MGE detailed information
MGE type: Prophage MGE length: 62151 bp
Accession: NZ_CP062863 Location: 2258285..2320435 Organism: Escherichia coli strain Res13-Lact-PEB14-36 Replicon: chromosome
Accession: NZ_CP062863 Location: 2258285..2320435 Organism: Escherichia coli strain Res13-Lact-PEB14-36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP96_RS12015 () | 2253666..2254376 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| IMP96_RS12020 () | 2254379..2254939 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IMP96_RS12025 () | 2254974..2255315 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IMP96_RS12030 () | 2255450..2255776 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IMP96_RS12035 () | 2255982..2257196 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IMP96_RS12040 () | 2257208..2258227 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IMP96_RS12045 () | 2258285..2258413 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| IMP96_RS12050 () | 2258415..2259695 | - | 1281 | WP_000876986.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IMP96_RS12055 () | 2259730..2259981 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IMP96_RS12060 () | 2260054..2262525 | - | 2472 | WP_021511903.1 | exonuclease | - |
| IMP96_RS12065 () | 2262619..2262810 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| IMP96_RS12070 () | 2262807..2262995 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| IMP96_RS12075 () | 2263563..2263781 | - | 219 | WP_001171925.1 | hypothetical protein | - |
| IMP96_RS12080 () | 2263941..2264096 | - | 156 | WP_000379578.1 | DUF1391 family protein | - |
| IMP96_RS12085 () | 2264265..2264672 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| IMP96_RS12090 () | 2264753..2264980 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| IMP96_RS12095 () | 2264964..2265485 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| IMP96_RS12100 () | 2265466..2266431 | + | 966 | WP_061350717.1 | hypothetical protein | - |
| IMP96_RS12105 () | 2266472..2266894 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| IMP96_RS12110 () | 2266891..2267247 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| IMP96_RS12115 () | 2267858..2268145 | + | 288 | Protein_2132 | hypothetical protein | - |
| IMP96_RS12120 () | 2268914..2270255 | + | 1342 | Protein_2133 | ISNCY family transposase ISCARN112 | Transposase |
| IMP96_RS12125 () | 2270692..2271024 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| IMP96_RS12130 () | 2271227..2271532 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IMP96_RS12135 () | 2271557..2271796 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IMP96_RS12140 () | 2271796..2272083 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IMP96_RS12145 () | 2272155..2272310 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IMP96_RS12150 () | 2272527..2272778 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IMP96_RS12155 () | 2272845..2273123 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IMP96_RS12160 () | 2273125..2274174 | + | 1050 | WP_061350716.1 | DUF968 domain-containing protein | - |
| IMP96_RS12165 () | 2274188..2274940 | + | 753 | WP_001047135.1 | antitermination protein | - |
| IMP96_RS12170 () | 2275218..2275307 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| IMP96_RS12175 () | 2275362..2275574 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IMP96_RS12180 () | 2275875..2276090 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IMP96_RS12185 () | 2276844..2277059 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IMP96_RS12190 () | 2277064..2277375 | + | 312 | WP_000189918.1 | DUF1327 domain-containing protein | - |
| IMP96_RS12195 () | 2277372..2277905 | + | 534 | WP_001092971.1 | lysozyme | - |
| IMP96_RS12200 () | 2277902..2278399 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| IMP96_RS12205 () | 2278763..2278975 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IMP96_RS12210 () | 2278986..2279174 | + | 189 | WP_071526745.1 | cold-shock protein | - |
| IMP96_RS12215 () | 2279322..2279477 | + | 156 | WP_001443523.1 | hypothetical protein | - |
| IMP96_RS12220 () | 2279650..2279823 | + | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| IMP96_RS12225 () | 2280119..2280325 | + | 207 | WP_000548593.1 | hypothetical protein | - |
| IMP96_RS12230 () | 2280876..2281415 | + | 540 | WP_000421823.1 | DUF1441 family protein | - |
| IMP96_RS12235 () | 2281424..2283523 | + | 2100 | WP_023277784.1 | phage terminase large subunit family protein | - |
| IMP96_RS12240 () | 2283520..2283732 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| IMP96_RS12245 () | 2283732..2285240 | + | 1509 | WP_000985929.1 | phage portal protein | - |
| IMP96_RS12250 () | 2285185..2287212 | + | 2028 | WP_023277783.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| IMP96_RS12255 () | 2287299..2287622 | + | 324 | WP_023140705.1 | DUF2190 family protein | - |
| IMP96_RS12260 () | 2287615..2287890 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| IMP96_RS12265 () | 2287902..2288480 | + | 579 | WP_023140704.1 | phage tail protein | - |
| IMP96_RS12270 () | 2288477..2288878 | + | 402 | WP_001079419.1 | phage minor tail U family protein | - |
| IMP96_RS12275 () | 2288889..2289632 | + | 744 | Protein_2164 | phage tail protein | - |
| IMP96_RS12280 () | 2289693..2290079 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| IMP96_RS12285 () | 2290088..2290417 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| IMP96_RS12290 () | 2290389..2293454 | + | 3066 | WP_195714520.1 | phage tail tape measure protein | - |
| IMP96_RS12295 () | 2293454..2293783 | + | 330 | WP_000447248.1 | phage tail protein | - |
| IMP96_RS12300 () | 2293793..2294491 | + | 699 | WP_061348596.1 | phage minor tail protein L | - |
| IMP96_RS12305 () | 2294497..2295240 | + | 744 | WP_000140751.1 | C40 family peptidase | - |
| IMP96_RS12310 () | 2295138..2295785 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| IMP96_RS12315 () | 2295845..2299258 | + | 3414 | WP_061350801.1 | host specificity protein J | - |
| IMP96_RS12320 () | 2299329..2299928 | + | 600 | WP_061348595.1 | hypothetical protein | VF |
| IMP96_RS12325 () | 2299993..2303067 | + | 3075 | WP_195714521.1 | phage tail protein | - |
| IMP96_RS12330 () | 2303067..2303642 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| IMP96_RS12335 () | 2303740..2304330 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IMP96_RS12340 () | 2304648..2304881 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IMP96_RS12345 () | 2304950..2305063 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IMP96_RS12350 () | 2305667..2306950 | + | 1284 | Protein_2179 | MHS family MFS transporter YdfJ | - |
| IMP96_RS12355 () | 2307039..2308499 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| IMP96_RS12360 () | 2308534..2308737 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IMP96_RS12365 () | 2308914..2309600 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IMP96_RS12370 () | 2309689..2310435 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| IMP96_RS12375 () | 2310572..2312617 | + | 2046 | WP_061350546.1 | peptidyl-dipeptidase Dcp | - |
| IMP96_RS12380 () | 2312661..2313179 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| IMP96_RS12385 () | 2313457..2313849 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| IMP96_RS12390 () | 2314104..2314994 | + | 891 | WP_000592802.1 | diguanylate cyclase DgcZ | - |
| IMP96_RS12395 () | 2315213..2315308 | - | 96 | WP_000901367.1 | protein MgtS | - |
| IMP96_RS12400 () | 2315435..2316622 | - | 1188 | WP_001054175.1 | efflux MFS transporter YdeE | - |
| IMP96_RS12405 () | 2316817..2317716 | + | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| IMP96_RS12410 () | 2317747..2317965 | - | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| IMP96_RS12415 () | 2317997..2318380 | - | 384 | WP_000091199.1 | HTH-type transcriptional activator RhaS | VF |
| IMP96_RS12420 () | 2318401..2318835 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| IMP96_RS12425 () | 2319055..2319375 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IMP96_RS12430 () | 2319365..2319649 | + | 285 | WP_000268704.1 | helix-turn-helix domain-containing protein | - |
| IMP96_RS12435 () | 2319770..2320435 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| IMP96_RS12440 () | 2320460..2321650 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| IMP96_RS12445 () | 2321800..2322915 | - | 1116 | WP_061350545.1 | putative protein YneK | - |
| IMP96_RS12450 () | 2322993..2323874 | - | 882 | WP_000366501.1 | LysR family transcriptional regulator | - |
| IMP96_RS12455 () | 2323975..2325363 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|