MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP061367 Location: 4630382..4643356 Organism: Shigella sonnei strain 6207 Replicon: chromosome
Accession: NZ_CP061367 Location: 4630382..4643356 Organism: Shigella sonnei strain 6207 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC759_RS24225 (4625540) | 4625540..4626595 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IC759_RS24230 (4626666) | 4626666..4627451 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| IC759_RS24235 (4627423) | 4627423..4629135 | + | 1713 | Protein_4570 | flagellar biosynthesis protein FlhA | - |
| IC759_RS24240 (4629258) | 4629258..4629755 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| IC759_RS24245 (4629826) | 4629826..4629954 | - | 129 | Protein_4572 | ISAs1 family transposase | - |
| IC759_RS24250 (4630009) | 4630009..4630706 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| IC759_RS24255 (4630995) | 4630995..4631768 | - | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| IC759_RS24260 (4631954) | 4631954..4632214 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| IC759_RS24265 (4632217) | 4632217..4632495 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| IC759_RS24270 (4632651) | 4632651..4633391 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| IC759_RS24275 (4633362) | 4633362..4634129 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IC759_RS24280 (4634335) | 4634335..4634913 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| IC759_RS24285 (4635153) | 4635153..4637597 | + | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| IC759_RS24290 (4637640) | 4637640..4638086 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| IC759_RS24295 (4638267) | 4638267..4639037 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| IC759_RS24300 (4639079) | 4639079..4640215 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| IC759_RS24305 (4640684) | 4640684..4641061 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| IC759_RS24310 (4641061) | 4641061..4641471 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| IC759_RS24315 (4641509) | 4641509..4642645 | - | 1137 | Protein_4586 | ISAs1 family transposase ISEc1 | Transposase |
| IC759_RS24320 (4642907) | 4642907..4643356 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| IC759_RS24325 (4643368) | 4643368..4647585 | - | 4218 | WP_263452921.1 | RHS element core protein | - |
| IC759_RS24330 (4647661) | 4647661..4648209 | - | 549 | Protein_4589 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|