MGE detailed information
MGE type: Prophage MGE length: 40126 bp
Accession: NZ_CP058833 Location: 4044279..4084404 Organism: Shigella flexneri strain STLEFF_27 Replicon: chromosome
Accession: NZ_CP058833 Location: 4044279..4084404 Organism: Shigella flexneri strain STLEFF_27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT22_RS19610 (4039317) | 4039317..4039517 | - | 201 | WP_000417058.1 | YaeP family protein | - |
| HZT22_RS19615 (4039683) | 4039683..4040228 | + | 546 | WP_001185290.1 | YaeQ family protein | - |
| HZT22_RS19620 (4040225) | 4040225..4040647 | + | 423 | WP_000635537.1 | alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB | - |
| HZT22_RS19625 (4040661) | 4040661..4041371 | + | 711 | WP_000239163.1 | envelope stress response activation lipoprotein NlpE | - |
| HZT22_RS19630 (4041571) | 4041571..4042395 | - | 825 | WP_001336393.1 | YaeF family permuted papain-like enzyme | - |
| HZT22_RS19635 (4042449) | 4042449..4044167 | - | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
| HZT22_RS19640 (4044279) | 4044279..4044986 | - | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| HZT22_RS19645 (4044983) | 4044983..4045387 | - | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| HZT22_RS19650 (4045505) | 4045505..4046320 | - | 816 | WP_000874226.1 | hypothetical protein | VF |
| HZT22_RS19655 (4046360) | 4046360..4047013 | - | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| HZT22_RS19660 (4047006) | 4047006..4048037 | - | 1032 | WP_000594006.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HZT22_RS19665 (4048225) | 4048225..4048800 | + | 576 | WP_001140187.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| HZT22_RS19700 (4054560) | 4054560..4055363 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| HZT22_RS19705 (4055360) | 4055360..4056274 | - | 915 | WP_000648572.1 | HTH-type transcriptional regulator ArgP | VF |
| HZT22_RS19710 (4056515) | 4056515..4057315 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| HZT22_RS19715 (4057346) | 4057346..4057942 | + | 597 | Protein_3857 | methyltransferase domain-containing protein | - |
| HZT22_RS19720 (4057990) | 4057990..4059348 | - | 1359 | WP_000644685.1 | hypothetical protein | VF |
| HZT22_RS19725 (4059420) | 4059420..4060175 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| HZT22_RS19730 (4060209) | 4060209..4060931 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| HZT22_RS19735 (4060928) | 4060928..4061395 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| HZT22_RS19740 (4061460) | 4061460..4062191 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| HZT22_RS19750 (4062728) | 4062728..4062883 | + | 156 | Protein_3863 | hypothetical protein | - |
| HZT22_RS19760 (4063650) | 4063650..4064519 | - | 870 | Protein_3865 | hypothetical protein | VF |
| HZT22_RS19765 (4064570) | 4064570..4064794 | - | 225 | WP_000123970.1 | hypothetical protein | - |
| HZT22_RS19770 (4064829) | 4064829..4065329 | - | 501 | WP_000037397.1 | hypothetical protein | VF |
| HZT22_RS19775 (4066024) | 4066024..4066542 | + | 519 | WP_001142958.1 | hypothetical protein | VF |
| HZT22_RS24525 (4066752) | 4066752..4068767 | + | 2016 | Protein_3869 | hypothetical protein | VF |
| HZT22_RS24530 (4069086) | 4069086..4069892 | + | 807 | WP_244573022.1 | hypothetical protein | VF |
| HZT22_RS19785 (4069870) | 4069870..4070262 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| HZT22_RS19790 (4070693) | 4070693..4071829 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| HZT22_RS19795 (4071870) | 4071870..4072640 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HZT22_RS19800 (4072821) | 4072821..4073267 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HZT22_RS19805 (4073310) | 4073310..4075754 | - | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| HZT22_RS19810 (4075994) | 4075994..4076572 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HZT22_RS19815 (4076778) | 4076778..4077545 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| HZT22_RS19820 (4077516) | 4077516..4078256 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| HZT22_RS19825 (4078412) | 4078412..4078690 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HZT22_RS19830 (4078693) | 4078693..4078953 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HZT22_RS19835 (4079163) | 4079163..4079912 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| HZT22_RS19840 (4080088) | 4080088..4080585 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HZT22_RS19845 (4080809) | 4080809..4082521 | - | 1713 | Protein_3883 | hypothetical protein | VF |
| HZT22_RS19850 (4082493) | 4082493..4083278 | + | 786 | WP_000207552.1 | hypothetical protein | VF |
| HZT22_RS19855 (4083349) | 4083349..4084404 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HZT22_RS19860 (4084456) | 4084456..4084749 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | - |
| HZT22_RS19865 (4084752) | 4084752..4085150 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| HZT22_RS19870 (4085160) | 4085160..4085612 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| HZT22_RS19875 (4085930) | 4085930..4086136 | + | 207 | Protein_3889 | RtcB family protein | - |
| HZT22_RS19880 (4086132) | 4086132..4086653 | + | 522 | Protein_3890 | peptide chain release factor H | - |
| HZT22_RS19885 (4086710) | 4086710..4088167 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| HZT22_RS19890 (4088428) | 4088428..4088886 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|