MGE detailed information
MGE type: Genomic_island MGE length: 9947 bp
Accession: NZ_CP058833 Location: 2390377..2400323 Organism: Shigella flexneri strain STLEFF_27 Replicon: chromosome
Accession: NZ_CP058833 Location: 2390377..2400323 Organism: Shigella flexneri strain STLEFF_27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT22_RS11670 (2386210) | 2386210..2387541 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HZT22_RS11675 (2387563) | 2387563..2388552 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HZT22_RS11680 (2388651) | 2388651..2389589 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HZT22_RS11685 (2389903) | 2389903..2390121 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HZT22_RS11690 (2390377) | 2390377..2390915 | + | 539 | Protein_2299 | protein YhaB | - |
| HZT22_RS11695 (2390937) | 2390937..2392124 | + | 1188 | WP_049253626.1 | YhaC family protein | - |
| HZT22_RS11705 (2393147) | 2393147..2394292 | - | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| HZT22_RS11710 (2394389) | 2394389..2395279 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HZT22_RS11715 (2395309) | 2395309..2396079 | - | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HZT22_RS11720 (2396095) | 2396095..2397429 | - | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HZT22_RS11725 (2397804) | 2397804..2399375 | + | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| HZT22_RS11730 (2399524) | 2399524..2399859 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HZT22_RS11735 (2399859) | 2399859..2400323 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HZT22_RS11740 (2400378) | 2400378..2401187 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HZT22_RS11745 (2401436) | 2401436..2402716 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HZT22_RS11750 (2402739) | 2402739..2403212 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HZT22_RS11755 (2403223) | 2403223..2404002 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HZT22_RS11760 (2403992) | 2403992..2404870 | + | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HZT22_RS11765 (2404888) | 2404888..2405322 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|