MGE detailed information
MGE type: Prophage MGE length: 58235 bp
Accession: NZ_CP060914 Location: 895436..953670 Organism: Escherichia coli strain EC18 Replicon: chromosome
Accession: NZ_CP060914 Location: 895436..953670 Organism: Escherichia coli strain EC18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9203_RS04390 (890585) | 890585..893677 | - | 3093 | WP_001082882.1 | beta-galactosidase subunit alpha | - |
| H9203_RS04395 (893860) | 893860..894843 | - | 984 | WP_000212470.1 | transcriptional regulator EbgR | - |
| H9203_RS04400 (895062) | 895062..895394 | + | 333 | WP_000450589.1 | tRNA-binding protein | - |
| H9203_RS04405 (895436) | 895436..896815 | - | 1380 | WP_001297164.1 | Putrescine aminotransferase | VF |
| H9203_RS04410 (897233) | 897233..898753 | + | 1521 | WP_000094682.1 | Aerotaxis receptor | VF |
| H9203_RS04415 (898907) | 898907..899530 | - | 624 | WP_000018003.1 | DNA-binding transcriptional regulator NfeR | - |
| H9203_RS04420 (899807) | 899807..900571 | + | 765 | WP_001065895.1 | NADPH-dependent ferric chelate reductase NfeF | - |
| H9203_RS04425 (900868) | 900868..902184 | + | 1317 | WP_000290290.1 | Prophage integrase IntA ; Integrase | Integrase |
| H9203_RS04430 (902314) | 902314..902910 | + | 597 | WP_000268404.1 | hypothetical protein | - |
| H9203_RS04435 (902993) | 902993..904597 | - | 1605 | WP_000256688.1 | hypothetical protein | - |
| H9203_RS04440 (905377) | 905377..905604 | + | 228 | WP_000265818.1 | AlpA family phage regulatory protein | - |
| H9203_RS04445 (905667) | 905667..906413 | + | 747 | WP_024201514.1 | hypothetical protein | - |
| H9203_RS04450 (906635) | 906635..907195 | + | 561 | WP_000135718.1 | hypothetical protein | - |
| H9203_RS04455 (907577) | 907577..908191 | + | 615 | WP_000628304.1 | inovirus Gp2 family protein | - |
| H9203_RS04460 (908219) | 908219..908785 | + | 567 | WP_000287905.1 | inovirus-type Gp2 protein | - |
| H9203_RS04470 (908992) | 908992..909978 | - | 987 | WP_001354443.1 | IS3 family transposase IS2 | Transposase |
| H9203_RS04475 (910058) | 910058..910762 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9203_RS04480 (911148) | 911148..911564 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| H9203_RS04485 (911569) | 911569..912087 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| H9203_RS04490 (912087) | 912087..912875 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| H9203_RS04495 (912895) | 912895..913320 | - | 426 | Protein_869 | TetR/AcrR family transcriptional regulator | - |
| H9203_RS04500 (913375) | 913375..914079 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9203_RS04505 (914148) | 914148..915326 | - | 1179 | WP_001065546.1 | GIY-YIG nuclease family protein | - |
| H9203_RS04510 (915319) | 915319..917364 | - | 2046 | WP_001060305.1 | DEAD/DEAH box helicase | - |
| H9203_RS04515 (917361) | 917361..919700 | - | 2340 | WP_241408373.1 | lactate dehydrogenase | - |
| H9203_RS04520 (919739) | 919739..920521 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| H9203_RS04525 (920518) | 920518..921540 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| H9203_RS04530 (921607) | 921607..922107 | - | 501 | WP_241408374.1 | hypothetical protein | - |
| H9203_RS04535 (922355) | 922355..922720 | + | 366 | Protein_877 | transposase | - |
| H9203_RS04540 (922860) | 922860..923279 | + | 420 | WP_032313936.1 | IS66 family transposase ISEc43 | Transposase |
| H9203_RS04545 (923276) | 923276..923350 | + | 75 | Protein_879 | IS66 family transposase ISEc47 | Transposase |
| H9203_RS04550 (923579) | 923579..923761 | - | 183 | WP_000282126.1 | hypothetical protein | - |
| H9203_RS04555 (924092) | 924092..924964 | + | 873 | WP_058343187.1 | GTPase family protein | - |
| H9203_RS04560 (925337) | 925337..928183 | + | 2847 | WP_040234914.1 | Ag43/Cah family autotransporter adhesin | - |
| H9203_RS04565 (928510) | 928510..929328 | + | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| H9203_RS04570 (929419) | 929419..929904 | + | 486 | WP_000214317.1 | antirestriction protein | - |
| H9203_RS04575 (929919) | 929919..930395 | + | 477 | WP_001186747.1 | RadC family protein | - |
| H9203_RS04580 (930464) | 930464..930685 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| H9203_RS04585 (930765) | 930765..931133 | + | 369 | WP_053271974.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| H9203_RS04590 (931223) | 931223..931606 | + | 384 | WP_000854822.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| H9203_RS04595 (931597) | 931597..932085 | + | 489 | WP_001177592.1 | DUF5983 family protein | - |
| H9203_RS04600 (932097) | 932097..932294 | + | 198 | WP_000839263.1 | DUF957 domain-containing protein | - |
| H9203_RS04605 (932391) | 932391..933236 | + | 846 | WP_040234917.1 | DUF4942 domain-containing protein | - |
| H9203_RS04615 (933535) | 933535..934041 | + | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| H9203_RS04620 (934119) | 934119..935960 | - | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| H9203_RS04625 (936155) | 936155..937900 | - | 1746 | WP_000918827.1 | DNA primase | - |
| H9203_RS04630 (938011) | 938011..938226 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| H9203_RS04635 (938463) | 938463..939476 | + | 1014 | WP_001264365.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| H9203_RS04640 (939519) | 939519..940982 | - | 1464 | WP_000804911.1 | L-tartrate/succinate antiporter | - |
| H9203_RS04645 (941031) | 941031..941636 | - | 606 | WP_000722962.1 | L(+)-tartrate dehydratase subunit beta | - |
| H9203_RS04650 (941633) | 941633..942544 | - | 912 | WP_000986797.1 | L(+)-tartrate dehydratase subunit alpha | - |
| H9203_RS04655 (942751) | 942751..943683 | + | 933 | WP_000935209.1 | DNA-binding transcriptional activator TtdR | - |
| H9203_RS04660 (943696) | 943696..944313 | - | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| H9203_RS04665 (944418) | 944418..944786 | + | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| H9203_RS04670 (944877) | 944877..945698 | + | 822 | WP_001305111.1 | undecaprenyl-diphosphate phosphatase | - |
| H9203_RS04675 (945861) | 945861..947099 | - | 1239 | WP_000708501.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| H9203_RS04680 (947163) | 947163..947783 | - | 621 | WP_001125332.1 | TIGR04211 family SH3 domain-containing protein | - |
| H9203_RS04685 (948025) | 948025..949326 | + | 1302 | WP_000046272.1 | inorganic triphosphatase | - |
| H9203_RS04690 (949349) | 949349..952189 | + | 2841 | WP_001298736.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| H9203_RS04695 (952237) | 952237..953670 | + | 1434 | WP_000869178.1 | Bifunctional protein HldE | VF |
| H9203_RS04700 (953790) | 953790..953849 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (953750) | 953750..953891 | + | 142 | NuclAT_3 | - | - |
| - (953750) | 953750..953891 | + | 142 | NuclAT_3 | - | - |
| - (953750) | 953750..953891 | + | 142 | NuclAT_3 | - | - |
| - (953750) | 953750..953891 | + | 142 | NuclAT_3 | - | - |
| H9203_RS04705 (954166) | 954166..954225 | - | 60 | WP_100249846.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_2 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_2 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_2 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_2 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_4 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_4 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_4 | - | - |
| - (954126) | 954126..954267 | + | 142 | NuclAT_4 | - | - |
| H9203_RS04710 (954464) | 954464..956125 | - | 1662 | WP_000341046.1 | flotillin family protein | - |
| H9203_RS04715 (956152) | 956152..956781 | - | 630 | WP_000599947.1 | DUF1449 family protein | - |
| H9203_RS04720 (957050) | 957050..957250 | + | 201 | WP_100729273.1 | cell surface composition regulator GlgS | - |
| H9203_RS04725 (957293) | 957293..958357 | - | 1065 | WP_001269793.1 | fimbrial protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|