MGE detailed information
MGE type: Genomic_island MGE length: 46792 bp
Accession: NZ_CP059130 Location: 320479..367270 Organism: Escherichia coli strain Ec55 Replicon: chromosome
Accession: NZ_CP059130 Location: 320479..367270 Organism: Escherichia coli strain Ec55 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0X92_RS01425 (317327) | 317327..318046 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| H0X92_RS01430 (318043) | 318043..319674 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| H0X92_RS01435 (319855) | 319855..320085 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| H0X92_RS01440 (320097) | 320097..320369 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| H0X92_RS01445 (320479) | 320479..323016 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| H0X92_RS01450 (323049) | 323049..323741 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| H0X92_RS01455 (323806) | 323806..324330 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| H0X92_RS01460 (324731) | 324731..328543 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| H0X92_RS01465 (329441) | 329441..330271 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| H0X92_RS01470 (331426) | 331426..335355 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| H0X92_RS01475 (335569) | 335569..335841 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| H0X92_RS01480 (336069) | 336069..336365 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| H0X92_RS01485 (336393) | 336393..336566 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| H0X92_RS01490 (336685) | 336685..338202 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| H0X92_RS01495 (338439) | 338439..339896 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| H0X92_RS01500 (339955) | 339955..342102 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| H0X92_RS01505 (342182) | 342182..343516 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| H0X92_RS01510 (343882) | 343882..345420 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| H0X92_RS26465 (345680) | 345680..345839 | - | 160 | Protein_291 | integrase | - |
| H0X92_RS01515 (346224) | 346224..347759 | - | 1536 | WP_000492897.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| H0X92_RS01520 (347830) | 347830..347991 | - | 162 | Protein_293 | DUF4942 domain-containing protein | - |
| H0X92_RS01525 (348082) | 348082..349581 | + | 1500 | WP_029700729.1 | IS21 family transposase ISEc10 | Transposase |
| H0X92_RS01530 (349578) | 349578..350333 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| H0X92_RS01535 (350382) | 350382..351092 | - | 711 | WP_001621817.1 | DUF4942 domain-containing protein | - |
| H0X92_RS01540 (351177) | 351177..351374 | - | 198 | WP_000839254.1 | DUF957 domain-containing protein | - |
| H0X92_RS01545 (351386) | 351386..351874 | - | 489 | WP_000761714.1 | DUF5983 family protein | - |
| H0X92_RS01550 (351871) | 351871..352248 | - | 378 | WP_001094436.1 | TA system toxin CbtA family protein | Toxin Detail |
| H0X92_RS01555 (352295) | 352295..352672 | - | 378 | WP_015953067.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| H0X92_RS01560 (352751) | 352751..352972 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| H0X92_RS01565 (353041) | 353041..353517 | - | 477 | WP_001186756.1 | RadC family protein | - |
| H0X92_RS01570 (353532) | 353532..354017 | - | 486 | WP_000860054.1 | antirestriction protein | - |
| H0X92_RS01575 (354108) | 354108..354926 | - | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| H0X92_RS01580 (355016) | 355016..355249 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| H0X92_RS01585 (355255) | 355255..355932 | - | 678 | WP_001097312.1 | hypothetical protein | - |
| H0X92_RS01590 (356080) | 356080..356760 | - | 681 | WP_001282927.1 | WYL domain-containing protein | - |
| H0X92_RS01595 (356963) | 356963..357847 | - | 885 | WP_000010416.1 | 50S ribosome-binding GTPase | - |
| H0X92_RS01600 (357953) | 357953..358903 | + | 951 | WP_000157734.1 | hypothetical protein | - |
| H0X92_RS01605 (358900) | 358900..359688 | - | 789 | WP_000816188.1 | hypothetical protein | - |
| H0X92_RS01610 (361044) | 361044..361217 | - | 174 | WP_023150487.1 | hypothetical protein | - |
| H0X92_RS01615 (361397) | 361397..362128 | + | 732 | WP_029700721.1 | inovirus Gp2 family protein | - |
| H0X92_RS01620 (362456) | 362456..363334 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| H0X92_RS01625 (363390) | 363390..364024 | - | 635 | Protein_314 | IS3 family transposase IS2 | Transposase |
| H0X92_RS01630 (364322) | 364322..364438 | + | 117 | Protein_315 | phosphoporin PhoE | - |
| H0X92_RS01635 (364440) | 364440..364573 | + | 134 | Protein_316 | phosphate-starvation-inducible protein PsiE | - |
| H0X92_RS01640 (364648) | 364648..366099 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| H0X92_RS01645 (366092) | 366092..367270 | - | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| H0X92_RS01650 (367744) | 367744..368957 | + | 1214 | WP_162880626.1 | IS3 family transposase | - |
| H0X92_RS01655 (369181) | 369181..369510 | - | 330 | WP_000481835.1 | multidrug efflux SMR transporter | - |
| H0X92_RS01660 (369526) | 369526..369927 | - | 402 | WP_000095890.1 | multidrug efflux SMR transporter | - |
| H0X92_RS01665 (369960) | 369960..370625 | - | 666 | WP_000139438.1 | hypothetical protein | - |
| H0X92_RS01670 (370637) | 370637..371257 | - | 621 | WP_000564322.1 | phosphate propanoyltransferase | - |
| H0X92_RS01675 (371254) | 371254..371718 | - | 465 | WP_001086629.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|