01 Replicon: chromosome
Accession: NZ_CP062865 Location: 3925308..3938042 Organism: Escherichia coli O39:H21 strain Res13-Lact-PEB08-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP90_RS18860 () | 3921633..3922841 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| IMP90_RS18865 () | 3922867..3924198 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| IMP90_RS18870 () | 3924220..3925209 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IMP90_RS18875 () | 3925308..3926246 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IMP90_RS18880 () | 3926435..3926779 | + | 345 | WP_000145820.1 | transcriptional activator TdcR | - |
| IMP90_RS18885 () | 3927035..3927574 | + | 540 | WP_000675745.1 | hypothetical protein | - |
| IMP90_RS18890 () | 3927596..3928783 | + | 1188 | WP_000484550.1 | YhaC family protein | - |
| IMP90_RS18895 () | 3929121..3930101 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| IMP90_RS18905 () | 3930866..3932011 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| IMP90_RS18910 () | 3932108..3932998 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IMP90_RS18915 () | 3933028..3933798 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IMP90_RS18920 () | 3933814..3935148 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IMP90_RS18925 () | 3935523..3937094 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| IMP90_RS18930 () | 3937243..3937578 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IMP90_RS18935 () | 3937578..3938042 | + | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IMP90_RS18940 () | 3938097..3938906 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IMP90_RS18945 () | 3939155..3940435 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IMP90_RS18950 () | 3940458..3940931 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IMP90_RS18955 () | 3940942..3941721 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| IMP90_RS18960 () | 3941711..3942589 | + | 879 | WP_001315856.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| IMP90_RS18965 () | 3942607..3943041 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|