MGE detailed information
MGE type: Prophage MGE length: 76244 bp
Accession: NZ_CP059840 Location: 2984845..3061088 Organism: Escherichia coli strain E2348/69 Replicon: chromosome
Accession: NZ_CP059840 Location: 2984845..3061088 Organism: Escherichia coli strain E2348/69 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4J01_RS15025 () | 2980079..2981017 | - | 939 | WP_000351277.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| H4J01_RS15035 () | 2981487..2982329 | - | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| H4J01_RS15040 () | 2982414..2982611 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| H4J01_RS15045 () | 2982623..2983114 | - | 492 | WP_000976857.1 | hypothetical protein | - |
| H4J01_RS15050 () | 2983111..2983485 | - | 375 | WP_000854914.1 | TA system toxin CbtA family protein | - |
| H4J01_RS15055 () | 2983532..2983906 | - | 375 | WP_001280955.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| H4J01_RS15060 () | 2984069..2984290 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| H4J01_RS15065 () | 2984353..2984829 | - | 477 | WP_001186738.1 | RadC family protein | - |
| H4J01_RS15070 () | 2984845..2985330 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| H4J01_RS15075 () | 2985421..2986239 | - | 819 | WP_001234664.1 | DUF945 domain-containing protein | - |
| H4J01_RS15080 () | 2986579..2987649 | - | 1071 | WP_000102671.1 | patatin-like phospholipase family protein | - |
| H4J01_RS15085 () | 2987646..2988551 | - | 906 | WP_000203541.1 | chemotaxis protein | - |
| H4J01_RS15090 () | 2988548..2990932 | - | 2385 | WP_000544657.1 | dynamin family protein | - |
| H4J01_RS15095 () | 2990950..2992402 | - | 1453 | Protein_2962 | AIDA repeat-containing protein | - |
| H4J01_RS15100 () | 2992571..2993442 | - | 872 | Protein_2963 | GTPase family protein | - |
| H4J01_RS15105 () | 2993685..2993942 | + | 258 | Protein_2964 | IS3 family transposase IS911 | Transposase |
| H4J01_RS15110 () | 2993955..2994098 | - | 144 | Protein_2965 | IS3 family transposase IS911 | Transposase |
| H4J01_RS15115 () | 2994155..2995368 | + | 1214 | WP_170315999.1 | IS3 family transposase IS629 | Transposase |
| H4J01_RS15120 () | 2995412..2996418 | - | 1007 | Protein_2967 | IS30 family transposase IS30D | Transposase |
| H4J01_RS15125 () | 2996548..2998161 | - | 1614 | WP_000080159.1 | IS66 family transposase ISEc47 | Transposase |
| H4J01_RS15130 () | 2998354..2999516 | + | 1163 | WP_085947603.1 | IS3 family transposase ISEc17 | Transposase |
| H4J01_RS15135 () | 3000531..3000806 | - | 276 | WP_000762451.1 | hypothetical protein | - |
| H4J01_RS15140 () | 3000987..3001355 | - | 369 | WP_000013660.1 | hypothetical protein | - |
| H4J01_RS15145 () | 3002507..3002746 | + | 240 | WP_000343040.1 | hypothetical protein | - |
| H4J01_RS15150 () | 3002786..3005224 | + | 2439 | WP_000985463.1 | type I restriction-modification system subunit M | - |
| H4J01_RS15155 () | 3005236..3006585 | + | 1350 | WP_001386438.1 | restriction endonuclease subunit S | - |
| H4J01_RS15160 () | 3006597..3007253 | + | 657 | WP_000312835.1 | DUF4433 domain-containing protein | Toxin Detail |
| H4J01_RS15165 () | 3007250..3008317 | + | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| H4J01_RS15170 () | 3008336..3011431 | + | 3096 | WP_000108733.1 | HsdR family type I site-specific deoxyribonuclease | - |
| H4J01_RS15175 () | 3011431..3012147 | + | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| H4J01_RS15180 () | 3012317..3012517 | + | 201 | Protein_2979 | transposase | - |
| H4J01_RS15185 () | 3012975..3013754 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| H4J01_RS15190 () | 3013754..3014776 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| H4J01_RS15195 () | 3014994..3016005 | + | 1012 | Protein_2982 | transposase | - |
| H4J01_RS15200 () | 3016076..3016267 | + | 192 | Protein_2983 | IS66 family transposase ISEc23 | Transposase |
| H4J01_RS15210 () | 3017578..3018117 | - | 540 | Protein_2985 | IS110 family transposase ISEc45 | Transposase |
| H4J01_RS15215 () | 3018178..3018366 | + | 189 | Protein_2986 | IS66 family transposase IS682 | Transposase |
| H4J01_RS15220 () | 3018483..3018688 | - | 206 | Protein_2987 | methyltransferase | - |
| H4J01_RS15225 () | 3018809..3019686 | + | 878 | Protein_2988 | IS4 family transposase | - |
| H4J01_RS15230 () | 3019960..3020181 | - | 222 | WP_000022709.1 | hypothetical protein | - |
| H4J01_RS15235 () | 3020485..3022062 | + | 1578 | Protein_2990 | ShET2/EspL2 family type III secretion system effector toxin | - |
| H4J01_RS15240 () | 3022279..3022428 | + | 150 | Protein_2991 | IS1 family transposase | - |
| H4J01_RS15245 () | 3022669..3023657 | + | 989 | Protein_2992 | hypothetical protein | VF |
| H4J01_RS15250 () | 3023706..3024212 | + | 507 | WP_000609738.1 | hypothetical protein | VF |
| H4J01_RS15255 () | 3024419..3028721 | + | 4303 | Protein_2994 | glycosyl transferase | - |
| H4J01_RS15260 () | 3028658..3033382 | + | 4725 | WP_001410075.1 | DUF3491 domain-containing protein | - |
| H4J01_RS15265 () | 3033632..3033871 | - | 240 | WP_001260398.1 | hypothetical protein | - |
| H4J01_RS15270 () | 3034024..3034516 | + | 493 | Protein_2997 | IS3 family transposase ISSfl10 | Transposase |
| H4J01_RS15275 () | 3034570..3034899 | - | 330 | Protein_2998 | DEAD/DEAH box helicase | - |
| H4J01_RS15280 () | 3035039..3035602 | - | 564 | WP_000282108.1 | inovirus-type Gp2 protein | - |
| H4J01_RS15285 () | 3036977..3038812 | - | 1836 | WP_001258871.1 | hypothetical protein | - |
| H4J01_RS15290 () | 3038913..3039200 | + | 288 | WP_000070929.1 | AlpA family transcriptional regulator | - |
| H4J01_RS15295 () | 3039172..3040701 | + | 1530 | WP_012578871.1 | DUF3987 domain-containing protein | - |
| H4J01_RS15300 () | 3040871..3042088 | - | 1218 | WP_000279877.1 | hypothetical protein ; Integrase | Integrase |
| H4J01_RS15305 () | 3042354..3043040 | - | 687 | WP_000009232.1 | DUF2726 domain-containing protein | - |
| H4J01_RS15310 () | 3043603..3044391 | - | 789 | WP_000533536.1 | phosphate starvation-inducible protein PhoH | - |
| H4J01_RS15315 () | 3045018..3046289 | - | 1272 | WP_001199145.1 | deferrochelatase/peroxidase EfeB | - |
| H4J01_RS15320 () | 3046295..3047422 | - | 1128 | WP_000154378.1 | iron uptake system protein EfeO | - |
| H4J01_RS15325 () | 3047480..3048310 | - | 831 | WP_000497957.1 | FTR1 family protein | - |
| H4J01_RS15330 () | 3048530..3050038 | - | 1509 | WP_001018494.1 | sodium/proline symporter PutP | - |
| H4J01_RS15335 () | 3050197..3050406 | - | 210 | WP_000979523.1 | hypothetical protein | - |
| H4J01_RS15340 () | 3050461..3054423 | + | 3963 | WP_012578870.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| H4J01_RS15345 () | 3054463..3055101 | - | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
| H4J01_RS15350 () | 3055389..3056480 | + | 1092 | WP_001340066.1 | pyrimidine utilization protein A | - |
| H4J01_RS15355 () | 3056480..3057172 | + | 693 | WP_001340067.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| H4J01_RS15360 () | 3057184..3057570 | + | 387 | WP_001126780.1 | pyrimidine utilization protein C | - |
| H4J01_RS15365 () | 3057578..3058378 | + | 801 | WP_001340068.1 | pyrimidine utilization protein D | - |
| H4J01_RS15370 () | 3058388..3058978 | + | 591 | WP_001001173.1 | malonic semialdehyde reductase | - |
| H4J01_RS15375 () | 3058989..3059483 | + | 495 | WP_001028090.1 | pyrimidine utilization flavin reductase protein F | - |
| H4J01_RS15380 () | 3059504..3060832 | + | 1329 | WP_001298362.1 | pyrimidine utilization transport protein G | - |
| H4J01_RS15385 () | 3060915..3061088 | - | 174 | WP_001273658.1 | general stress protein | - |
| H4J01_RS15390 () | 3061461..3062057 | + | 597 | WP_001151437.1 | NAD(P)H:quinone oxidoreductase | - |
| H4J01_RS15395 () | 3062078..3062305 | + | 228 | WP_001143120.1 | YccJ family protein | - |
| H4J01_RS15400 () | 3062340..3063713 | - | 1374 | WP_000244358.1 | IS4-like element ISEc13 family transposase | - |
| H4J01_RS15405 () | 3063902..3065143 | - | 1242 | WP_001044299.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O127:H6 str. E2348/69 | Prophage | TA23247 | NC_011601 | 1117747..1177570 | 0.006 |