MGE detailed information
MGE type: Prophage MGE length: 75915 bp
Accession: NZ_CP060672 Location: 2159936..2235850 Organism: Salmonella enterica strain 190729_8 Replicon: chromosome
Accession: NZ_CP060672 Location: 2159936..2235850 Organism: Salmonella enterica strain 190729_8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q85_RS10260 () | 2155674..2156126 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| H9Q85_RS10265 () | 2156156..2156896 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| H9Q85_RS10270 () | 2156933..2157454 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| H9Q85_RS10275 () | 2157456..2158055 | - | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| H9Q85_RS10280 () | 2158264..2158956 | + | 693 | WP_001680382.1 | hypothetical protein | - |
| H9Q85_RS10285 () | 2159316..2159927 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| H9Q85_RS10290 () | 2159936..2160946 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| H9Q85_RS10295 () | 2161025..2161810 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| H9Q85_RS10300 () | 2161807..2162562 | - | 756 | WP_000203023.1 | hypothetical protein | VF |
| H9Q85_RS10305 () | 2162641..2163585 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| H9Q85_RS10310 () | 2163601..2164920 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| H9Q85_RS10315 () | 2165037..2166008 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| H9Q85_RS10320 () | 2166081..2167523 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| H9Q85_RS10325 () | 2167647..2168516 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| H9Q85_RS10330 () | 2168858..2170333 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| H9Q85_RS10335 () | 2170568..2172379 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| H9Q85_RS10340 () | 2172417..2173058 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| H9Q85_RS10345 () | 2173158..2174336 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| H9Q85_RS10350 () | 2174467..2174757 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| H9Q85_RS10355 () | 2174825..2175178 | + | 354 | WP_001042123.1 | protein YebF | - |
| H9Q85_RS10360 () | 2175272..2175931 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| H9Q85_RS10365 () | 2176144..2178195 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| H9Q85_RS10370 () | 2178232..2178930 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| H9Q85_RS10375 () | 2178954..2179610 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| H9Q85_RS10380 () | 2179718..2179948 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| H9Q85_RS10385 () | 2180086..2180460 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| H9Q85_RS10390 () | 2180461..2181336 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| H9Q85_RS10395 () | 2181353..2181706 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 2181806..2181951 | - | 146 | - | - | Antitoxin Detail |
| - | 2181846..2181949 | + | 104 | - | - | Toxin Detail |
| H9Q85_RS10400 () | 2182089..2183168 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| H9Q85_RS10405 () | 2183143..2183421 | - | 279 | WP_001575998.1 | excisionase | - |
| H9Q85_RS10410 () | 2183835..2185814 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| H9Q85_RS10415 () | 2186133..2186231 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| H9Q85_RS10420 () | 2186533..2186751 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| H9Q85_RS10425 () | 2186815..2187414 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| H9Q85_RS10430 () | 2187498..2187638 | + | 141 | Protein_2019 | recombination protein NinG | - |
| H9Q85_RS10435 () | 2187635..2187771 | + | 137 | Protein_2020 | YlcG family protein | - |
| H9Q85_RS10440 () | 2187768..2188457 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| H9Q85_RS10445 () | 2188551..2189078 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| H9Q85_RS10450 () | 2189452..2189901 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| H9Q85_RS10455 () | 2190262..2190948 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| H9Q85_RS10460 () | 2191224..2191553 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| H9Q85_RS10465 () | 2191537..2191989 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| H9Q85_RS10470 () | 2192007..2192486 | + | 480 | WP_001541990.1 | lysis protein | - |
| H9Q85_RS10475 () | 2192694..2193005 | + | 312 | Protein_2028 | DUF1441 family protein | - |
| H9Q85_RS10480 () | 2193085..2193264 | + | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9Q85_RS10485 () | 2193381..2193914 | - | 534 | WP_000877926.1 | hypothetical protein | VF |
| H9Q85_RS10490 () | 2194004..2194699 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| H9Q85_RS10495 () | 2194709..2194969 | + | 261 | Protein_2032 | C40 family peptidase | - |
| H9Q85_RS10500 () | 2194969..2197300 | + | 2332 | Protein_2033 | host specificity protein J | - |
| H9Q85_RS10505 () | 2197370..2198203 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| H9Q85_RS10510 () | 2198208..2198552 | + | 345 | Protein_2035 | tail fiber assembly protein | - |
| H9Q85_RS10515 () | 2198754..2199476 | - | 723 | WP_000161704.1 | hypothetical protein | VF |
| H9Q85_RS10520 () | 2199686..2199927 | + | 242 | Protein_2037 | recombinase family protein | - |
| H9Q85_RS10525 () | 2199956..2200756 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| H9Q85_RS10530 () | 2201701..2202623 | - | 923 | Protein_2039 | hypothetical protein ; Integrase | Integrase |
| H9Q85_RS10535 () | 2202887..2203348 | - | 462 | Protein_2040 | DNA breaking-rejoining protein | - |
| H9Q85_RS10540 () | 2203337..2203528 | + | 192 | Protein_2041 | glycoside hydrolase family 19 protein | - |
| H9Q85_RS10545 () | 2203582..2204115 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| H9Q85_RS10550 () | 2204372..2204539 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| H9Q85_RS10555 () | 2204604..2204792 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| H9Q85_RS10560 () | 2204847..2205338 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| H9Q85_RS10565 () | 2205325..2205892 | + | 568 | Protein_2046 | phage terminase large subunit family protein | - |
| H9Q85_RS10570 () | 2205891..2207122 | + | 1232 | Protein_2047 | tail fiber protein | - |
| H9Q85_RS10575 () | 2207132..2207419 | + | 288 | Protein_2048 | macro domain-containing protein | - |
| H9Q85_RS10580 () | 2207432..2207943 | + | 512 | Protein_2049 | tail fiber assembly protein | - |
| H9Q85_RS10585 () | 2208040..2208240 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| H9Q85_RS10590 () | 2208630..2208810 | - | 181 | Protein_2051 | IS3 family transposase | - |
| H9Q85_RS10595 () | 2208801..2208902 | + | 102 | Protein_2052 | arsenic transporter | - |
| H9Q85_RS10600 () | 2209511..2209743 | + | 233 | Protein_2053 | helix-turn-helix domain-containing protein | - |
| H9Q85_RS10605 () | 2210070..2210684 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| H9Q85_RS10610 () | 2210694..2210852 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| H9Q85_RS10615 () | 2210985..2211899 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| H9Q85_RS10620 () | 2213149..2213615 | - | 467 | Protein_2057 | tyrosine-type recombinase/integrase | - |
| H9Q85_RS10625 () | 2213685..2214892 | + | 1208 | Protein_2058 | IS256 family transposase ISEc39 | Transposase |
| H9Q85_RS10630 () | 2215038..2215178 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| H9Q85_RS10635 () | 2215344..2215613 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| H9Q85_RS10640 () | 2215986..2216405 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| H9Q85_RS10645 () | 2216778..2217254 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| H9Q85_RS10650 () | 2217584..2217979 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| H9Q85_RS10655 () | 2218663..2219385 | + | 723 | WP_000182071.1 | hypothetical protein | VF |
| H9Q85_RS10660 () | 2219670..2219834 | + | 165 | WP_001134856.1 | membrane protein | - |
| H9Q85_RS10665 () | 2220058..2220708 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| H9Q85_RS10670 () | 2220727..2220918 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| H9Q85_RS10675 () | 2221029..2221265 | - | 237 | WP_024131108.1 | YebV family protein | - |
| H9Q85_RS10680 () | 2221383..2222822 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| H9Q85_RS10685 () | 2222900..2225533 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| H9Q85_RS10690 () | 2225502..2226785 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| H9Q85_RS10695 () | 2226914..2227411 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| H9Q85_RS10700 () | 2227509..2228195 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| H9Q85_RS10705 () | 2228215..2230263 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| H9Q85_RS10710 () | 2230457..2231338 | + | 882 | WP_000984498.1 | protease HtpX | - |
| H9Q85_RS10715 () | 2231386..2232759 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| H9Q85_RS10720 () | 2232935..2233726 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| H9Q85_RS10725 () | 2233938..2234177 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| H9Q85_RS10730 () | 2234335..2234478 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| H9Q85_RS10735 () | 2234549..2234836 | + | 288 | WP_001000660.1 | YebO family protein | - |
| H9Q85_RS10740 () | 2235485..2235628 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| H9Q85_RS10745 () | 2235641..2235850 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| H9Q85_RS10750 () | 2236070..2237815 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| H9Q85_RS10755 () | 2237881..2238690 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| H9Q85_RS10760 () | 2238687..2239253 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| H9Q85_RS10765 () | 2239663..2240121 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|