MGE detailed information
MGE type: Prophage MGE length: 37399 bp
Accession: NZ_CP060928 Location: 3976398..4013796 Organism: Escherichia coli strain EC13 Replicon: chromosome
Accession: NZ_CP060928 Location: 3976398..4013796 Organism: Escherichia coli strain EC13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
H9200_RS19285 (3971841) | 3971841..3973559 | - | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
H9200_RS19290 (3973671) | 3973671..3974378 | - | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
H9200_RS19295 (3974375) | 3974375..3974779 | - | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
H9200_RS19300 (3974897) | 3974897..3975712 | - | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
H9200_RS19305 (3975752) | 3975752..3976405 | - | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
H9200_RS19310 (3976398) | 3976398..3977429 | - | 1032 | WP_000594006.1 | hypothetical protein | VF |
H9200_RS19315 (3977617) | 3977617..3978192 | + | 576 | WP_001140187.1 | hypothetical protein | VF |
H9200_RS19350 (3983952) | 3983952..3984755 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
H9200_RS19355 (3984752) | 3984752..3985666 | - | 915 | WP_000648572.1 | hypothetical protein | VF |
H9200_RS19360 (3985907) | 3985907..3986707 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
H9200_RS19365 (3986738) | 3986738..3987334 | + | 597 | Protein_3786 | methyltransferase domain-containing protein | - |
H9200_RS19370 (3987382) | 3987382..3988740 | - | 1359 | WP_000644685.1 | hypothetical protein | VF |
H9200_RS19375 (3988812) | 3988812..3989567 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
H9200_RS19380 (3989601) | 3989601..3990323 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
H9200_RS19385 (3990320) | 3990320..3990787 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
H9200_RS19390 (3990852) | 3990852..3991583 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
H9200_RS19400 (3992120) | 3992120..3992275 | + | 156 | Protein_3792 | hypothetical protein | - |
H9200_RS19410 (3993042) | 3993042..3993911 | - | 870 | Protein_3794 | hypothetical protein | VF |
H9200_RS19415 (3993962) | 3993962..3994186 | - | 225 | WP_000123970.1 | hypothetical protein | - |
H9200_RS19420 (3994221) | 3994221..3994721 | - | 501 | WP_000037397.1 | hypothetical protein | VF |
H9200_RS19425 (3995416) | 3995416..3995934 | + | 519 | WP_001142958.1 | hypothetical protein | VF |
H9200_RS19430 (3996144) | 3996144..3999284 | + | 3141 | WP_166509038.1 | hypothetical protein | VF |
H9200_RS19435 (3999262) | 3999262..3999654 | + | 393 | WP_001101839.1 | hypothetical protein | - |
H9200_RS19440 (4000085) | 4000085..4001221 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
H9200_RS19445 (4001262) | 4001262..4002032 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
H9200_RS19450 (4002213) | 4002213..4002659 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
H9200_RS19455 (4002702) | 4002702..4005146 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
H9200_RS19460 (4005386) | 4005386..4005964 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
H9200_RS19465 (4006170) | 4006170..4006937 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
H9200_RS19470 (4006908) | 4006908..4007648 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
H9200_RS19475 (4007804) | 4007804..4008082 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
H9200_RS19480 (4008085) | 4008085..4008345 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
H9200_RS19485 (4008555) | 4008555..4009304 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
H9200_RS19490 (4009480) | 4009480..4009977 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
H9200_RS19495 (4010201) | 4010201..4011913 | - | 1713 | Protein_3811 | hypothetical protein | VF |
H9200_RS19500 (4011885) | 4011885..4012670 | + | 786 | WP_000207552.1 | hypothetical protein | VF |
H9200_RS19505 (4012741) | 4012741..4013796 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
H9200_RS19510 (4013848) | 4013848..4014141 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | - |
H9200_RS19515 (4014144) | 4014144..4014542 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
H9200_RS19520 (4014552) | 4014552..4015004 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
H9200_RS19525 (4015322) | 4015322..4015528 | + | 207 | Protein_3817 | RtcB family protein | - |
H9200_RS19530 (4015524) | 4015524..4016045 | + | 522 | Protein_3818 | peptide chain release factor H | - |
H9200_RS19535 (4016102) | 4016102..4017559 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
H9200_RS19540 (4017820) | 4017820..4018278 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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