MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 127456 bp
Accession: NZ_CP061330 Location: 1..127456 Organism: Escherichia coli strain EC93 Replicon: plasmid pCP127
Accession: NZ_CP061330 Location: 1..127456 Organism: Escherichia coli strain EC93 Replicon: plasmid pCP127
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8529_RS23050 () | 246..1223 | - | 978 | WP_000361618.1 | RepB family plasmid replication initiator protein | - |
| H8529_RS23055 () | 1873..2153 | - | 281 | Protein_1 | IS3 family transposase ISKpn37 | Transposase |
| H8529_RS23060 () | 2152..2439 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H8529_RS23065 () | 2436..2687 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| H8529_RS23070 () | 2852..3064 | - | 213 | WP_032334873.1 | hypothetical protein | - |
| H8529_RS23075 () | 3438..4643 | + | 1206 | WP_154813358.1 | Plasmid partition protein A | VF |
| H8529_RS23080 () | 4640..5602 | + | 963 | WP_000756325.1 | ParB/RepB/Spo0J family partition protein | - |
| H8529_RS23085 () | 5836..6579 | + | 744 | Protein_7 | IS4 family transposase ISEc13 | Transposase |
| H8529_RS23090 () | 6705..7211 | + | 507 | Protein_8 | DUF1281 domain-containing protein | - |
| H8529_RS23095 () | 7520..8665 | + | 1146 | WP_073519881.1 | IS21 family transposase IS21 | Transposase |
| H8529_RS23100 () | 8665..9213 | + | 549 | Protein_10 | IS21 family transposase IS21 | Transposase |
| H8529_RS23105 () | 9525..11297 | + | 1773 | WP_188214222.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| H8529_RS23110 () | 11310..20639 | + | 9330 | WP_061892950.1 | Toxin CdiA | VF |
| H8529_RS23115 () | 20626..21084 | + | 459 | WP_000602704.1 | hypothetical protein | - |
| H8529_RS23120 () | 21160..21537 | + | 378 | WP_001313590.1 | hypothetical protein | - |
| H8529_RS23125 () | 21550..21765 | + | 216 | WP_001672744.1 | hypothetical protein | - |
| H8529_RS23130 () | 22037..22279 | + | 243 | WP_001291700.1 | hypothetical protein | - |
| H8529_RS23135 () | 22341..23548 | + | 1208 | Protein_17 | IS256 family transposase ISEc39 | Transposase |
| H8529_RS23140 () | 24032..24304 | - | 273 | WP_001270785.1 | transcriptional regulator | - |
| H8529_RS23145 () | 24551..28666 | - | 4116 | WP_001045651.1 | Serine protease pic autotransporter | VF |
| H8529_RS23150 () | 29772..29994 | + | 223 | Protein_20 | hypothetical protein | - |
| H8529_RS23155 () | 30289..31904 | + | 1616 | Protein_21 | ISL3 family transposase | - |
| H8529_RS23160 () | 32720..33022 | + | 303 | WP_001304897.1 | PbsX family transcriptional regulator | - |
| H8529_RS23165 () | 33075..34322 | + | 1248 | WP_000823141.1 | TolC family protein | - |
| H8529_RS23170 () | 34347..36494 | + | 2148 | WP_000835430.1 | type I secretion system permease/ATPase | - |
| H8529_RS23175 () | 36555..37802 | + | 1248 | WP_001304895.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| H8529_RS23180 () | 38001..40085 | + | 2085 | Protein_26 | hypothetical protein | VF |
| H8529_RS23185 () | 41904..43838 | + | 1935 | WP_000383027.1 | hypothetical protein | VF |
| H8529_RS23190 () | 43959..44441 | + | 483 | WP_001024300.1 | sigma-70 family RNA polymerase sigma factor | - |
| H8529_RS23195 () | 44463..44972 | + | 510 | WP_061892769.1 | Transcriptional regulatory protein RcsB | VF |
| H8529_RS23200 () | 44989..45809 | - | 821 | Protein_30 | IS630 family transposase ISEc40 | Transposase |
| H8529_RS23205 () | 46115..46387 | + | 273 | Protein_31 | integrating conjugative element protein | - |
| H8529_RS23210 () | 46413..46607 | + | 195 | Protein_32 | transposase | - |
| H8529_RS23215 () | 46659..47429 | - | 771 | WP_001304891.1 | 2-oxoglutaramate amidase | - |
| H8529_RS23220 () | 47583..48056 | + | 474 | WP_000532690.1 | Ivy family C-type lysozyme inhibitor | - |
| H8529_RS23225 () | 48099..50543 | - | 2445 | WP_061892770.1 | Acyl-coenzyme A dehydrogenase | VF |
| H8529_RS23230 () | 50783..51361 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| H8529_RS23235 () | 51566..52333 | + | 768 | WP_001304889.1 | class II glutamine amidotransferase | - |
| H8529_RS23240 () | 52304..53044 | - | 741 | WP_001225680.1 | murein L,D-transpeptidase | - |
| H8529_RS23245 () | 53356..54105 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| H8529_RS23250 () | 54281..56020 | - | 1740 | WP_001304888.1 | Flagellar biosynthesis protein FlhA | VF |
| H8529_RS23255 () | 55965..56750 | + | 786 | WP_000207550.1 | Chemotaxis protein LafU | VF |
| H8529_RS23260 () | 56821..57876 | + | 1056 | WP_001226161.1 | DNA polymerase IV | - |
| H8529_RS23265 () | 57873..58325 | + | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| H8529_RS23270 () | 58515..59654 | + | 1140 | WP_000521562.1 | RNA ligase RtcB family protein | - |
| H8529_RS23275 () | 59651..60265 | + | 615 | WP_000602135.1 | peptide chain release factor H | - |
| H8529_RS23280 () | 60322..61779 | - | 1458 | WP_001293000.1 | cytosol nonspecific dipeptidase | - |
| H8529_RS23285 () | 62040..62498 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| H8529_RS23290 () | 62590..63834 | + | 1245 | WP_188214200.1 | esterase FrsA | - |
| - () | 63094..63174 | + | 81 | NuclAT_0 | - | - |
| - () | 63094..63174 | + | 81 | NuclAT_0 | - | - |
| - () | 63094..63174 | + | 81 | NuclAT_0 | - | - |
| - () | 63094..63174 | + | 81 | NuclAT_0 | - | - |
| H8529_RS23295 () | 63892..64293 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| H8529_RS23300 () | 64332..65387 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| H8529_RS23305 () | 65675..66778 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H8529_RS23310 () | 66790..68043 | + | 1254 | WP_000893255.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H8529_RS23320 () | 68544..69149 | + | 606 | WP_049590156.1 | hypothetical protein | - |
| H8529_RS23325 () | 69161..70368 | - | 1208 | Protein_54 | IS256 family transposase ISEc39 | Transposase |
| H8529_RS23330 () | 70549..72186 | - | 1638 | WP_049590157.1 | hypothetical protein | - |
| H8529_RS23335 () | 72877..73104 | + | 228 | WP_000266639.1 | AlpA family phage regulatory protein | - |
| H8529_RS23340 () | 73210..73437 | + | 228 | WP_000120392.1 | DUF3987 domain-containing protein | - |
| H8529_RS23345 () | 73685..75118 | + | 1434 | WP_000335694.1 | DUF3987 domain-containing protein | - |
| H8529_RS23350 () | 75968..76531 | + | 564 | WP_049590562.1 | inovirus-type Gp2 protein | - |
| H8529_RS23355 () | 76687..79053 | + | 2367 | WP_061892948.1 | DEAD/DEAH box helicase family protein | - |
| H8529_RS23360 () | 79071..79697 | - | 627 | WP_000175354.1 | hypothetical protein | - |
| H8529_RS23365 () | 79694..80587 | - | 894 | WP_001367158.1 | DNA-protecting protein DprA | - |
| H8529_RS23370 () | 81182..82948 | + | 1767 | WP_188214218.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| H8529_RS23375 () | 82961..91693 | + | 8733 | Protein_64 | Toxin CdiA | VF |
| H8529_RS23380 () | 92356..92595 | + | 240 | WP_154813344.1 | hypothetical protein | - |
| H8529_RS23385 () | 92592..93284 | + | 693 | WP_154813345.1 | hemagglutinin | - |
| H8529_RS23390 () | 93281..93670 | + | 390 | WP_154813346.1 | hypothetical protein | - |
| H8529_RS23395 () | 93961..94467 | + | 507 | WP_000410600.1 | IS3 family transposase ISBope1 | Transposase |
| H8529_RS23400 () | 94443..95306 | + | 864 | WP_000935776.1 | IS3 family transposase ISEcB1 | Transposase |
| H8529_RS23405 () | 95360..95968 | + | 609 | WP_188214219.1 | IS66 family transposase ISCro1 | Transposase |
| H8529_RS23410 () | 95965..96312 | + | 348 | WP_073520663.1 | IS66 family transposase ISSfl3 | Transposase |
| H8529_RS23415 () | 96332..97888 | + | 1557 | WP_154813347.1 | IS66 family transposase ISSfl3 | Transposase |
| H8529_RS23420 () | 97888..98910 | + | 1023 | WP_154813351.1 | hypothetical protein | - |
| H8529_RS23425 () | 98907..99392 | + | 486 | WP_032334889.1 | hypothetical protein | - |
| H8529_RS23430 () | 99650..100144 | + | 495 | WP_154813348.1 | hypothetical protein | - |
| H8529_RS23435 () | 100149..100603 | + | 455 | Protein_76 | hypothetical protein | - |
| H8529_RS23440 () | 100655..101028 | + | 374 | Protein_77 | adhesin | - |
| H8529_RS23445 () | 101125..101382 | + | 258 | WP_188214223.1 | hemagglutinin | - |
| H8529_RS23450 () | 101388..101738 | + | 351 | WP_154813350.1 | DUF596 domain-containing protein | - |
| H8529_RS23455 () | 101729..102008 | + | 280 | Protein_80 | hypothetical protein | - |
| H8529_RS23460 () | 102249..102751 | + | 503 | Protein_81 | DUF2569 domain-containing protein | - |
| H8529_RS23465 () | 102816..103295 | - | 480 | Protein_82 | Tn3 family transposase ISPsy42 | Transposase |
| H8529_RS23470 () | 103359..104116 | + | 758 | Protein_83 | IS3 family transposase | - |
| H8529_RS23475 () | 104148..104411 | - | 264 | WP_077897983.1 | HNH endonuclease | - |
| H8529_RS23480 () | 104464..105476 | + | 1013 | Protein_85 | IS21 family transposase IS100kyp | Transposase |
| H8529_RS23485 () | 105484..106262 | + | 779 | Protein_86 | IS21 family transposase IS100kyp | Transposase |
| H8529_RS23490 () | 106326..106835 | - | 510 | Protein_87 | HNH endonuclease | - |
| H8529_RS23495 () | 106958..107198 | - | 241 | Protein_88 | IS91 family transposase ISSbo1 | Transposase |
| H8529_RS23500 () | 107985..108284 | + | 300 | WP_073519900.1 | Major pilu subunit operon regulatory protein PapB | VF |
| H8529_RS23505 () | 108292..108834 | + | 543 | WP_073519899.1 | hypothetical protein | VF |
| H8529_RS23510 () | 108849..111293 | + | 2445 | WP_073519898.1 | Outer membrane usher protein YraJ | VF |
| H8529_RS23515 () | 111286..112062 | + | 777 | WP_073519897.1 | Chaperone protein FaeE | VF |
| H8529_RS23520 () | 112097..112588 | + | 492 | WP_073519896.1 | hypothetical protein | VF |
| H8529_RS23525 () | 112810..113607 | + | 798 | WP_073519895.1 | hypothetical protein | - |
| H8529_RS23530 () | 113805..114602 | + | 798 | WP_073519894.1 | hypothetical protein | VF |
| H8529_RS23535 () | 114632..115396 | + | 765 | WP_188214220.1 | hypothetical protein | VF |
| H8529_RS23540 () | 115413..116174 | + | 762 | WP_073519892.1 | hypothetical protein | VF |
| H8529_RS23545 () | 116416..116700 | - | 285 | WP_077897980.1 | Major pilu subunit operon regulatory protein PapB | VF |
| H8529_RS23550 () | 116784..120713 | - | 3930 | WP_188214221.1 | Serine protease EspC | VF |
| H8529_RS23555 () | 121631..122056 | + | 426 | Protein_100 | IS3 family transposase ISEc16 | Transposase |
| H8529_RS23560 () | 122332..123331 | + | 1000 | Protein_101 | colicin transporter | - |
| H8529_RS23565 () | 123661..123931 | + | 271 | Protein_102 | transcriptional regulator | - |
| H8529_RS23570 () | 124267..124373 | + | 107 | Protein_103 | IS110 family transposase | - |
| H8529_RS23575 () | 124375..124584 | + | 210 | Protein_104 | hypothetical protein | - |
| H8529_RS23580 () | 124837..126006 | - | 1170 | WP_154813357.1 | hypothetical protein | - |
| H8529_RS23585 () | 126368..126514 | + | 147 | WP_097295046.1 | serine/threonine protein kinase | - |
| H8529_RS23590 () | 126677..127417 | + | 741 | WP_073519885.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|