MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67321 bp
Accession: NZ_CP058620 Location: 1..67321 Organism: Escherichia coli strain JS316 Replicon: plasmid unnamed2
Accession: NZ_CP058620 Location: 1..67321 Organism: Escherichia coli strain JS316 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZF20_RS23205 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| HZF20_RS23210 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| HZF20_RS23215 () | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| HZF20_RS23220 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| HZF20_RS23225 () | 3449..4618 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| HZF20_RS23230 () | 4651..4779 | + | 129 | Protein_5 | IS481 family transposase | - |
| HZF20_RS23235 () | 4814..5008 | - | 195 | WP_086258557.1 | hypothetical protein | - |
| HZF20_RS23240 () | 5050..5747 | + | 698 | Protein_7 | IS1 family transposase | - |
| HZF20_RS23245 () | 5916..6509 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| HZF20_RS23250 () | 6622..7827 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| HZF20_RS23255 () | 7909..8532 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| HZF20_RS23260 () | 8510..8629 | - | 120 | Protein_11 | ArsR family transcriptional regulator | - |
| HZF20_RS23265 () | 8645..9342 | - | 698 | Protein_12 | IS1 family transposase | - |
| HZF20_RS23270 () | 9396..9689 | - | 294 | Protein_13 | hypothetical protein | - |
| HZF20_RS23275 () | 9753..10457 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZF20_RS23280 () | 10518..11354 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HZF20_RS23285 () | 11354..12157 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HZF20_RS23290 () | 12218..13033 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| HZF20_RS23295 () | 13341..14192 | - | 852 | WP_000240536.1 | replication protein | - |
| HZF20_RS23300 () | 14179..14898 | - | 720 | Protein_19 | AAA family ATPase | - |
| HZF20_RS23305 () | 14948..15652 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZF20_RS23310 () | 15689..16816 | - | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| HZF20_RS23315 () | 16867..17094 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| HZF20_RS23320 () | 17118..17309 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| HZF20_RS23325 () | 17791..18333 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| HZF20_RS23330 () | 18346..19206 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| HZF20_RS23335 () | 19349..20254 | + | 906 | Protein_26 | IS4 family transposase IS10R | Transposase |
| HZF20_RS23340 () | 20303..21007 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZF20_RS23345 () | 21249..22109 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HZF20_RS23350 () | 22259..22357 | - | 99 | Protein_29 | IS1 family transposase | - |
| HZF20_RS23355 () | 22386..23696 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| HZF20_RS23360 () | 23981..24382 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HZF20_RS23365 () | 24315..24572 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HZF20_RS23370 () | 24665..25318 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HZF20_RS23375 () | 26257..27114 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| HZF20_RS23380 () | 27107..27181 | - | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
| HZF20_RS23385 () | 27178..27312 | - | 135 | Protein_36 | protein CopA/IncA | - |
| HZF20_RS23390 () | 27642..28139 | - | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| HZF20_RS23395 () | 28289..30190 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| HZF20_RS23400 () | 31485..31697 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| HZF20_RS23405 () | 31723..32286 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| HZF20_RS23410 () | 32334..33695 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| HZF20_RS23415 () | 33747..33977 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HZF20_RS23420 () | 35012..35203 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HZF20_RS23425 () | 35200..35622 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| HZF20_RS23430 () | 35669..35971 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| HZF20_RS23435 () | 36511..37287 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| HZF20_RS23440 () | 37338..37772 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| HZF20_RS23445 () | 37786..38007 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| HZF20_RS23450 () | 38008..38691 | - | 684 | WP_000086185.1 | DNA methylase | - |
| HZF20_RS23455 () | 38768..39072 | - | 305 | Protein_50 | hypothetical protein | - |
| HZF20_RS23460 () | 39076..39978 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HZF20_RS23465 () | 40845..41816 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HZF20_RS23470 () | 41816..42982 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HZF20_RS23475 () | 43570..44325 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HZF20_RS23480 () | 45099..45905 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HZF20_RS23485 () | 45906..46211 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HZF20_RS23490 () | 46213..46431 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HZF20_RS23495 () | 47065..47262 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| HZF20_RS23500 () | 47259..47543 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| HZF20_RS23505 () | 47563..48696 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| HZF20_RS23510 () | 48959..52078 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| HZF20_RS23515 () | 52385..52615 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HZF20_RS23520 () | 52612..53028 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZF20_RS23525 () | 53190..55328 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| HZF20_RS23530 () | 55793..56788 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| HZF20_RS23535 () | 56792..57724 | + | 933 | Protein_66 | hypothetical protein | - |
| HZF20_RS23540 () | 57861..58558 | - | 698 | Protein_67 | IS1 family transposase IS1G | Transposase |
| HZF20_RS23545 () | 58772..61888 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HZF20_RS23550 () | 62010..63281 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| HZF20_RS23555 () | 63278..64834 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| HZF20_RS23560 () | 65017..65238 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HZF20_RS23565 () | 65238..65618 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HZF20_RS23570 () | 65623..65802 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| HZF20_RS23575 () | 65830..66189 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| HZF20_RS23580 () | 66113..66526 | + | 414 | Protein_75 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|