NZ_CP0598491930679..2015420

MGE detailed information

MGE type: Prophage        MGE length: 84742 bp
Accession: NZ_CP059849        Location: 1930679..2015420         Organism: Citrobacter freundii strain 3863       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
H4O05_RS09105 () 1926171..1926737 + 567 WP_003034677.1 VOC family protein -
H4O05_RS09110 () 1926740..1927486 + 747 WP_016150525.1 copper homeostasis protein CutC -
H4O05_RS09115 () 1927730..1928698 - 969 WP_185228647.1 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB -
H4O05_RS09120 () 1928695..1929438 - 744 WP_003034686.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
H4O05_RS09125 () 1929479..1929874 - 396 WP_003034689.1 MAPEG family protein -
H4O05_RS09130 () 1929927..1930700 - 774 WP_164850799.1 DUF72 domain-containing protein -
H4O05_RS09135 () 1930679..1931992 - 1314 WP_185228648.1 Tyrosine recombinase XerD ; Integrase Integrase
H4O05_RS09140 () 1932051..1932287 - 237 WP_003839185.1 excisionase family protein -
H4O05_RS09145 () 1932328..1932897 - 570 WP_185228649.1 3'-5' exonuclease -
H4O05_RS09150 () 1932899..1933567 - 669 WP_221629019.1 hypothetical protein -
H4O05_RS09155 () 1933843..1934040 - 198 WP_242188188.1 hypothetical protein -
H4O05_RS09160 () 1934048..1934392 - 345 WP_072667373.1 hypothetical protein -
H4O05_RS09165 () 1934389..1934643 - 255 WP_049015418.1 hypothetical protein -
H4O05_RS09170 () 1934640..1934816 - 177 WP_170855027.1 hypothetical protein -
H4O05_RS09175 () 1934804..1935343 - 540 WP_072667372.1 hypothetical protein -
H4O05_RS09180 () 1935451..1936368 - 918 WP_185228651.1 recombination-associated protein RdgC -
H4O05_RS09185 () 1937412..1938104 - 693 WP_110497677.1 helix-turn-helix transcriptional regulator -
H4O05_RS09190 () 1938202..1938447 + 246 WP_185228652.1 helix-turn-helix transcriptional regulator -
H4O05_RS09195 () 1938458..1939009 + 552 WP_048216423.1 YmfL family putative regulatory protein -
H4O05_RS09200 () 1939182..1939361 + 180 WP_003034732.1 DUF4222 domain-containing protein -
H4O05_RS09205 () 1939351..1940208 + 858 WP_185228653.1 conserved phage C-terminal domain-containing protein -
H4O05_RS09210 () 1940205..1941527 + 1323 WP_185228654.1 phage N-6-adenine-methyltransferase -
H4O05_RS09215 () 1941520..1943517 + 1998 WP_185228655.1 DNA cytosine methyltransferase -
H4O05_RS09220 () 1943514..1943900 + 387 WP_003034741.1 RusA family crossover junction endodeoxyribonuclease -
H4O05_RS09225 () 1943914..1944597 + 684 WP_185228656.1 DNA-binding protein -
H4O05_RS09230 () 1944594..1945589 + 996 WP_185228657.1 DUF968 domain-containing protein -
H4O05_RS09235 () 1945606..1946436 + 831 WP_185228658.1 antitermination protein -
H4O05_RS09240 () 1946624..1946866 + 243 WP_075551253.1 hypothetical protein -
H4O05_RS09245 () 1947113..1947445 + 333 WP_127649219.1 phage holin, lambda family -
H4O05_RS09250 () 1947429..1947917 + 489 WP_048240885.1 TIGR02594 family protein -
H4O05_RS09255 () 1947914..1948477 + 564 WP_080398151.1 hypothetical protein -
H4O05_RS09260 () 1948856..1949557 + 702 WP_224774996.1 Fur-regulated protein -
H4O05_RS09265 () 1949573..1949806 + 234 WP_121581705.1 hypothetical protein -
H4O05_RS09270 () 1949794..1949889 + 96 Protein_1812 HNH endonuclease -
H4O05_RS09275 () 1950182..1950523 + 342 WP_104651449.1 HNH endonuclease signature motif containing protein -
H4O05_RS09280 () 1950643..1951107 + 465 WP_046671192.1 phage terminase small subunit P27 family -
H4O05_RS09285 () 1951061..1952803 + 1743 WP_185228659.1 terminase large subunit -
H4O05_RS09290 () 1952803..1954110 + 1308 WP_185228660.1 phage portal protein -
H4O05_RS09295 () 1954123..1954977 + 855 WP_185228661.1 Clp protease ClpP -
H4O05_RS09300 () 1954988..1956205 + 1218 WP_046671188.1 phage major capsid protein -
H4O05_RS09305 () 1956248..1956508 + 261 WP_185228662.1 hypothetical protein VF
H4O05_RS09310 () 1956508..1956834 + 327 WP_185228663.1 head-tail connector protein -
H4O05_RS09315 () 1956898..1957110 + 213 WP_087051098.1 hypothetical protein -
H4O05_RS09320 () 1957112..1957444 + 333 WP_087051099.1 phage head closure protein -
H4O05_RS09325 () 1957437..1957976 + 540 WP_087051100.1 HK97 gp10 family phage protein -
H4O05_RS09330 () 1957973..1958338 + 366 WP_003841715.1 DUF3168 domain-containing protein -
H4O05_RS09335 () 1958398..1958889 + 492 WP_103848985.1 phage tail tube protein -
H4O05_RS09340 () 1958942..1959322 + 381 WP_003841709.1 phage tail assembly chaperone family protein, TAC -
H4O05_RS09345 () 1959433..1959609 + 177 WP_221629020.1 hypothetical protein -
H4O05_RS09350 () 1959672..1960391 + 720 WP_077224034.1 zinc ribbon domain-containing protein -
H4O05_RS09355 () 1960466..1962940 + 2475 WP_185228664.1 phage tail tape measure protein -
H4O05_RS09360 () 1963007..1963225 - 219 WP_172693154.1 hypothetical protein -
H4O05_RS09365 () 1963311..1963904 + 594 WP_185228665.1 hypothetical protein -
H4O05_RS09370 () 1963904..1964488 + 585 WP_038642083.1 hypothetical protein -
H4O05_RS09375 () 1964495..1964893 + 399 WP_185228666.1 hypothetical protein -
H4O05_RS09380 () 1964893..1967607 + 2715 WP_185228667.1 DUF1983 domain-containing protein -
H4O05_RS09385 () 1967607..1968551 + 945 WP_185228668.1 DUF6453 family protein -
H4O05_RS09390 () 1968561..1969982 + 1422 WP_185228669.1 phage tail protein -
H4O05_RS09395 () 1970121..1970363 - 243 WP_000497432.1 DinI family protein -
H4O05_RS09400 () 1970442..1970774 + 333 WP_003841689.1 hypothetical protein -
H4O05_RS09405 () 1970966..1971376 + 411 WP_071701222.1 hemerythrin domain-containing protein -
H4O05_RS09410 () 1971462..1971701 - 240 WP_000497460.1 DinI family protein -
H4O05_RS09415 () 1971963..1972058 - 96 Protein_1841 hypothetical protein -
H4O05_RS09420 () 1972055..1972621 - 567 WP_003841685.1 hydrolase -
H4O05_RS09425 () 1972888..1974660 + 1773 WP_003034862.1 aspartate--tRNA ligase -
H4O05_RS09430 () 1974662..1975105 + 444 WP_003034863.1 dihydroneopterin triphosphate diphosphatase -
H4O05_RS09435 () 1975134..1975877 + 744 WP_003034865.1 transcriptional regulatory protein YebC VF
H4O05_RS09440 () 1975912..1976433 + 522 WP_048232240.1 crossover junction endodeoxyribonuclease RuvC -
H4O05_RS09445 () 1976434..1977036 - 603 WP_048232238.1 YebB family permuted papain-like enzyme -
H4O05_RS09450 () 1977301..1978197 - 897 WP_087878987.1 DUF4034 domain-containing protein -
H4O05_RS09455 () 1978594..1978794 - 201 WP_048232235.1 hypothetical protein -
H4O05_RS09460 () 1978863..1979474 + 612 WP_003844153.1 Holliday junction branch migration protein RuvA -
H4O05_RS09465 () 1979483..1980493 + 1011 WP_003034872.1 Holliday junction branch migration DNA helicase RuvB -
H4O05_RS09470 () 1980572..1981357 - 786 WP_003034874.1 hypothetical protein VF
H4O05_RS09475 () 1981354..1982109 - 756 WP_003034877.1 Vitamin B12 import ATP-binding protein BtuD VF
H4O05_RS09480 () 1982188..1983132 + 945 WP_049002353.1 zinc ABC transporter substrate-binding protein ZnuA -
H4O05_RS09485 () 1983148..1984467 + 1320 WP_003034883.1 murein DD-endopeptidase MepM -
H4O05_RS09490 () 1984587..1985558 + 972 WP_003841672.1 Lipid A biosynthesis myristoyltransferase VF
H4O05_RS09495 () 1985602..1987044 - 1443 WP_003034890.1 pyruvate kinase -
H4O05_RS09500 () 1987163..1988032 - 870 WP_003034893.1 MurR/RpiR family transcriptional regulator -
H4O05_RS09505 () 1988400..1989875 + 1476 WP_003034896.1 glucose-6-phosphate dehydrogenase -
H4O05_RS09510 () 1990109..1991920 + 1812 WP_003841668.1 phosphogluconate dehydratase -
H4O05_RS09515 () 1991955..1992596 + 642 WP_185228670.1 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase -
H4O05_RS09520 () 1992664..1993842 - 1179 WP_048232229.1 formate-dependent phosphoribosylglycinamide formyltransferase -
H4O05_RS09525 () 1993974..1994264 + 291 WP_003034906.1 DNA damage-inducible protein YebG -
H4O05_RS09530 () 1994386..1994739 + 354 WP_003034909.1 protein YebF -
H4O05_RS09535 () 1994834..1995493 + 660 WP_087878961.1 tellurite resistance TerB family protein -
H4O05_RS09540 () 1995580..1997634 + 2055 WP_174775182.1 oligopeptidase B -
H4O05_RS09545 () 1997625..1998287 - 663 WP_003841659.1 exodeoxyribonuclease X -
H4O05_RS09550 () 1998311..1998967 - 657 WP_046671220.1 carbon-nitrogen hydrolase family protein -
H4O05_RS09555 () 1999074..1999304 - 231 WP_003034925.1 DNA polymerase III subunit theta -
H4O05_RS09560 () 1999448..1999822 + 375 WP_003034928.1 CopC domain-containing protein YobA -
H4O05_RS09565 () 1999826..2000698 + 873 WP_032935389.1 copper homeostasis membrane protein CopD -
H4O05_RS09570 () 2000719..2001057 + 339 WP_003034934.1 YebY family protein -
- 2001178..2001321 - 144 - - Antitoxin Detail
- 2001213..2001316 + 104 - - Toxin Detail
H4O05_RS09575 () 2001470..2002111 + 642 WP_003034937.1 protein-serine/threonine phosphatase -
H4O05_RS09580 () 2002112..2002303 - 192 WP_003034941.1 YebW family protein -
H4O05_RS09585 () 2002406..2002642 - 237 WP_029139506.1 YebV family protein -
H4O05_RS09590 () 2002743..2004131 - 1389 WP_061548593.1 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF -
H4O05_RS09595 () 2004244..2006877 - 2634 WP_003034947.1 hypothetical protein VF
H4O05_RS09600 () 2006846..2008129 - 1284 WP_003841983.1 membrane integrity lipid transport subunit YebS -
H4O05_RS09605 () 2008258..2008755 + 498 WP_003034953.1 GAF domain-containing protein -
H4O05_RS09610 () 2008852..2009538 + 687 WP_003034957.1 RNA chaperone ProQ -
H4O05_RS09615 () 2009558..2011606 + 2049 WP_003034960.1 carboxy terminal-processing peptidase -
H4O05_RS09620 () 2011799..2012680 + 882 WP_003034964.1 protease HtpX -
H4O05_RS09625 () 2012727..2014100 - 1374 WP_185228671.1 MFS transporter -
H4O05_RS09630 () 2014275..2015066 + 792 WP_003833778.1 DNA-binding transcriptional regulator KdgR -
H4O05_RS09635 () 2015181..2015420 - 240 WP_003841988.1 YobH family protein -
H4O05_RS09640 () 2015585..2015728 + 144 WP_003034977.1 PhoP/PhoQ regulator MgrB -
H4O05_RS09645 () 2015803..2016087 + 285 WP_003841991.1 YebO family protein -
H4O05_RS09650 () 2016724..2016867 + 144 WP_003034983.1 DUF2627 domain-containing protein -
H4O05_RS09655 () 2016880..2017089 + 210 WP_001062678.1 transcription antiterminator/RNA stability regulator CspE -
H4O05_RS09660 () 2017309..2019054 + 1746 WP_103798130.1 peptidoglycan glycosyltransferase FtsI -
H4O05_RS09665 () 2019118..2019927 + 810 WP_003841628.1 23S rRNA (guanine(745)-N(1))-methyltransferase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance