MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 63921 bp
Accession: NZ_CP060003 Location: 1..63921 Organism: Xanthomonas citri pv. citri strain SN3-3 Replicon: plasmid pSN3-3
Accession: NZ_CP060003 Location: 1..63921 Organism: Xanthomonas citri pv. citri strain SN3-3 Replicon: plasmid pSN3-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS91_RS22125 (HZS91_05001) | 12..1586 | - | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HZS91_RS22130 (HZS91_05002) | 1845..2186 | - | 342 | WP_031425612.1 | hypothetical protein | - |
| HZS91_RS22135 (HZS91_05003) | 2385..2735 | - | 351 | WP_015462612.1 | hypothetical protein | - |
| HZS91_RS22140 (HZS91_05005) | 3052..3347 | + | 296 | Protein_3 | transposase | - |
| HZS91_RS22145 | 3439..3612 | - | 174 | Protein_4 | hypothetical protein | - |
| HZS91_RS22150 (HZS91_05006) | 3612..4007 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| HZS91_RS22155 (HZS91_05007) | 4355..4801 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| HZS91_RS22160 (HZS91_05008) | 4798..5507 | + | 710 | Protein_7 | StbB family protein | - |
| HZS91_RS22165 (HZS91_05009) | 5556..5909 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| HZS91_RS22170 (HZS91_05010) | 6304..6513 | - | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| HZS91_RS22175 (HZS91_05011) | 6510..6818 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| HZS91_RS22180 (HZS91_05013) | 7274..7900 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| HZS91_RS22185 (HZS91_05014) | 7897..8220 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| HZS91_RS22190 (HZS91_05015) | 8365..8679 | + | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| HZS91_RS22195 (HZS91_05016) | 8927..10147 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| HZS91_RS22200 | 10513..13749 | - | 3237 | Protein_15 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS91_RS22205 (HZS91_05020) | 15108..16184 | - | 1077 | WP_040107542.1 | XopE/AvrPphe family type III secretion system effector | - |
| HZS91_RS22210 (HZS91_05022) | 16317..17372 | - | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| HZS91_RS22215 (HZS91_05023) | 17565..18839 | + | 1275 | Protein_18 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| HZS91_RS22220 (HZS91_05024) | 18848..21838 | + | 2991 | WP_219875425.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| HZS91_RS22225 (HZS91_05025) | 21971..23248 | + | 1278 | WP_047930046.1 | lytic murein transglycosylase | - |
| HZS91_RS22230 (HZS91_05026) | 23291..23635 | + | 345 | WP_075150220.1 | hypothetical protein | - |
| HZS91_RS22235 (HZS91_05027) | 23763..24257 | - | 495 | Protein_22 | hypothetical protein | - |
| HZS91_RS22240 (HZS91_05028) | 24254..24859 | - | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| HZS91_RS22245 (HZS91_05029) | 24856..25305 | - | 450 | WP_015462602.1 | hypothetical protein | - |
| HZS91_RS22250 (HZS91_05030) | 25632..26231 | - | 600 | WP_015462601.1 | hypothetical protein | - |
| HZS91_RS22255 (HZS91_05031) | 26378..26707 | + | 330 | WP_005918642.1 | hypothetical protein | - |
| HZS91_RS22260 (HZS91_05032) | 26757..26963 | + | 207 | WP_011052961.1 | hypothetical protein | - |
| HZS91_RS22265 (HZS91_05033) | 27017..27433 | + | 417 | WP_087962480.1 | transposase | - |
| HZS91_RS22270 | 27564..27746 | - | 183 | Protein_29 | helix-turn-helix domain-containing protein | - |
| HZS91_RS22275 (HZS91_05035) | 27790..28713 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS91_RS22280 (HZS91_05036) | 28927..29166 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS91_RS22285 (HZS91_05037) | 29166..29585 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS91_RS22290 (HZS91_05038) | 29590..32565 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS91_RS22295 (HZS91_05039) | 32584..33282 | + | 699 | WP_015462628.1 | YecA family protein | - |
| HZS91_RS22300 (HZS91_05040) | 33327..33458 | + | 132 | Protein_35 | IS3 family transposase | - |
| HZS91_RS22305 (HZS91_05041) | 33572..37062 | - | 3491 | Protein_36 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS91_RS22310 (HZS91_05045) | 38616..39203 | + | 588 | Protein_37 | IS3 family transposase ISXac3 | Transposase |
| HZS91_RS22315 (HZS91_05046) | 39234..39806 | - | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| HZS91_RS22320 (HZS91_05048) | 39997..40257 | + | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HZS91_RS22325 (HZS91_05049) | 40254..40655 | + | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZS91_RS22330 (HZS91_05050) | 40680..40943 | + | 264 | WP_005917846.1 | hypothetical protein | - |
| HZS91_RS22335 (HZS91_05051) | 40950..42137 | + | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| HZS91_RS22340 (HZS91_05052) | 42417..43643 | + | 1227 | WP_015472949.1 | replication protein RepA | - |
| HZS91_RS22345 (HZS91_05054) | 44448..45215 | + | 768 | WP_011052998.1 | ParA family protein | - |
| HZS91_RS22350 (HZS91_05055) | 45229..46260 | + | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| HZS91_RS22355 (HZS91_05056) | 46312..46641 | + | 330 | WP_011052996.1 | TrfB-related DNA-binding protein | - |
| HZS91_RS22360 (HZS91_05057) | 46645..46881 | + | 237 | WP_219875421.1 | hypothetical protein | - |
| HZS91_RS22365 (HZS91_05058) | 46996..48083 | + | 1088 | WP_219875423.1 | IS3 family transposase ISXac2 | Transposase |
| HZS91_RS22370 | 48248..48463 | - | 216 | WP_155400515.1 | hypothetical protein | - |
| HZS91_RS22375 (HZS91_05060) | 48776..49066 | + | 291 | WP_003490957.1 | hypothetical protein | - |
| HZS91_RS22380 (HZS91_05061) | 49087..49464 | + | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| HZS91_RS22385 (HZS91_05062) | 49461..49760 | + | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| HZS91_RS22390 (HZS91_05063) | 49783..52416 | + | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| HZS91_RS22395 (HZS91_05064) | 52413..53081 | + | 669 | WP_015462618.1 | type IV secretion system protein | - |
| HZS91_RS22400 (HZS91_05065) | 53129..53341 | + | 213 | WP_015462617.1 | hypothetical protein | - |
| HZS91_RS22405 (HZS91_05066) | 53334..53714 | + | 381 | WP_015462616.1 | hypothetical protein | - |
| HZS91_RS22410 (HZS91_05067) | 53716..54582 | + | 867 | WP_011052987.1 | type IV secretion system protein | - |
| HZS91_RS22415 (HZS91_05068) | 54579..55253 | + | 675 | WP_011052986.1 | type IV secretion system protein | - |
| HZS91_RS22420 (HZS91_05069) | 55278..56060 | + | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| HZS91_RS22425 (HZS91_05070) | 56062..57282 | + | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| HZS91_RS22430 (HZS91_05071) | 57293..58315 | + | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| HZS91_RS22435 (HZS91_05072) | 58326..59204 | + | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| HZS91_RS22440 (HZS91_05073) | 59330..59749 | + | 420 | WP_011052981.1 | hypothetical protein | - |
| HZS91_RS22445 (HZS91_05074) | 59826..60212 | + | 387 | WP_003491149.1 | hypothetical protein | - |
| HZS91_RS22450 (HZS91_05075) | 60397..60567 | + | 171 | WP_017157755.1 | antitoxin MazE family protein | - |
| HZS91_RS22455 (HZS91_05076) | 60564..60890 | + | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| HZS91_RS22460 (HZS91_05077) | 60944..63919 | - | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|