MGE detailed information
MGE type: Prophage MGE length: 61159 bp
Accession: NZ_CP062405 Location: 1..61159 Organism: Staphylococcus aureus strain NAS_NP_209 Replicon: chromosome
Accession: NZ_CP062405 Location: 1..61159 Organism: Staphylococcus aureus strain NAS_NP_209 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF754_RS00010 () | 1..1662 | + | 1662 | WP_031775696.1 | terminase large subunit | - |
| IF754_RS00015 () | 1678..2865 | + | 1188 | WP_224212170.1 | phage portal protein | - |
| IF754_RS00020 () | 2849..3586 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| IF754_RS00025 () | 3610..4755 | + | 1146 | WP_000154558.1 | phage major capsid protein | - |
| IF754_RS00030 () | 4775..5059 | + | 285 | WP_000238240.1 | hypothetical protein | - |
| IF754_RS00035 () | 5049..5333 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| IF754_RS00040 () | 5317..5679 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| IF754_RS00045 () | 5676..6080 | + | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| IF754_RS00050 () | 6077..6484 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| IF754_RS00055 () | 6485..7129 | + | 645 | WP_000268736.1 | phage tail protein | - |
| IF754_RS00060 () | 7165..7395 | + | 231 | Protein_11 | Ig-like domain-containing protein | - |
| IF754_RS00065 () | 7445..7795 | + | 351 | WP_031906184.1 | hypothetical protein | - |
| IF754_RS00070 () | 7846..7983 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| IF754_RS00075 () | 8040..12569 | + | 4530 | WP_224212169.1 | phage tail tape measure protein | - |
| IF754_RS00080 () | 12566..14050 | + | 1485 | WP_031889406.1 | phage tail family protein | - |
| IF754_RS00085 () | 14066..17851 | + | 3786 | WP_031910186.1 | phage tail spike protein | - |
| IF754_RS00090 () | 17841..17993 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| IF754_RS00095 () | 18040..18327 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| IF754_RS00100 () | 18385..18681 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| IF754_RS00105 () | 18831..19007 | + | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - () | 18999..19138 | - | 140 | NuclAT_1 | - | - |
| - () | 18999..19138 | - | 140 | NuclAT_1 | - | - |
| - () | 18999..19138 | - | 140 | NuclAT_1 | - | - |
| - () | 18999..19138 | - | 140 | NuclAT_1 | - | - |
| IF754_RS00110 () | 19060..19167 | - | 108 | WP_001791821.1 | hypothetical protein | - |
| IF754_RS00115 () | 19219..19473 | + | 255 | WP_000611512.1 | phage holin | - |
| IF754_RS00120 () | 19485..20240 | + | 756 | WP_224212168.1 | CHAP domain-containing protein | - |
| IF754_RS00125 () | 20848..22053 | - | 1206 | WP_000264185.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IF754_RS00130 () | 22247..22960 | - | 714 | WP_224212175.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| IF754_RS00135 () | 23038..23220 | - | 183 | WP_000705240.1 | hypothetical protein | - |
| IF754_RS00140 () | 23290..23454 | - | 165 | WP_031872346.1 | hypothetical protein | - |
| IF754_RS00145 () | 23558..24259 | - | 702 | WP_031872347.1 | ion transporter | - |
| IF754_RS00150 () | 24337..24825 | - | 489 | WP_050439024.1 | hypothetical protein | - |
| IF754_RS00155 () | 24843..25295 | - | 453 | Protein_30 | S24 family peptidase | - |
| IF754_RS00160 () | 25554..25691 | - | 138 | Protein_31 | helix-turn-helix transcriptional regulator | - |
| IF754_RS00165 () | 25844..26080 | + | 237 | WP_031872350.1 | helix-turn-helix transcriptional regulator | - |
| IF754_RS00170 () | 26096..26848 | + | 753 | WP_031872351.1 | phage antirepressor KilAC domain-containing protein | - |
| IF754_RS00175 () | 26861..27121 | + | 261 | WP_000435343.1 | hypothetical protein | - |
| IF754_RS00180 () | 27145..27300 | - | 156 | Protein_35 | hypothetical protein | - |
| IF754_RS00185 () | 27355..27594 | + | 240 | WP_001294156.1 | hypothetical protein | - |
| IF754_RS00190 () | 27921..28247 | + | 327 | WP_001025595.1 | hypothetical protein | - |
| IF754_RS00195 () | 28244..28342 | + | 99 | Protein_38 | hypothetical protein | - |
| IF754_RS00200 () | 28492..28755 | + | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| IF754_RS00205 () | 28767..28928 | + | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| IF754_RS00210 () | 29018..29335 | + | 318 | WP_000829610.1 | hypothetical protein | - |
| IF754_RS00215 () | 29340..29600 | + | 261 | WP_209158826.1 | DUF1108 family protein | - |
| IF754_RS00220 () | 29608..29844 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| IF754_RS00225 () | 29837..30316 | + | 480 | WP_031904445.1 | siphovirus Gp157 family protein | - |
| IF754_RS00230 () | 30316..31089 | + | 774 | WP_001288247.1 | AAA family ATPase | - |
| IF754_RS00235 () | 31120..31674 | + | 555 | WP_031918488.1 | single-stranded DNA-binding protein | - |
| IF754_RS00240 () | 31687..32352 | + | 666 | WP_111040303.1 | putative HNHc nuclease | - |
| IF754_RS00245 () | 32352..33131 | + | 780 | WP_103144290.1 | AP2 domain-containing protein | - |
| IF754_RS00250 () | 33103..33906 | + | 804 | WP_000504988.1 | phage replisome organizer N-terminal domain-containing protein | - |
| IF754_RS00255 () | 33916..34689 | + | 774 | WP_224212174.1 | ATP-binding protein | - |
| IF754_RS00260 () | 34683..34841 | + | 159 | WP_000256597.1 | hypothetical protein | - |
| IF754_RS00265 () | 34855..35076 | + | 222 | WP_001123681.1 | DUF3269 family protein | - |
| IF754_RS00270 () | 35087..35491 | + | 405 | WP_000049798.1 | DUF1064 domain-containing protein | - |
| IF754_RS00275 () | 35496..35681 | + | 186 | WP_208161736.1 | DUF3113 family protein | - |
| IF754_RS00280 () | 35682..35987 | + | 306 | WP_000101252.1 | hypothetical protein | - |
| IF754_RS00285 () | 36115..36474 | + | 360 | WP_031924216.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF754_RS00290 () | 36475..36723 | + | 249 | WP_224212173.1 | SAV1978 family virulence-associated passenger protein | - |
| IF754_RS00295 () | 36737..36979 | + | 243 | WP_001065114.1 | DUF1024 family protein | - |
| IF754_RS00300 () | 36979..37194 | + | 216 | WP_224212172.1 | hypothetical protein | - |
| IF754_RS00305 () | 37187..37723 | + | 537 | WP_224212171.1 | dUTPase | - |
| IF754_RS00310 () | 37760..37933 | + | 174 | WP_001209217.1 | hypothetical protein | - |
| IF754_RS00315 () | 37950..38138 | + | 189 | WP_064286989.1 | DUF1381 domain-containing protein | - |
| IF754_RS00320 () | 38113..38313 | + | 201 | WP_001125015.1 | hypothetical protein | - |
| IF754_RS00325 () | 38316..38465 | + | 150 | WP_000237868.1 | transcriptional activator RinB | - |
| IF754_RS00330 () | 38624..39274 | + | 651 | WP_001005262.1 | hypothetical protein | - |
| IF754_RS00335 () | 39274..39474 | + | 201 | WP_000265041.1 | DUF1514 family protein | - |
| IF754_RS00340 () | 39502..39918 | + | 417 | WP_070958032.1 | transcriptional regulator | - |
| IF754_RS00345 () | 40150..40449 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| IF754_RS00350 () | 40579..40923 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| IF754_RS00355 () | 40920..42581 | + | 1662 | WP_031775696.1 | terminase large subunit | - |
| IF754_RS00360 () | 42597..43784 | + | 1188 | WP_224212170.1 | phage portal protein | - |
| IF754_RS00365 () | 43768..44505 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| IF754_RS00370 () | 44529..45674 | + | 1146 | WP_000154558.1 | phage major capsid protein | - |
| IF754_RS00375 () | 45694..45978 | + | 285 | WP_000238240.1 | hypothetical protein | - |
| IF754_RS00380 () | 45968..46252 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| IF754_RS00385 () | 46236..46598 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| IF754_RS00390 () | 46595..46999 | + | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| IF754_RS00395 () | 46996..47403 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| IF754_RS00400 () | 47404..48048 | + | 645 | WP_000268736.1 | phage tail protein | - |
| IF754_RS00405 () | 48102..48314 | + | 213 | WP_078101489.1 | Ig-like domain-containing protein | - |
| IF754_RS00410 () | 48364..48714 | + | 351 | WP_031906184.1 | hypothetical protein | - |
| IF754_RS00415 () | 48765..48902 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| IF754_RS00420 () | 48959..53488 | + | 4530 | WP_224212169.1 | phage tail tape measure protein | - |
| IF754_RS00425 () | 53485..54969 | + | 1485 | WP_031889406.1 | phage tail family protein | - |
| IF754_RS00430 () | 54985..58770 | + | 3786 | WP_031910186.1 | phage tail spike protein | - |
| IF754_RS00435 () | 58760..58912 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| IF754_RS00440 () | 58959..59246 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| IF754_RS00445 () | 59304..59600 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| IF754_RS00450 () | 59750..59926 | + | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - | 59914..60088 | - | 175 | - | - | Antitoxin Detail |
| IF754_RS00460 () | 60138..60392 | + | 255 | WP_000611512.1 | phage holin | - |
| IF754_RS00465 () | 60404..61159 | + | 756 | WP_224212168.1 | CHAP domain-containing protein | - |
| IF754_RS00470 () | 62056..62883 | - | 828 | WP_000136022.1 | alpha/beta hydrolase | - |
| IF754_RS00475 () | 62941..64155 | - | 1215 | WP_000286469.1 | NADH-dependent flavin oxidoreductase | - |
| IF754_RS00480 () | 64251..64349 | + | 99 | WP_001803958.1 | hypothetical protein | - |
| IF754_RS00485 () | 64463..65464 | + | 1002 | WP_000240069.1 | LLM class flavin-dependent oxidoreductase | - |
| IF754_RS00490 () | 65498..65830 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|