MGE detailed information
MGE type: Conjugative plasmid MGE length: 137911 bp
Accession: NZ_CP061340 Location: 1..137911 Organism: Escherichia coli strain M00057 Replicon: plasmid unnamed
Accession: NZ_CP061340 Location: 1..137911 Organism: Escherichia coli strain M00057 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC755_RS23450 () | 1..978 | + | 978 | WP_001414517.1 | RepB family plasmid replication initiator protein | - |
| IC755_RS23455 () | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| IC755_RS23460 () | 2124..2249 | - | 126 | WP_188926504.1 | transcriptional regulator | - |
| IC755_RS23465 () | 2845..3705 | + | 861 | WP_188926506.1 | Right origin-binding protein | VF |
| IC755_RS23470 () | 3720..3995 | + | 276 | WP_188926508.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| IC755_RS23475 () | 3999..4469 | + | 471 | WP_188926510.1 | hypothetical protein | - |
| IC755_RS23480 () | 4469..5263 | + | 795 | WP_062858142.1 | hypothetical protein | - |
| IC755_RS23485 () | 5260..6519 | + | 1260 | WP_188926512.1 | hypothetical protein | - |
| IC755_RS23490 () | 6479..7738 | + | 1260 | WP_188926514.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| IC755_RS23495 () | 7742..8191 | + | 450 | WP_188926515.1 | hypothetical protein | - |
| IC755_RS23500 () | 8194..10134 | + | 1941 | WP_188926517.1 | ATP-binding cassette domain-containing protein | - |
| IC755_RS23505 () | 10195..20766 | + | 10572 | WP_188926519.1 | Ig-like domain repeat protein | - |
| IC755_RS23510 () | 20835..21962 | - | 1128 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| IC755_RS23515 () | 22012..22359 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| IC755_RS23520 () | 22356..22736 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| IC755_RS23525 () | 22827..24242 | - | 1416 | Protein_15 | NTPase | - |
| IC755_RS23530 () | 24244..25332 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| IC755_RS23535 () | 25911..26129 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IC755_RS23540 () | 26131..26436 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IC755_RS23545 () | 26489..27221 | + | 733 | Protein_19 | phage integrase family protein | - |
| IC755_RS23550 () | 28008..28763 | + | 756 | WP_000852143.1 | replication initiation protein RepE | - |
| IC755_RS23555 () | 29351..30517 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| IC755_RS23560 () | 30517..31488 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IC755_RS23565 () | 32534..33067 | + | 534 | Protein_23 | DUF1281 domain-containing protein | - |
| IC755_RS23570 () | 33071..33376 | + | 306 | Protein_24 | hypothetical protein | - |
| IC755_RS23575 () | 33453..34135 | + | 683 | Protein_25 | DNA methylase | - |
| IC755_RS23580 () | 34136..34357 | + | 222 | WP_001104883.1 | hypothetical protein | - |
| IC755_RS23585 () | 34371..34805 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| IC755_RS23590 () | 34856..35635 | + | 780 | WP_053528480.1 | hypothetical protein | - |
| IC755_RS23595 () | 36175..36477 | + | 303 | WP_188926532.1 | antirestriction protein | - |
| IC755_RS23600 () | 36523..36942 | + | 420 | WP_188926521.1 | DUF1380 family protein | - |
| IC755_RS23605 () | 36942..37133 | + | 192 | WP_188926523.1 | hypothetical protein | - |
| IC755_RS23610 () | 37112..37454 | - | 343 | Protein_32 | pilus assembly protein | - |
| IC755_RS23615 () | 38135..38365 | + | 231 | WP_000218647.1 | hypothetical protein | - |
| IC755_RS23620 () | 38417..39778 | + | 1362 | WP_137592140.1 | DUF3560 domain-containing protein | - |
| IC755_RS23625 () | 39825..40388 | + | 564 | WP_012775864.1 | class I SAM-dependent methyltransferase | - |
| IC755_RS23630 () | 40346..40899 | - | 554 | Protein_36 | hypothetical protein | - |
| IC755_RS23635 () | 41200..41739 | + | 540 | WP_032219151.1 | single-stranded DNA-binding protein | - |
| IC755_RS23640 () | 41802..42035 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| IC755_RS23645 () | 42099..44058 | + | 1960 | Protein_39 | ParB/RepB/Spo0J family partition protein | - |
| IC755_RS23650 () | 44113..44547 | + | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| IC755_RS23655 () | 44544..45263 | + | 720 | WP_188926525.1 | plasmid SOS inhibition protein A | - |
| - () | 45275..45473 | + | 199 | NuclAT_0 | - | - |
| - () | 45275..45473 | + | 199 | NuclAT_0 | - | - |
| - () | 45275..45473 | + | 199 | NuclAT_0 | - | - |
| - () | 45275..45473 | + | 199 | NuclAT_0 | - | - |
| IC755_RS23660 () | 45538..45696 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| IC755_RS23665 () | 45934..46251 | - | 318 | WP_001356354.1 | hypothetical protein | - |
| IC755_RS23670 () | 46684..46881 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| IC755_RS23675 () | 47000..47821 | + | 822 | WP_188926533.1 | DUF945 domain-containing protein | - |
| IC755_RS23680 () | 48117..48707 | - | 591 | WP_001375132.1 | hypothetical protein | VF |
| IC755_RS23685 () | 49059..49442 | + | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| IC755_RS23690 () | 49634..50281 | + | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| IC755_RS23695 () | 50417..50632 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| IC755_RS23700 () | 50675..51040 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| IC755_RS23705 () | 51055..51366 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IC755_RS23710 () | 51388..51954 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| IC755_RS23715 () | 51965..52669 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| IC755_RS23720 () | 52669..54096 | + | 1428 | WP_000146676.1 | conjugal transfer protein TraB | - |
| IC755_RS23725 () | 54086..54457 | + | 372 | Protein_55 | conjugal transfer protein TraP | - |
| IC755_RS23730 () | 54494..55707 | + | 1214 | WP_085949589.1 | IS3-like element ISEc31 family transposase | - |
| IC755_RS23735 () | 55731..55937 | + | 207 | WP_075051332.1 | traP family protein | - |
| IC755_RS23740 () | 55891..56121 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| IC755_RS23745 () | 56133..56384 | + | 252 | WP_188926526.1 | conjugal transfer protein TrbG | - |
| IC755_RS23750 () | 56381..56896 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IC755_RS23755 () | 57031..57252 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IC755_RS23760 () | 57412..60039 | + | 2628 | WP_188926528.1 | type IV secretion system protein TraC | - |
| IC755_RS23765 () | 60036..60422 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| IC755_RS23770 () | 60419..61051 | + | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| IC755_RS23775 () | 61048..62040 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| IC755_RS23780 () | 62049..62687 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IC755_RS23785 () | 62684..64492 | + | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IC755_RS23790 () | 64519..64776 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| IC755_RS23795 () | 64769..65512 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IC755_RS23800 () | 65528..65875 | + | 348 | WP_032185993.1 | conjugal transfer protein TrbA | - |
| IC755_RS23805 () | 65955..66191 | - | 237 | WP_001352846.1 | hypothetical protein | - |
| IC755_RS23810 () | 66272..66556 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IC755_RS23815 () | 66543..67088 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IC755_RS23820 () | 67018..67365 | + | 348 | WP_188926530.1 | P-type conjugative transfer protein TrbJ | - |
| IC755_RS23825 () | 67313..67727 | + | 415 | Protein_75 | F-type conjugal transfer protein TrbF | - |
| IC755_RS23830 () | 67727..69100 | + | 1374 | WP_170816519.1 | conjugal transfer protein TraH | - |
| IC755_RS23835 () | 69097..71913 | + | 2817 | WP_188926459.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IC755_RS23840 () | 71946..72467 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| IC755_RS23845 () | 72492..73223 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| IC755_RS23850 () | 73476..75683 | + | 2208 | WP_188926461.1 | type IV conjugative transfer system coupling protein TraD | - |
| IC755_RS23855 () | 75692..76090 | - | 399 | WP_000911315.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IC755_RS23860 () | 76090..76317 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IC755_RS23865 () | 76399..81669 | + | 5271 | WP_188926463.1 | Multifunctional conjugation protein TraI | Relaxase |
| IC755_RS23870 () | 81689..82429 | + | 741 | WP_188926465.1 | conjugal transfer pilus acetylase TraX | - |
| IC755_RS23875 () | 82488..83347 | + | 860 | Protein_85 | alpha/beta hydrolase | - |
| IC755_RS23880 () | 83450..84010 | + | 561 | WP_032219136.1 | fertility inhibition protein FinO | - |
| IC755_RS23885 () | 84139..84354 | + | 216 | WP_032219135.1 | hypothetical protein | - |
| IC755_RS23890 () | 85074..85508 | + | 435 | WP_188926466.1 | IS66 family transposase ISEc43 | Transposase |
| IC755_RS23895 () | 85505..85855 | + | 351 | WP_188926468.1 | IS66 family transposase IS682 | Transposase |
| IC755_RS23900 () | 85886..87474 | + | 1589 | Protein_90 | IS66 family transposase ISEc23 | Transposase |
| IC755_RS23905 () | 87967..89190 | + | 1224 | WP_062858062.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| IC755_RS23910 () | 89210..89758 | + | 549 | WP_188926476.1 | AIDA repeat-containing protein | - |
| IC755_RS23915 () | 89922..90104 | + | 183 | Protein_93 | prepilin peptidase | - |
| IC755_RS23920 () | 90170..90580 | + | 411 | WP_188926478.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| IC755_RS23925 () | 90598..91557 | + | 960 | WP_188926480.1 | Type II secretion system protein C | VF |
| IC755_RS23930 () | 91587..93647 | + | 2061 | WP_000498817.1 | Type II secretion system protein D | VF |
| IC755_RS23935 () | 93647..95140 | + | 1494 | WP_188926482.1 | Type II secretion system protein E | VF |
| IC755_RS23940 () | 95140..96363 | + | 1224 | WP_001173433.1 | Type II secretion system protein F | VF |
| IC755_RS23945 () | 96380..96835 | + | 456 | WP_188926484.1 | Type II secretion system protein G | VF |
| IC755_RS23950 () | 96839..97402 | + | 564 | WP_188926486.1 | Type II secretion system protein H | VF |
| IC755_RS23955 () | 97399..97770 | + | 372 | WP_188926488.1 | Type II secretion system protein I | VF |
| IC755_RS23960 () | 97767..98372 | + | 606 | WP_001514540.1 | Type II secretion system protein J | VF |
| IC755_RS23965 () | 98369..99346 | + | 978 | WP_000633221.1 | Putative type II secretion system protein K | VF |
| IC755_RS23970 () | 99343..100536 | + | 1194 | WP_188926490.1 | Type II secretion system protein L | VF |
| IC755_RS23975 () | 100523..101059 | + | 537 | WP_188926492.1 | Type II secretion system protein M | VF |
| IC755_RS23980 () | 101096..101318 | - | 223 | Protein_106 | IS3 family transposase | - |
| IC755_RS23985 () | 101474..102208 | + | 735 | WP_188926494.1 | Heat-labile enterotoxin IIB, A chain | VF |
| IC755_RS23990 () | 102211..102579 | + | 369 | WP_188926496.1 | Heat-labile enterotoxin IIA, B chain | - |
| IC755_RS23995 () | 102836..103378 | - | 543 | Protein_109 | Tn3 family transposase | - |
| IC755_RS24000 () | 103417..104650 | - | 1234 | Protein_110 | IS66 family transposase ISKpn24 | Transposase |
| IC755_RS24005 () | 104714..104968 | + | 255 | Protein_111 | IS3 family transposase | - |
| IC755_RS24010 () | 105069..105316 | + | 248 | Protein_112 | ATP-binding protein | - |
| IC755_RS24015 () | 105542..105757 | + | 216 | WP_062858042.1 | hypothetical protein | - |
| IC755_RS24020 () | 106159..107296 | - | 1138 | Protein_114 | IS3 family transposase IS3F | Transposase |
| IC755_RS24025 () | 107523..108875 | + | 1353 | WP_062858040.1 | esterase-like activity of phytase family protein | - |
| IC755_RS24030 () | 109049..109555 | - | 507 | WP_062858039.1 | thiol peroxidase | - |
| IC755_RS24035 () | 110588..112075 | + | 1488 | WP_188926535.1 | PhoPQ-regulated protein | - |
| IC755_RS24040 () | 112839..113102 | + | 264 | WP_062858037.1 | hypothetical protein | - |
| IC755_RS24045 () | 113092..113391 | + | 300 | Protein_119 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IC755_RS24050 () | 113919..114524 | - | 606 | WP_062858035.1 | proQ/FINO family protein | - |
| IC755_RS24055 () | 114964..115196 | + | 233 | Protein_121 | hypothetical protein | - |
| IC755_RS24060 () | 115404..115582 | + | 179 | Protein_122 | conjugal transfer protein | - |
| IC755_RS24065 () | 115641..116498 | + | 858 | WP_188926498.1 | putative protein YcjY | VF |
| IC755_RS24070 () | 116591..117066 | - | 476 | Protein_124 | IS256 family transposase IS1414 | Transposase |
| IC755_RS24075 () | 117330..117532 | - | 203 | Protein_125 | IS91 family transposase | - |
| IC755_RS24080 () | 117585..118013 | - | 429 | Protein_126 | IS3 family transposase IS2 | Transposase |
| IC755_RS24085 () | 118211..119167 | + | 957 | WP_188926500.1 | Ferri-bacillibactin esterase BesA | VF |
| IC755_RS24090 () | 119212..119905 | - | 694 | Protein_128 | TonB-dependent receptor | - |
| IC755_RS24095 () | 120749..121059 | + | 311 | Protein_129 | hypothetical protein | - |
| IC755_RS24100 () | 121672..123327 | + | 1656 | WP_062858027.1 | L-lactate permease | - |
| IC755_RS24105 () | 123327..124103 | + | 777 | WP_188926502.1 | transcriptional regulator LldR | - |
| IC755_RS24110 () | 124100..125249 | + | 1150 | Protein_132 | quinone-dependent L-lactate dehydrogenase | - |
| IC755_RS24115 () | 126335..127240 | - | 906 | Protein_133 | IS3 family transposase ISEc31 | Transposase |
| IC755_RS24120 () | 127305..128456 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IC755_RS24125 () | 128466..128873 | + | 408 | Protein_135 | IS3 family transposase | - |
| IC755_RS24135 () | 130185..130829 | - | 645 | Protein_137 | IS30 family transposase IS30D | Transposase |
| IC755_RS24140 () | 130897..131199 | - | 303 | Protein_138 | IS3 family transposase ISEc31 | Transposase |
| IC755_RS24145 () | 131384..131499 | - | 116 | Protein_139 | IS110 family transposase ISEc21 | Transposase |
| IC755_RS24155 () | 132812..133456 | - | 645 | Protein_141 | IS30 family transposase IS30D | Transposase |
| IC755_RS24160 () | 133524..133826 | - | 303 | Protein_142 | IS3 family transposase ISEc31 | Transposase |
| IC755_RS24165 () | 134011..134126 | - | 116 | Protein_143 | IS110 family transposase ISEc21 | Transposase |
| IC755_RS24175 () | 135439..136083 | - | 645 | Protein_145 | IS30 family transposase IS30D | Transposase |
| IC755_RS24180 () | 136148..136327 | - | 180 | Protein_146 | IS3 family transposase | - |
| IC755_RS24185 () | 136450..136701 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| IC755_RS24190 () | 136698..136985 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IC755_RS24195 () | 136984..137232 | + | 249 | Protein_149 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|