MGE detailed information
MGE type: Prophage MGE length: 47520 bp
Accession: NZ_CP058355 Location: 3546076..3593595 Organism: Escherichia coli strain AMSCJX03 Replicon: chromosome
Accession: NZ_CP058355 Location: 3546076..3593595 Organism: Escherichia coli strain AMSCJX03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS77_RS16940 () | 3541758..3542621 | + | 864 | WP_032200809.1 | GTPase family protein | - |
| HXS77_RS16945 () | 3542713..3543534 | + | 822 | WP_032200808.1 | DUF945 domain-containing protein | - |
| HXS77_RS16950 () | 3543751..3544452 | + | 702 | WP_001581462.1 | WYL domain-containing protein | - |
| HXS77_RS16955 () | 3544493..3544729 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| HXS77_RS16960 () | 3544729..3545172 | + | 444 | WP_032199444.1 | hypothetical protein | - |
| HXS77_RS16965 () | 3545195..3545662 | + | 468 | WP_032200803.1 | hypothetical protein | - |
| HXS77_RS16970 () | 3545739..3545978 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| HXS77_RS16975 () | 3546076..3546534 | + | 459 | WP_032177818.1 | antirestriction protein | - |
| HXS77_RS16980 () | 3546550..3547026 | + | 477 | WP_072667534.1 | RadC family protein | - |
| HXS77_RS16985 () | 3547035..3547256 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| HXS77_RS16990 () | 3547275..3547592 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| HXS77_RS16995 () | 3547613..3547954 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| HXS77_RS17000 () | 3548613..3549221 | - | 609 | WP_178887729.1 | tail fiber assembly protein | - |
| HXS77_RS17005 () | 3549500..3551800 | - | 2301 | Protein_3327 | prophage tail fiber N-terminal domain-containing protein | - |
| HXS77_RS17010 () | 3551865..3552464 | - | 600 | WP_001230352.1 | Outer membrane protein X | VF |
| HXS77_RS17015 () | 3552531..3555929 | - | 3399 | WP_178887731.1 | host specificity protein J | - |
| HXS77_RS17020 () | 3555989..3556621 | - | 633 | WP_000090873.1 | tail assembly protein | - |
| HXS77_RS17025 () | 3556558..3557301 | - | 744 | WP_178887733.1 | C40 family peptidase | - |
| HXS77_RS17030 () | 3557307..3558005 | - | 699 | WP_178887735.1 | phage minor tail protein L | - |
| HXS77_RS17035 () | 3558005..3558334 | - | 330 | WP_000847379.1 | phage tail protein | - |
| HXS77_RS17040 () | 3558331..3560892 | - | 2562 | WP_178887737.1 | phage tail tape measure protein | - |
| HXS77_RS17045 () | 3560885..3561319 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| HXS77_RS17050 () | 3561301..3561723 | - | 423 | WP_178887739.1 | phage minor tail protein G | - |
| HXS77_RS17055 () | 3561739..3562479 | - | 741 | WP_024260476.1 | phage tail protein | - |
| HXS77_RS17060 () | 3562487..3562882 | - | 396 | WP_000683142.1 | phage minor tail U family protein | - |
| HXS77_RS17065 () | 3562882..3563457 | - | 576 | WP_178887741.1 | phage tail protein | - |
| HXS77_RS17070 () | 3563469..3563822 | - | 354 | WP_000753005.1 | head-tail joining protein | - |
| HXS77_RS17075 () | 3563834..3564229 | - | 396 | WP_178887743.1 | DNA-packaging protein FI | - |
| HXS77_RS17080 () | 3564271..3565296 | - | 1026 | WP_000063240.1 | major capsid protein | - |
| HXS77_RS17085 () | 3565352..3565684 | - | 333 | WP_001299443.1 | head decoration protein | - |
| HXS77_RS17090 () | 3565694..3567013 | - | 1320 | WP_000123271.1 | S49 family peptidase | - |
| HXS77_RS17095 () | 3566994..3568595 | - | 1602 | WP_178887745.1 | phage portal protein | - |
| HXS77_RS17100 () | 3568592..3568798 | - | 207 | WP_000198149.1 | gpW family protein | - |
| HXS77_RS17105 () | 3568795..3570720 | - | 1926 | WP_001027268.1 | phage terminase large subunit family protein | - |
| HXS77_RS17110 () | 3570695..3571240 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HXS77_RS17115 () | 3571629..3571862 | + | 234 | WP_001663509.1 | YlcI/YnfO family protein | - |
| HXS77_RS17120 () | 3571921..3572331 | + | 411 | WP_001537735.1 | DUF1398 domain-containing protein | - |
| HXS77_RS17125 () | 3572825..3573088 | - | 264 | WP_072731453.1 | hypothetical protein | - |
| HXS77_RS17130 () | 3573091..3573819 | - | 729 | WP_016063372.1 | KilA-N domain-containing protein | - |
| HXS77_RS17135 () | 3574029..3574490 | - | 462 | WP_178887747.1 | lysis protein | - |
| HXS77_RS17140 () | 3574474..3574950 | - | 477 | WP_178887749.1 | glycoside hydrolase family protein | - |
| HXS77_RS17145 () | 3574934..3575257 | - | 324 | WP_015980128.1 | phage holin, lambda family | - |
| HXS77_RS17160 () | 3575747..3576235 | - | 489 | WP_178887750.1 | antiterminator | - |
| HXS77_RS17165 () | 3576226..3576420 | - | 195 | WP_016063210.1 | NinH protein | - |
| HXS77_RS17170 () | 3576417..3576779 | - | 363 | WP_001549462.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HXS77_RS17175 () | 3576780..3577304 | - | 525 | WP_059240179.1 | HNH endonuclease | - |
| HXS77_RS17180 () | 3577301..3577591 | - | 291 | WP_178887752.1 | DUF1364 domain-containing protein | - |
| HXS77_RS17185 () | 3577591..3578313 | - | 723 | WP_001003984.1 | DNA-binding protein | - |
| HXS77_RS17190 () | 3578306..3578476 | - | 171 | WP_096099000.1 | ninF | - |
| HXS77_RS17195 () | 3578836..3579015 | - | 180 | WP_059331123.1 | protein ninF | - |
| HXS77_RS17200 () | 3579012..3579194 | - | 183 | WP_024194825.1 | NinE family protein | - |
| HXS77_RS17205 () | 3579191..3579631 | - | 441 | WP_000736913.1 | recombination protein NinB | - |
| HXS77_RS17210 () | 3579680..3580291 | - | 612 | WP_178887754.1 | HNH endonuclease | - |
| HXS77_RS17215 () | 3580373..3582838 | - | 2466 | WP_178887756.1 | helicase DnaB | - |
| HXS77_RS17220 () | 3582828..3583718 | - | 891 | WP_000539336.1 | hypothetical protein | - |
| HXS77_RS17225 () | 3583705..3583866 | - | 162 | WP_000166961.1 | hypothetical protein | - |
| HXS77_RS17230 () | 3583899..3584195 | - | 297 | WP_000035948.1 | hypothetical protein | - |
| HXS77_RS17235 () | 3584313..3584531 | - | 219 | WP_001033078.1 | helix-turn-helix transcriptional regulator | - |
| HXS77_RS17240 () | 3584640..3585287 | + | 648 | WP_001299796.1 | LexA family transcriptional regulator | - |
| HXS77_RS17245 () | 3585437..3585916 | + | 480 | WP_016063144.1 | hypothetical protein | - |
| HXS77_RS17250 () | 3585913..3586845 | + | 933 | WP_016063143.1 | hypothetical protein | - |
| HXS77_RS17255 () | 3587355..3587660 | + | 306 | WP_000256573.1 | hypothetical protein | - |
| HXS77_RS17260 () | 3587663..3588001 | + | 339 | WP_178887758.1 | transcriptional regulator | - |
| HXS77_RS17265 () | 3588205..3588405 | + | 201 | WP_000213975.1 | antirestriction Ral family protein | - |
| HXS77_RS17270 () | 3588445..3588741 | + | 297 | WP_046076629.1 | hypothetical protein | - |
| HXS77_RS17275 () | 3588741..3588941 | + | 201 | WP_000333101.1 | hypothetical protein | - |
| HXS77_RS17280 () | 3589127..3589297 | + | 171 | WP_001183771.1 | hypothetical protein | - |
| HXS77_RS17285 () | 3589382..3589690 | + | 309 | WP_000604111.1 | hypothetical protein | - |
| HXS77_RS17290 () | 3589687..3590598 | + | 912 | WP_004031443.1 | recombinase RecT | - |
| HXS77_RS17295 () | 3590582..3591064 | + | 483 | WP_038348704.1 | siphovirus Gp157 family protein | - |
| HXS77_RS17300 () | 3591076..3591390 | + | 315 | WP_000753555.1 | hypothetical protein | - |
| HXS77_RS17305 () | 3591407..3591571 | + | 165 | WP_097456143.1 | DUF2737 family protein | - |
| HXS77_RS17310 () | 3591568..3592041 | + | 474 | WP_178887760.1 | hypothetical protein | - |
| HXS77_RS17315 () | 3592211..3592543 | + | 333 | Protein_3387 | helix-turn-helix domain-containing protein | - |
| HXS77_RS17320 () | 3592435..3593595 | + | 1161 | WP_178887762.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HXS77_RS17330 () | 3593800..3595053 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HXS77_RS17335 () | 3595065..3596168 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HXS77_RS17340 () | 3596456..3597511 | + | 1056 | WP_000749893.1 | phosphoporin PhoE | - |
| HXS77_RS17345 () | 3597550..3597951 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|