MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP062717 Location: 4845754..4866987 Organism: Escherichia coli O157:H7 strain Z1825 Replicon: chromosome
Accession: NZ_CP062717 Location: 4845754..4866987 Organism: Escherichia coli O157:H7 strain Z1825 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ56_RS24340 () | 4841480..4842022 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| ILQ56_RS24345 () | 4842315..4844465 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| ILQ56_RS24350 () | 4844515..4844718 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| ILQ56_RS24355 () | 4844729..4845685 | + | 957 | WP_001297640.1 | GTPase | - |
| ILQ56_RS24360 () | 4845754..4847112 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| ILQ56_RS24365 () | 4847121..4847405 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| ILQ56_RS24370 () | 4847683..4850115 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| ILQ56_RS24375 () | 4850182..4851651 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| ILQ56_RS24380 () | 4851651..4853405 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4853555..4853631 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4853555..4853631 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| ILQ56_RS24385 () | 4853626..4853967 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| ILQ56_RS24390 () | 4854014..4855177 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| ILQ56_RS24395 () | 4855225..4856106 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| ILQ56_RS24400 () | 4856203..4856367 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| ILQ56_RS24405 () | 4856544..4857956 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| ILQ56_RS24410 () | 4858199..4858399 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| ILQ56_RS24415 () | 4858404..4859156 | - | 753 | Protein_4778 | Recombination-promoting nuclease RpnD | VF |
| ILQ56_RS24420 () | 4859623..4860855 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| ILQ56_RS24425 () | 4860896..4862167 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| ILQ56_RS24430 () | 4862283..4863434 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| ILQ56_RS24435 () | 4863444..4864211 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| ILQ56_RS24440 () | 4864208..4864474 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| ILQ56_RS24445 () | 4864786..4866987 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| ILQ56_RS24450 () | 4867253..4868095 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| ILQ56_RS24455 () | 4868163..4869341 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |