MGE detailed information
MGE type: Prophage MGE length: 41836 bp
Accession: NZ_CP060676 Location: 906678..948513 Organism: Salmonella enterica strain 190704_2 Replicon: chromosome
Accession: NZ_CP060676 Location: 906678..948513 Organism: Salmonella enterica strain 190704_2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q83_RS04775 () | 901835..903274 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| H9Q83_RS04780 () | 903392..903628 | + | 237 | WP_024131108.1 | YebV family protein | - |
| H9Q83_RS04785 () | 903739..903930 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| H9Q83_RS04790 () | 903949..904599 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| H9Q83_RS04795 () | 904823..904987 | - | 165 | WP_001134856.1 | membrane protein | - |
| H9Q83_RS04800 () | 905272..905994 | - | 723 | WP_000182071.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| H9Q83_RS04805 () | 906678..907073 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| H9Q83_RS04810 () | 907403..907879 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| H9Q83_RS04815 () | 908252..908671 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| H9Q83_RS04820 () | 909044..909313 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| H9Q83_RS04825 () | 909479..909619 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| H9Q83_RS04830 () | 909765..910972 | - | 1208 | Protein_946 | IS256 family transposase ISEc39 | Transposase |
| H9Q83_RS04835 () | 911042..911508 | + | 467 | Protein_947 | tyrosine-type recombinase/integrase | - |
| H9Q83_RS04840 () | 911940..912158 | - | 219 | WP_000224024.1 | hypothetical protein | - |
| H9Q83_RS04845 () | 912758..913672 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| H9Q83_RS04850 () | 913805..913963 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| H9Q83_RS04855 () | 913973..914587 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| H9Q83_RS04860 () | 914914..915146 | - | 233 | Protein_952 | helix-turn-helix domain-containing protein | - |
| H9Q83_RS04865 () | 915755..915856 | - | 102 | Protein_953 | arsenic transporter | - |
| H9Q83_RS04870 () | 915847..916027 | + | 181 | Protein_954 | IS3 family transposase | - |
| H9Q83_RS04875 () | 916417..916617 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| H9Q83_RS04880 () | 916714..917225 | - | 512 | Protein_956 | tail fiber assembly protein | - |
| H9Q83_RS04885 () | 917238..917525 | - | 288 | Protein_957 | macro domain-containing protein | - |
| H9Q83_RS04890 () | 917535..918766 | - | 1232 | Protein_958 | tail fiber protein | - |
| H9Q83_RS04895 () | 918765..919332 | - | 568 | Protein_959 | phage terminase large subunit family protein | - |
| H9Q83_RS04900 () | 919319..919810 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| H9Q83_RS04905 () | 919865..920053 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| H9Q83_RS04910 () | 920118..920285 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| H9Q83_RS04915 () | 920542..921075 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| H9Q83_RS04920 () | 921129..921320 | - | 192 | Protein_964 | glycoside hydrolase family 19 protein | - |
| H9Q83_RS04925 () | 921309..921770 | + | 462 | Protein_965 | DNA breaking-rejoining protein | - |
| H9Q83_RS04930 () | 922034..922956 | + | 923 | Protein_966 | hypothetical protein ; Integrase | Integrase |
| H9Q83_RS04935 () | 923901..924701 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| H9Q83_RS04940 () | 924730..924971 | - | 242 | Protein_968 | recombinase family protein | - |
| H9Q83_RS04945 () | 925181..925903 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| H9Q83_RS04950 () | 926105..926449 | - | 345 | Protein_970 | tail fiber assembly protein | - |
| H9Q83_RS04955 () | 926454..927317 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| H9Q83_RS04960 () | 927357..929688 | - | 2332 | Protein_972 | host specificity protein J | - |
| H9Q83_RS04965 () | 929688..929948 | - | 261 | Protein_973 | C40 family peptidase | - |
| H9Q83_RS04970 () | 929958..930653 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| H9Q83_RS04975 () | 930743..931276 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| H9Q83_RS04980 () | 931393..931572 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9Q83_RS04985 () | 931652..931963 | - | 312 | Protein_977 | DUF1441 family protein | - |
| H9Q83_RS04990 () | 932171..932650 | - | 480 | WP_001541990.1 | lysis protein | - |
| H9Q83_RS04995 () | 932668..933120 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| H9Q83_RS05000 () | 933104..933433 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| H9Q83_RS05005 () | 933709..934395 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| H9Q83_RS05010 () | 934756..935205 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| H9Q83_RS05015 () | 935579..936106 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| H9Q83_RS05020 () | 936200..936889 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| H9Q83_RS05025 () | 936886..937022 | - | 137 | Protein_985 | YlcG family protein | - |
| H9Q83_RS05030 () | 937019..937159 | - | 141 | Protein_986 | recombination protein NinG | - |
| H9Q83_RS05035 () | 937243..937842 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| H9Q83_RS05040 () | 937906..938124 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| H9Q83_RS05045 () | 938426..938524 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| H9Q83_RS05050 () | 938843..940822 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| H9Q83_RS05055 () | 941236..941514 | + | 279 | WP_001575998.1 | excisionase | - |
| H9Q83_RS05060 () | 941489..942568 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 942706..942851 | + | 146 | - | - | Antitoxin Detail |
| - | 942708..942811 | - | 104 | - | - | Toxin Detail |
| H9Q83_RS05065 () | 942951..943304 | - | 354 | WP_000722370.1 | YebY family protein | - |
| H9Q83_RS05070 () | 943321..944196 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| H9Q83_RS05075 () | 944197..944571 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| H9Q83_RS05080 () | 944709..944939 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| H9Q83_RS05085 () | 945047..945703 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| H9Q83_RS05090 () | 945727..946425 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| H9Q83_RS05095 () | 946462..948513 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| H9Q83_RS05100 () | 948726..949385 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| H9Q83_RS05105 () | 949479..949832 | - | 354 | WP_001042123.1 | protein YebF | - |
| H9Q83_RS05110 () | 949900..950190 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| H9Q83_RS05115 () | 950321..951499 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| H9Q83_RS05120 () | 951599..952240 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|