MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP062242 Location: 3261213..3282144 Organism: Escherichia coli strain AML001_par Replicon: chromosome
Accession: NZ_CP062242 Location: 3261213..3282144 Organism: Escherichia coli strain AML001_par Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHN53_RS15805 () | 3257045..3258376 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| IHN53_RS15810 () | 3258398..3259387 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IHN53_RS15815 () | 3259486..3260424 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IHN53_RS15820 () | 3260613..3260957 | + | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| IHN53_RS15825 () | 3261213..3261752 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| IHN53_RS15830 () | 3261774..3262961 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| IHN53_RS15840 () | 3263984..3265129 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| IHN53_RS15845 () | 3265226..3266116 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IHN53_RS15850 () | 3266146..3266916 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IHN53_RS15855 () | 3266932..3268266 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IHN53_RS15860 () | 3268641..3270212 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| IHN53_RS15865 () | 3270361..3270696 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IHN53_RS15870 () | 3270696..3271160 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IHN53_RS15875 () | 3271215..3272024 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IHN53_RS15880 () | 3272273..3273553 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IHN53_RS15885 () | 3273576..3274049 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IHN53_RS15890 () | 3274060..3274431 | + | 372 | Protein_3103 | PTS sugar transporter subunit IIC | - |
| IHN53_RS15895 () | 3274427..3274984 | + | 558 | Protein_3104 | amidohydrolase family protein | - |
| IHN53_RS15900 () | 3275335..3276489 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| IHN53_RS15905 () | 3276502..3277362 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| IHN53_RS15910 () | 3277529..3278005 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IHN53_RS15915 () | 3278044..3278847 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| IHN53_RS15920 () | 3278837..3279628 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| IHN53_RS15925 () | 3279629..3280384 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| IHN53_RS15930 () | 3280785..3281369 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| IHN53_RS15935 () | 3281449..3282144 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| IHN53_RS15940 () | 3282173..3284689 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| IHN53_RS15945 () | 3284700..3285791 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| IHN53_RS15950 () | 3285834..3286694 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|