MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96423 bp
Accession: NZ_CP058666 Location: 1923445..2019867 Organism: Streptococcus agalactiae strain S9968 Replicon: chromosome
Accession: NZ_CP058666 Location: 1923445..2019867 Organism: Streptococcus agalactiae strain S9968 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S9968_RS09920 () | 1918551..1919789 | - | 1239 | WP_000573350.1 | GTPase HflX | - |
| S9968_RS09925 () | 1919880..1920770 | - | 891 | WP_001226482.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| S9968_RS09930 () | 1920881..1921057 | + | 177 | WP_000239229.1 | DUF3042 family protein | - |
| S9968_RS09935 () | 1921099..1922016 | - | 918 | Protein_1884 | TDT family transporter | - |
| S9968_RS09940 () | 1922151..1925909 | - | 3759 | WP_050265453.1 | pullulanase | - |
| S9968_RS09945 () | 1926078..1926811 | - | 734 | Protein_1886 | hypothetical protein | - |
| S9968_RS09950 () | 1926826..1927410 | - | 585 | WP_000130593.1 | uracil-DNA glycosylase family protein | - |
| S9968_RS09955 () | 1927507..1928913 | - | 1407 | WP_000150956.1 | dipeptidase PepV | - |
| S9968_RS09960 () | 1928960..1929562 | - | 603 | WP_000670191.1 | nitroreductase family protein | - |
| S9968_RS09965 () | 1929732..1931513 | + | 1782 | Protein_1890 | glycerophosphodiester phosphodiesterase | - |
| S9968_RS09970 () | 1931555..1933336 | - | 1782 | WP_001003961.1 | excinuclease ABC subunit UvrC | - |
| S9968_RS09975 () | 1933495..1934262 | + | 768 | WP_000567584.1 | epoxyqueuosine reductase QueH | - |
| S9968_RS09980 () | 1934321..1935661 | - | 1341 | WP_000285038.1 | MATE family efflux transporter | - |
| S9968_RS09985 () | 1935761..1936177 | - | 417 | WP_000245056.1 | VOC family protein | - |
| S9968_RS09990 () | 1936181..1936678 | - | 498 | WP_000582587.1 | hypothetical protein | - |
| S9968_RS09995 () | 1936900..1937496 | + | 597 | WP_000162276.1 | Ltp family lipoprotein | - |
| S9968_RS10000 () | 1937685..1938790 | + | 1106 | WP_088196775.1 | IS3 family transposase ISSag4 | Transposase |
| S9968_RS10005 () | 1939014..1940142 | + | 1129 | Protein_1898 | IS3 family transposase ISStin5 | Transposase |
| S9968_RS10010 () | 1940182..1940421 | + | 240 | Protein_1899 | IS3 family transposase ISSag5 | Transposase |
| S9968_RS10015 () | 1940619..1943090 | - | 2472 | WP_000754576.1 | pneumococcal-type histidine triad protein | - |
| S9968_RS10020 () | 1943103..1944023 | - | 921 | WP_000715197.1 | High-affinity zinc uptake system binding-protein ZnuA | VF |
| S9968_RS10025 () | 1944212..1945344 | - | 1133 | Protein_1902 | ISAs1 family transposase IS1548 | Transposase |
| S9968_RS10030 () | 1945595..1949047 | - | 3453 | WP_001227846.1 | C5a peptidase | VF |
| S9968_RS10035 () | 1949585..1950742 | - | 1158 | WP_161512646.1 | ISLre2 family transposase ISTeha1 | Transposase |
| S9968_RS10040 () | 1950849..1951870 | + | 1022 | Protein_1905 | IS3 family transposase ISSag4 | Transposase |
| S9968_RS10045 () | 1952062..1953876 | - | 1815 | WP_000007465.1 | 3'-5' exoribonuclease | - |
| S9968_RS10050 () | 1954293..1955513 | + | 1221 | WP_000248017.1 | hypothetical protein | - |
| S9968_RS10055 () | 1955708..1956907 | - | 1200 | WP_000201989.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| S9968_RS10060 () | 1956930..1957157 | - | 228 | WP_001258319.1 | DUF3173 domain-containing protein | - |
| S9968_RS10065 () | 1957436..1957660 | - | 225 | WP_000286254.1 | helix-turn-helix domain-containing protein | - |
| S9968_RS10070 () | 1957841..1959706 | - | 1866 | WP_000237150.1 | relaxase/mobilization nuclease domain-containing protein | - |
| S9968_RS10075 () | 1959693..1960058 | - | 366 | WP_000431642.1 | MobC family plasmid mobilization relaxosome protein | - |
| S9968_RS10080 () | 1960065..1960427 | - | 363 | WP_000527641.1 | hypothetical protein | - |
| S9968_RS10085 () | 1961146..1961583 | + | 438 | Protein_1914 | IS3 family transposase | - |
| S9968_RS10090 () | 1961858..1963987 | - | 2130 | WP_000086364.1 | cadmium-translocating P-type ATPase | - |
| S9968_RS10095 () | 1963980..1964348 | - | 369 | WP_000592531.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| S9968_RS10100 () | 1964551..1964850 | + | 300 | WP_001072464.1 | hypothetical protein | - |
| S9968_RS10105 () | 1964904..1965692 | - | 789 | WP_000540327.1 | hypothetical protein | - |
| S9968_RS10110 () | 1965701..1966297 | + | 597 | WP_000934381.1 | TIGR01906 family membrane protein | - |
| S9968_RS10115 () | 1966471..1968558 | - | 2088 | WP_001245437.1 | Copper-exporting P-type ATPase B | VF |
| S9968_RS10120 () | 1968697..1968903 | - | 207 | WP_000711500.1 | copper chaperone TcrZ | - |
| S9968_RS10125 () | 1968983..1969521 | - | 539 | Protein_1922 | Copper-transporting P-type ATPase | VF |
| S9968_RS10130 () | 1969514..1969960 | - | 447 | WP_000103845.1 | Transcriptional repressor CopY ; Integrase | Integrase |
| S9968_RS10135 () | 1970418..1970756 | - | 339 | WP_000711078.1 | Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX | - |
| S9968_RS10140 () | 1970769..1971383 | - | 615 | WP_000615743.1 | CadD family cadmium resistance transporter | - |
| S9968_RS10145 () | 1971457..1973019 | - | 1563 | WP_000756015.1 | Transposon Tn3 resolvase ; Integrase | Integrase |
| S9968_RS10150 () | 1973019..1973852 | - | 834 | WP_172396922.1 | hypothetical protein ; Integrase | Integrase |
| S9968_RS10155 () | 1974046..1974207 | - | 162 | WP_000382663.1 | hypothetical protein | - |
| S9968_RS10160 () | 1974316..1975785 | - | 1470 | WP_000515884.1 | LysM peptidoglycan-binding domain-containing protein | - |
| S9968_RS10165 () | 1975792..1976187 | - | 396 | WP_000661395.1 | phage holin family protein | - |
| S9968_RS10170 () | 1976165..1976371 | - | 207 | WP_000922387.1 | hypothetical protein | - |
| S9968_RS10175 () | 1977008..1977367 | + | 360 | WP_001058366.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| S9968_RS10180 () | 1977364..1979481 | + | 2118 | WP_001291323.1 | cadmium-translocating P-type ATPase | - |
| S9968_RS10185 () | 1980066..1980176 | - | 111 | Protein_1934 | helix-turn-helix domain-containing protein | - |
| S9968_RS10190 () | 1980184..1980414 | + | 231 | WP_001875682.1 | CHAP domain-containing protein | - |
| S9968_RS10195 () | 1980527..1981297 | - | 771 | WP_000490874.1 | ABC transporter permease | - |
| S9968_RS10200 () | 1981290..1982225 | - | 936 | WP_000119359.1 | putative ABC transporter ATP-binding protein YadG | VF |
| S9968_RS10205 () | 1982303..1982490 | - | 188 | Protein_1938 | hypothetical protein | - |
| S9968_RS10210 () | 1982515..1984188 | - | 1674 | WP_000706535.1 | FAD-dependent oxidoreductase | - |
| S9968_RS10215 () | 1984209..1984439 | - | 231 | Protein_1940 | arsenic resistance protein | - |
| S9968_RS10220 () | 1984476..1986218 | - | 1743 | WP_000781150.1 | Arsenical pump-driving ATPase | VF |
| S9968_RS10225 () | 1986254..1986601 | - | 348 | WP_000384355.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| S9968_RS10230 () | 1986735..1987106 | - | 372 | WP_000049327.1 | arsenite efflux transporter metallochaperone ArsD | - |
| S9968_RS10235 () | 1987108..1987401 | - | 294 | WP_000385048.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| S9968_RS10240 () | 1987583..1988260 | - | 678 | WP_001067797.1 | IS6 family transposase IS1216E | Transposase |
| S9968_RS10245 () | 1988549..1988797 | - | 249 | WP_179862441.1 | hypothetical protein | - |
| S9968_RS10250 () | 1988894..1989283 | - | 390 | WP_000048070.1 | hypothetical protein | - |
| S9968_RS10255 () | 1989280..1989507 | - | 228 | WP_001272968.1 | hypothetical protein | - |
| S9968_RS10260 () | 1989561..1990637 | - | 1077 | WP_000196869.1 | toprim domain-containing protein | - |
| S9968_RS10265 () | 1990677..1991315 | - | 639 | WP_000933071.1 | hypothetical protein | - |
| S9968_RS10270 () | 1991411..1991701 | - | 291 | WP_000893087.1 | hypothetical protein | - |
| S9968_RS10275 () | 1991715..1992014 | - | 300 | WP_000079455.1 | hypothetical protein | - |
| S9968_RS10280 () | 1992085..1998909 | - | 6825 | WP_001071177.1 | N-6 DNA methylase | - |
| S9968_RS10285 () | 1998958..1999509 | - | 552 | WP_000220099.1 | hypothetical protein | - |
| S9968_RS10290 () | 1999493..1999684 | - | 192 | WP_001068445.1 | calcium-binding protein | - |
| S9968_RS10295 () | 1999685..2004580 | - | 4896 | WP_050881995.1 | Agglutinin receptor | VF |
| S9968_RS10300 () | 2004859..2005449 | + | 591 | WP_000037239.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| S9968_RS10305 () | 2005446..2006291 | + | 846 | WP_001030302.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| S9968_RS10310 () | 2006377..2009178 | - | 2802 | WP_000656698.1 | CHAP domain-containing protein | - |
| S9968_RS10315 () | 2009180..2011531 | - | 2352 | WP_000734153.1 | hypothetical protein | - |
| S9968_RS10320 () | 2011488..2011841 | - | 354 | WP_001097576.1 | PrgI family protein | - |
| S9968_RS10325 () | 2011903..2012757 | - | 855 | WP_000980124.1 | conjugal transfer protein TrbL | - |
| S9968_RS10330 () | 2012776..2013018 | - | 243 | WP_001072182.1 | hypothetical protein | - |
| S9968_RS10335 () | 2013036..2014853 | - | 1818 | WP_000287313.1 | type IV secretory system conjugative DNA transfer family protein | - |
| S9968_RS10340 () | 2014853..2015341 | - | 489 | WP_000093699.1 | hypothetical protein | - |
| S9968_RS10345 () | 2015418..2016002 | - | 585 | WP_000619432.1 | CPBP family intramembrane metalloprotease | - |
| S9968_RS10350 () | 2016005..2016238 | - | 234 | WP_001005707.1 | hypothetical protein | - |
| S9968_RS10355 () | 2016247..2016630 | - | 384 | WP_000895333.1 | hypothetical protein | - |
| S9968_RS10360 () | 2016641..2017069 | - | 429 | WP_001050386.1 | hypothetical protein | - |
| S9968_RS10365 () | 2017053..2018408 | - | 1356 | WP_050265405.1 | DNA (cytosine-5-)-methyltransferase | - |
| S9968_RS10370 () | 2018557..2019375 | - | 819 | WP_000822785.1 | replication initiator protein A | - |
| S9968_RS10375 () | 2019372..2019545 | - | 174 | WP_001168336.1 | hypothetical protein | - |
| S9968_RS10380 () | 2019744..2020109 | - | 366 | WP_001196973.1 | 50S ribosomal protein L7/L12 | - |
| S9968_RS10385 () | 2020173..2020673 | - | 501 | WP_001287288.1 | 50S ribosomal protein L10 | - |
| S9968_RS10390 () | 2021106..2023214 | + | 2109 | WP_000002814.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| S9968_RS10395 () | 2023307..2024251 | - | 945 | Protein_1976 | homocysteine S-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|