MGE detailed information
MGE type: Conjugative plasmid MGE length: 86975 bp
Accession: NZ_CP060910 Location: 1..86975 Organism: Escherichia coli strain EC19 Replicon: plasmid pEC19-3
Accession: NZ_CP060910 Location: 1..86975 Organism: Escherichia coli strain EC19 Replicon: plasmid pEC19-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9204_RS24030 (1) | 1..1032 | + | 1032 | WP_024176529.1 | plasmid replication initiator RepA | - |
| H9204_RS24035 (1729) | 1729..1869 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| H9204_RS24040 (2102) | 2102..2611 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| H9204_RS24045 (2667) | 2667..3269 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| H9204_RS24050 (3928) | 3928..4625 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| H9204_RS24055 (4622) | 4622..5863 | + | 1242 | WP_114261015.1 | IS1380 family transposase ISEcp1 | Transposase |
| H9204_RS24060 (6119) | 6119..6994 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| H9204_RS24065 (7041) | 7041..7385 | - | 345 | Protein_7 | WbuC family cupin fold metalloprotein | - |
| H9204_RS24070 (7328) | 7328..8722 | + | 1395 | WP_023150520.1 | protein YagA | - |
| H9204_RS24075 (9245) | 9245..9547 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| H9204_RS24080 (9544) | 9544..10170 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| H9204_RS24085 (10366) | 10366..11637 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| H9204_RS24090 (11637) | 11637..12074 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9204_RS24095 (12071) | 12071..12319 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9204_RS24100 (12737) | 12737..13639 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| H9204_RS24105 (13643) | 13643..13729 | + | 87 | Protein_15 | hypothetical protein | - |
| H9204_RS24110 (13734) | 13734..14069 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| H9204_RS24115 (14407) | 14407..15387 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| H9204_RS24120 (15390) | 15390..15812 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| H9204_RS24125 (15816) | 15816..16127 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| H9204_RS24130 (16203) | 16203..16886 | + | 684 | WP_000086127.1 | DNA methylase | - |
| H9204_RS24135 (16887) | 16887..17108 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H9204_RS24140 (17038) | 17038..17556 | + | 519 | WP_223350510.1 | DUF1380 family protein | - |
| H9204_RS24145 (17601) | 17601..18371 | + | 771 | WP_012783922.1 | hypothetical protein | - |
| H9204_RS24150 (18784) | 18784..19209 | + | 426 | WP_001198889.1 | antirestriction protein | - |
| H9204_RS24155 (19256) | 19256..19678 | + | 423 | WP_000271703.1 | DUF1380 family protein | - |
| H9204_RS24160 (19675) | 19675..19866 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| H9204_RS24165 (20004) | 20004..20267 | + | 264 | WP_158213465.1 | hypothetical protein | - |
| H9204_RS24170 (20651) | 20651..21178 | + | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| H9204_RS24175 (21236) | 21236..21469 | + | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| H9204_RS24180 (21528) | 21528..23486 | + | 1959 | WP_063267868.1 | ParB/RepB/Spo0J family partition protein | - |
| H9204_RS24185 (23539) | 23539..23973 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| H9204_RS24190 (23970) | 23970..24689 | + | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| H9204_RS24195 (24686) | 24686..25282 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| H9204_RS24200 (25744) | 25744..26244 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| H9204_RS24205 (26973) | 26973..27407 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| H9204_RS24210 (27501) | 27501..27767 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| H9204_RS24215 (27944) | 27944..28333 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| H9204_RS24220 (28330) | 28330..29232 | + | 903 | WP_023150544.1 | Recombination-promoting nuclease RpnA | VF |
| H9204_RS24225 (29294) | 29294..29500 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| H9204_RS24230 (29531) | 29531..29782 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| H9204_RS24235 (30362) | 30362..31210 | + | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| H9204_RS24240 (31296) | 31296..31631 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9204_RS24245 (31865) | 31865..32197 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9204_RS24250 (32208) | 32208..34907 | + | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| H9204_RS24255 (34944) | 34944..37235 | - | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| H9204_RS24260 (37228) | 37228..38298 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9204_RS24265 (38317) | 38317..39525 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (39705) | 39705..39762 | - | 58 | NuclAT_1 | - | - |
| - (39705) | 39705..39762 | - | 58 | NuclAT_1 | - | - |
| - (39705) | 39705..39762 | - | 58 | NuclAT_1 | - | - |
| - (39705) | 39705..39762 | - | 58 | NuclAT_1 | - | - |
| H9204_RS24270 (39832) | 39832..40611 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (41126) | 41126..41186 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (41126) | 41126..41186 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (41126) | 41126..41186 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (41126) | 41126..41186 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| H9204_RS24275 (41238) | 41238..41390 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| H9204_RS24280 (41462) | 41462..41713 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| H9204_RS24945 (42214) | 42214..42309 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| H9204_RS24290 (42374) | 42374..42550 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| H9204_RS24295 (42942) | 42942..43151 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| H9204_RS24300 (43223) | 43223..43885 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9204_RS24305 (43956) | 43956..46124 | - | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| H9204_RS24310 (46221) | 46221..46805 | - | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| H9204_RS24315 (46834) | 46834..48036 | - | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| H9204_RS24320 (48003) | 48003..48617 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| H9204_RS24325 (48617) | 48617..51661 | - | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| H9204_RS24330 (51751) | 51751..52551 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| H9204_RS24335 (52535) | 52535..52723 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9204_RS24340 (52787) | 52787..53191 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| H9204_RS24345 (53242) | 53242..53769 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9204_RS24350 (53769) | 53769..54473 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| H9204_RS24355 (54473) | 54473..55762 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| H9204_RS24360 (55765) | 55765..56748 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| H9204_RS24365 (56759) | 56759..57451 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| H9204_RS24370 (57448) | 57448..57795 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9204_RS24375 (57813) | 57813..61579 | - | 3767 | Protein_69 | DUF5710 domain-containing protein | - |
| H9204_RS24380 (61669) | 61669..62220 | - | 552 | WP_012783942.1 | Phospholipase D | VF |
| H9204_RS24385 (62235) | 62235..62525 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| H9204_RS24390 (62522) | 62522..63670 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| H9204_RS24395 (63667) | 63667..64485 | - | 819 | WP_241414973.1 | hypothetical protein | VF |
| H9204_RS24400 (64482) | 64482..64940 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H9204_RS24405 (65334) | 65334..65918 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| H9204_RS24410 (65978) | 65978..67180 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| H9204_RS24415 (67266) | 67266..68090 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| H9204_RS24420 (68241) | 68241..69395 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| H9204_RS24425 (69394) | 69394..69747 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| H9204_RS24430 (70415) | 70415..70663 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| H9204_RS24435 (70660) | 70660..71952 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| H9204_RS24440 (71952) | 71952..72608 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| H9204_RS24445 (72593) | 72593..73153 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| H9204_RS24450 (73163) | 73163..73777 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| H9204_RS24455 (73795) | 73795..74892 | - | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9204_RS24460 (74905) | 74905..76458 | - | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9204_RS24465 (76469) | 76469..76921 | - | 453 | WP_012783945.1 | hypothetical protein | VF |
| H9204_RS24470 (76908) | 76908..78203 | - | 1296 | WP_012783946.1 | type 4b pilus protein PilO2 | - |
| H9204_RS24475 (78196) | 78196..79878 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H9204_RS24480 (79892) | 79892..80329 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| H9204_RS24485 (80329) | 80329..81396 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| H9204_RS24490 (82020) | 82020..82316 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| H9204_RS24495 (82483) | 82483..82737 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| H9204_RS24500 (82899) | 82899..83450 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| H9204_RS24505 (83623) | 83623..84306 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| H9204_RS24510 (84560) | 84560..85093 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| H9204_RS24515 (85535) | 85535..85822 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| H9204_RS24520 (85860) | 85860..86018 | - | 159 | Protein_98 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|