MGE detailed information
MGE type: Conjugative plasmid MGE length: 68514 bp
Accession: NZ_CP061407 Location: 1..68514 Organism: Klebsiella pneumoniae strain NU-CRE055 Replicon: plasmid pCRE-055-3
Accession: NZ_CP061407 Location: 1..68514 Organism: Klebsiella pneumoniae strain NU-CRE055 Replicon: plasmid pCRE-055-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCV81_RS28165 () | 1..534 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| HCV81_RS28170 () | 545..1153 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| HCV81_RS28175 () | 1150..1701 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| HCV81_RS28180 () | 1761..2180 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| HCV81_RS28185 () | 2182..2475 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| HCV81_RS28190 () | 2492..3475 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| HCV81_RS28195 () | 3974..4513 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| HCV81_RS28200 () | 4518..4805 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| HCV81_RS28205 () | 4790..5890 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| HCV81_RS28210 () | 6913..7359 | - | 447 | WP_190811729.1 | hypothetical protein | - |
| HCV81_RS28215 () | 7377..8493 | - | 1117 | Protein_11 | phosphoadenosine phosphosulfate reductase family protein | - |
| HCV81_RS28220 () | 8761..9369 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| HCV81_RS28225 () | 9374..9895 | + | 522 | WP_059065734.1 | hypothetical protein | - |
| HCV81_RS28230 () | 9898..10419 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| HCV81_RS28235 () | 10516..10989 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| HCV81_RS28240 () | 11000..11293 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| HCV81_RS28245 () | 11298..12152 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| HCV81_RS28250 () | 12152..13111 | + | 960 | WP_072217556.1 | S49 family peptidase | - |
| HCV81_RS28255 () | 13127..13987 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| HCV81_RS28260 () | 14021..14449 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| HCV81_RS28265 () | 14506..14865 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| HCV81_RS28270 () | 14865..15311 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| HCV81_RS28275 () | 15308..15826 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| HCV81_RS28280 () | 15826..16056 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| HCV81_RS28285 () | 16043..16900 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| HCV81_RS28290 () | 17131..17658 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| HCV81_RS28295 () | 17716..17988 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| HCV81_RS28300 () | 18076..18369 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| HCV81_RS28305 () | 18396..18698 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| HCV81_RS28310 () | 18703..19053 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HCV81_RS28315 () | 19216..19764 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| HCV81_RS28320 () | 20105..20299 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| HCV81_RS28325 () | 20310..20681 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| HCV81_RS28330 () | 20674..21144 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| HCV81_RS28335 () | 21332..22036 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HCV81_RS28340 () | 22042..22182 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| HCV81_RS28345 () | 22645..22893 | + | 249 | WP_012585400.1 | type II toxin-antitoxin system YafQ family toxin | - |
| HCV81_RS28350 () | 23020..23595 | + | 576 | WP_001173919.1 | recombinase family protein | - |
| HCV81_RS28355 () | 23705..24442 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| HCV81_RS28360 () | 24439..24663 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| HCV81_RS28365 () | 24874..26367 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| HCV81_RS28370 () | 26398..26649 | + | 252 | WP_001445143.1 | hypothetical protein | - |
| HCV81_RS28375 () | 26603..26845 | - | 243 | Protein_43 | phosphoglucosamine mutase | - |
| HCV81_RS28380 () | 26932..27747 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HCV81_RS28385 () | 28054..28365 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| HCV81_RS28390 () | 28539..29324 | + | 786 | WP_001151304.1 | ParA family protein | - |
| HCV81_RS28395 () | 29328..30509 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| HCV81_RS28400 () | 30558..30830 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| HCV81_RS28405 () | 30883..31518 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| HCV81_RS28410 () | 31610..31753 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| HCV81_RS28415 () | 32072..32449 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| HCV81_RS28420 () | 32442..32723 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| HCV81_RS28425 () | 32698..33372 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| HCV81_RS28430 () | 33440..33871 | + | 432 | WP_005507681.1 | hypothetical protein | - |
| HCV81_RS28435 () | 33877..34188 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| HCV81_RS28440 () | 34197..34697 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| HCV81_RS28445 () | 34701..36125 | + | 1425 | WP_190811728.1 | DNA cytosine methyltransferase | - |
| HCV81_RS28450 () | 36125..36781 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| HCV81_RS28455 () | 36987..37205 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| HCV81_RS28460 () | 37299..37916 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| HCV81_RS28465 () | 38128..38427 | + | 300 | WP_000542259.1 | hypothetical protein | - |
| HCV81_RS28470 () | 38519..39007 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| HCV81_RS28475 () | 39022..41214 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| HCV81_RS28480 () | 41214..41447 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| HCV81_RS28485 () | 41429..42046 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| HCV81_RS28490 () | 42214..45192 | + | 2979 | WP_001337757.1 | TraI domain-containing protein | - |
| HCV81_RS28495 () | 45189..47054 | + | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| HCV81_RS28500 () | 47065..47649 | + | 585 | WP_000332866.1 | hypothetical protein | - |
| HCV81_RS28505 () | 47606..48235 | + | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| HCV81_RS28510 () | 48245..48691 | + | 447 | WP_000122506.1 | hypothetical protein | - |
| HCV81_RS28515 () | 48701..49078 | + | 378 | WP_000869261.1 | hypothetical protein | - |
| HCV81_RS28520 () | 49078..49740 | + | 663 | WP_001231463.1 | hypothetical protein | - |
| HCV81_RS28525 () | 49921..50064 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| HCV81_RS28530 () | 50064..50441 | + | 378 | WP_000509509.1 | hypothetical protein | - |
| HCV81_RS28535 () | 50586..50867 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| HCV81_RS28540 () | 50864..51490 | + | 627 | WP_001049716.1 | hypothetical protein | - |
| HCV81_RS28545 () | 51474..52391 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| HCV81_RS28550 () | 52391..53704 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| HCV81_RS28555 () | 53701..54279 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HCV81_RS28560 () | 54283..54675 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| HCV81_RS28565 () | 54743..55447 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HCV81_RS28570 () | 55643..56224 | + | 582 | WP_052952388.1 | 3'-5' exonuclease | - |
| HCV81_RS28575 () | 56221..56712 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| HCV81_RS28580 () | 57039..57914 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| HCV81_RS28585 () | 58076..59116 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| HCV81_RS28590 () | 59403..60914 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| HCV81_RS28595 () | 61025..62065 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| HCV81_RS28600 () | 62067..63500 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| HCV81_RS28605 () | 63513..67127 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HCV81_RS28610 () | 67165..67527 | - | 363 | WP_000683483.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|