MGE detailed information
MGE type: Genomic_island MGE length: 16059 bp
Accession: NZ_CP058828 Location: 3713970..3730028 Organism: Shigella flexneri strain STLE3 Replicon: chromosome
Accession: NZ_CP058828 Location: 3713970..3730028 Organism: Shigella flexneri strain STLE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT20_RS17830 (3709473) | 3709473..3709874 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3710592) | 3710592..3710672 | - | 81 | NuclAT_11 | - | - |
| - (3710592) | 3710592..3710672 | - | 81 | NuclAT_11 | - | - |
| - (3710592) | 3710592..3710672 | - | 81 | NuclAT_11 | - | - |
| - (3710592) | 3710592..3710672 | - | 81 | NuclAT_11 | - | - |
| HZT20_RS17835 (3709932) | 3709932..3711176 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| HZT20_RS17840 (3711268) | 3711268..3711726 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HZT20_RS17845 (3711987) | 3711987..3713444 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| HZT20_RS17850 (3713501) | 3713501..3714022 | - | 522 | Protein_3507 | peptide chain release factor H | - |
| HZT20_RS17855 (3714021) | 3714021..3714224 | - | 204 | Protein_3508 | RtcB family protein | - |
| HZT20_RS17860 (3714470) | 3714470..3714922 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| HZT20_RS17865 (3714932) | 3714932..3715330 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HZT20_RS17870 (3715333) | 3715333..3715626 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HZT20_RS17875 (3715678) | 3715678..3716733 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HZT20_RS17880 (3716804) | 3716804..3717589 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| HZT20_RS17885 (3717561) | 3717561..3719099 | + | 1539 | Protein_3514 | hypothetical protein | VF |
| HZT20_RS17890 (3719323) | 3719323..3719820 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HZT20_RS17895 (3719996) | 3719996..3720769 | - | 774 | WP_001355630.1 | hypothetical protein | VF |
| HZT20_RS17900 (3720955) | 3720955..3721215 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| HZT20_RS17905 (3721218) | 3721218..3721487 | + | 270 | Protein_3518 | type II toxin-antitoxin system YafQ family toxin | - |
| HZT20_RS17910 (3721643) | 3721643..3722383 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| HZT20_RS17915 (3722354) | 3722354..3723121 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| HZT20_RS17920 (3723327) | 3723327..3723905 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HZT20_RS17925 (3724145) | 3724145..3726589 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| HZT20_RS17930 (3726632) | 3726632..3727078 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HZT20_RS17935 (3727259) | 3727259..3728029 | + | 771 | WP_045148759.1 | 2-oxoglutaramate amidase | - |
| HZT20_RS17940 (3728070) | 3728070..3729206 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| HZT20_RS17945 (3729637) | 3729637..3729813 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| HZT20_RS17950 (3729810) | 3729810..3730028 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| HZT20_RS17955 (3730006) | 3730006..3734238 | - | 4233 | WP_106422998.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|