MGE detailed information
MGE type: Prophage MGE length: 138038 bp
Accession: NZ_CP058307 Location: 80595..218632 Organism: Avibacterium paragallinarum strain AVPG2015 Replicon: chromosome
Accession: NZ_CP058307 Location: 80595..218632 Organism: Avibacterium paragallinarum strain AVPG2015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VY92_RS00385 () | 76613..77386 | - | 774 | WP_026138446.1 | acetylglutamate kinase | - |
| VY92_RS00390 () | 77410..78416 | - | 1007 | Protein_77 | N-acetyl-gamma-glutamyl-phosphate reductase | - |
| VY92_RS00395 () | 78531..79682 | + | 1152 | WP_035687937.1 | acetylornithine deacetylase | - |
| VY92_RS00400 () | 80595..80867 | - | 273 | WP_035685195.1 | hypothetical protein | - |
| VY92_RS00405 () | 80845..81498 | - | 654 | WP_035687934.1 | DUF4376 domain-containing protein | - |
| VY92_RS00410 () | 81508..83646 | - | 2139 | WP_046097262.1 | tail fiber protein | - |
| VY92_RS00415 () | 83651..84229 | - | 579 | WP_035688815.1 | DUF2612 domain-containing protein | - |
| VY92_RS00420 () | 84229..85359 | - | 1131 | WP_035688818.1 | baseplate J/gp47 family protein | - |
| VY92_RS00425 () | 85410..85760 | - | 351 | WP_081637558.1 | hypothetical protein | - |
| VY92_RS00430 () | 85757..86404 | - | 648 | WP_081637559.1 | baseplate protein | - |
| VY92_RS00435 () | 86401..87237 | - | 837 | WP_035688821.1 | hypothetical protein | - |
| VY92_RS00440 () | 87401..88281 | + | 881 | Protein_87 | hypothetical protein ; Integrase | Integrase |
| VY92_RS00445 () | 88408..88734 | - | 327 | WP_035688856.1 | hypothetical protein | - |
| VY92_RS00450 () | 89081..89788 | - | 708 | WP_017806205.1 | AAA family ATPase | - |
| VY92_RS00455 () | 89791..90387 | - | 597 | WP_017806206.1 | C39 family peptidase | - |
| VY92_RS00460 () | 90350..91198 | - | 849 | WP_103846642.1 | hemin receptor | - |
| VY92_RS00465 () | 91317..91981 | + | 665 | Protein_92 | hypothetical protein ; Integrase | Integrase |
| VY92_RS00470 () | 92386..93225 | - | 840 | WP_082082221.1 | replication initiation protein | - |
| VY92_RS00475 () | 93201..93503 | - | 303 | WP_035688827.1 | hypothetical protein | - |
| VY92_RS00480 () | 93507..94268 | - | 762 | WP_035688830.1 | hypothetical protein | - |
| VY92_RS00485 () | 94336..94590 | + | 255 | WP_081637560.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| VY92_RS00490 () | 94574..94921 | + | 348 | WP_035688832.1 | helix-turn-helix domain-containing protein | - |
| VY92_RS00495 () | 94924..96858 | - | 1935 | WP_051128129.1 | phage tail tape measure protein | - |
| VY92_RS00500 () | 96988..97413 | - | 426 | WP_017807100.1 | hypothetical protein | - |
| VY92_RS00505 () | 97416..97844 | - | 429 | WP_017807101.1 | DUF3277 family protein | - |
| VY92_RS00510 () | 97854..99356 | - | 1503 | WP_017807102.1 | DUF3383 domain-containing protein | - |
| VY92_RS00515 () | 99360..99872 | - | 513 | WP_051052690.1 | hypothetical protein | - |
| VY92_RS00520 () | 99796..100143 | - | 348 | WP_017807104.1 | hypothetical protein | - |
| VY92_RS00525 () | 100140..100583 | - | 444 | WP_035688835.1 | hypothetical protein | - |
| VY92_RS00530 () | 100580..100930 | - | 351 | WP_017807106.1 | DUF4054 domain-containing protein | - |
| VY92_RS00535 () | 100939..101841 | - | 903 | WP_035688838.1 | DUF2184 domain-containing protein | - |
| VY92_RS00540 () | 101854..102306 | - | 453 | WP_017807108.1 | hypothetical protein | - |
| VY92_RS00545 () | 102306..103427 | - | 1122 | WP_017807109.1 | DUF2213 domain-containing protein | - |
| VY92_RS00550 () | 103495..103776 | - | 282 | WP_017807110.1 | hypothetical protein | - |
| VY92_RS00555 () | 103779..105176 | - | 1398 | WP_051185301.1 | minor capsid protein | - |
| VY92_RS00560 () | 105097..106413 | - | 1317 | WP_046097263.1 | DUF1073 domain-containing protein | - |
| VY92_RS00565 () | 106410..107759 | - | 1350 | WP_046097264.1 | PBSX family phage terminase large subunit | - |
| VY92_RS00570 () | 107740..108267 | - | 528 | WP_017806476.1 | terminase small subunit | - |
| VY92_RS00575 () | 108278..108532 | - | 255 | WP_021723600.1 | hypothetical protein | - |
| VY92_RS00580 () | 108516..108728 | - | 213 | WP_017806474.1 | hypothetical protein | - |
| VY92_RS00585 () | 108697..108981 | - | 285 | WP_158609869.1 | DUF2570 family protein | - |
| VY92_RS00590 () | 109019..109426 | - | 408 | WP_017807118.1 | M15 family metallopeptidase | - |
| VY92_RS00595 () | 109419..109751 | - | 333 | WP_017807585.1 | phage holin, lambda family | - |
| VY92_RS00600 () | 109855..110397 | + | 543 | WP_046097541.1 | hypothetical protein | - |
| VY92_RS00605 () | 110663..111175 | - | 513 | WP_017807600.1 | hypothetical protein | - |
| VY92_RS00610 () | 111359..111763 | - | 405 | WP_035689440.1 | hypothetical protein | - |
| VY92_RS00615 () | 111754..112359 | - | 606 | WP_035689442.1 | recombination protein NinG | - |
| VY92_RS00620 () | 112668..113321 | + | 654 | WP_035689454.1 | hypothetical protein | - |
| VY92_RS00625 () | 113359..113784 | - | 426 | WP_046097538.1 | recombination protein NinB | - |
| VY92_RS00630 () | 113893..114576 | - | 684 | WP_052716809.1 | hypothetical protein | - |
| VY92_RS00635 () | 114573..115379 | - | 807 | WP_035689420.1 | helix-turn-helix domain-containing protein | - |
| VY92_RS00640 () | 115376..116146 | - | 771 | WP_035689423.1 | phage regulatory protein/antirepressor Ant | - |
| VY92_RS00645 () | 116260..116667 | + | 408 | WP_046097546.1 | hypothetical protein | - |
| VY92_RS00650 () | 116685..117125 | - | 441 | WP_017806454.1 | hypothetical protein | - |
| VY92_RS00655 () | 117174..117395 | - | 222 | WP_046097532.1 | hypothetical protein | - |
| VY92_RS00660 () | 117495..118160 | + | 666 | WP_046097547.1 | XRE family transcriptional regulator | - |
| VY92_RS00665 () | 118335..118874 | + | 540 | WP_017807413.1 | hypothetical protein | - |
| VY92_RS00670 () | 118871..119635 | + | 765 | WP_017807412.1 | DUF1828 domain-containing protein | - |
| VY92_RS00675 () | 119979..120149 | - | 171 | WP_017807323.1 | DUF1508 domain-containing protein | - |
| VY92_RS00680 () | 120164..120385 | + | 222 | WP_035689240.1 | hypothetical protein | - |
| VY92_RS00685 () | 121058..121702 | + | 645 | WP_051128137.1 | hypothetical protein | - |
| VY92_RS00690 () | 121796..122104 | + | 309 | WP_046097548.1 | hypothetical protein | - |
| VY92_RS00695 () | 122126..122401 | + | 276 | WP_035689243.1 | hypothetical protein | - |
| VY92_RS00700 () | 122391..123065 | + | 675 | WP_051128138.1 | hypothetical protein | - |
| VY92_RS00705 () | 123280..124191 | + | 912 | WP_178285685.1 | hypothetical protein | - |
| VY92_RS00710 () | 124125..124394 | - | 270 | WP_178285664.1 | hypothetical protein | - |
| VY92_RS00715 () | 124482..124994 | - | 513 | WP_017807600.1 | hypothetical protein | - |
| VY92_RS00720 () | 125178..125582 | - | 405 | WP_035689440.1 | hypothetical protein | - |
| VY92_RS00725 () | 125573..126178 | - | 606 | WP_035689442.1 | recombination protein NinG | - |
| VY92_RS00730 () | 126487..127140 | + | 654 | WP_035689454.1 | hypothetical protein | - |
| VY92_RS00735 () | 127178..127603 | - | 426 | WP_046097538.1 | recombination protein NinB | - |
| VY92_RS00740 () | 127712..128395 | - | 684 | WP_052716809.1 | hypothetical protein | - |
| VY92_RS00745 () | 128392..129198 | - | 807 | WP_035689420.1 | helix-turn-helix domain-containing protein | - |
| VY92_RS00750 () | 129195..129965 | - | 771 | WP_046097539.1 | phage regulatory protein/antirepressor Ant | - |
| VY92_RS00755 () | 130012..130488 | - | 477 | WP_046097540.1 | hypothetical protein | - |
| VY92_RS00760 () | 130530..130822 | - | 293 | Protein_151 | hypothetical protein | - |
| VY92_RS00765 () | 130845..131042 | - | 198 | WP_178285665.1 | helix-turn-helix domain-containing protein | - |
| VY92_RS00770 () | 131161..131912 | + | 752 | Protein_153 | helix-turn-helix transcriptional regulator | - |
| VY92_RS00775 () | 132089..132601 | + | 513 | WP_017807600.1 | hypothetical protein | - |
| VY92_RS00780 () | 132689..133006 | + | 318 | WP_130239081.1 | hypothetical protein | - |
| VY92_RS00785 () | 133161..133493 | + | 333 | WP_017807585.1 | phage holin, lambda family | - |
| VY92_RS00790 () | 133486..133893 | + | 408 | WP_017807118.1 | M15 family metallopeptidase | - |
| VY92_RS00795 () | 133931..134215 | + | 285 | WP_158609869.1 | DUF2570 family protein | - |
| VY92_RS00800 () | 134184..134396 | + | 213 | WP_017806474.1 | hypothetical protein | - |
| VY92_RS00805 () | 134380..134634 | + | 255 | WP_021723600.1 | hypothetical protein | - |
| VY92_RS00810 () | 134645..135172 | + | 528 | WP_017806476.1 | terminase small subunit | - |
| VY92_RS00815 () | 135153..136502 | + | 1350 | WP_046097305.1 | PBSX family phage terminase large subunit | - |
| VY92_RS00820 () | 136505..137812 | + | 1308 | WP_035685212.1 | DUF1073 domain-containing protein | - |
| VY92_RS00825 () | 137757..138479 | + | 723 | Protein_164 | minor capsid protein | - |
| VY92_RS00830 () | 138935..139369 | + | 435 | WP_017805963.1 | hypothetical protein | - |
| VY92_RS00835 () | 139457..140512 | + | 1056 | WP_035685209.1 | DUF2213 domain-containing protein | - |
| VY92_RS00840 () | 140524..140940 | + | 417 | WP_017805961.1 | hypothetical protein | - |
| VY92_RS00845 () | 141014..141967 | + | 954 | WP_017805960.1 | DUF2184 domain-containing protein | - |
| VY92_RS00850 () | 141967..142101 | + | 135 | Protein_169 | DNA-binding protein | - |
| VY92_RS00855 () | 142198..142551 | + | 354 | WP_017805958.1 | DUF4054 domain-containing protein | - |
| VY92_RS00860 () | 142535..142993 | + | 459 | WP_035685207.1 | hypothetical protein | - |
| VY92_RS00865 () | 142993..143352 | + | 360 | WP_017805956.1 | hypothetical protein | - |
| VY92_RS00870 () | 143354..143863 | + | 510 | WP_017805955.1 | hypothetical protein | - |
| VY92_RS00875 () | 143850..144923 | + | 1074 | WP_017805954.1 | DUF3383 family protein | - |
| VY92_RS00880 () | 144975..145403 | + | 429 | WP_017805953.1 | DUF3277 family protein | - |
| VY92_RS00885 () | 145403..145888 | + | 486 | WP_017805952.1 | hypothetical protein | - |
| VY92_RS00890 () | 145924..146076 | + | 153 | WP_017805951.1 | hypothetical protein | - |
| VY92_RS00895 () | 146073..148331 | + | 2259 | WP_017805950.1 | tape measure protein | - |
| VY92_RS00900 () | 148369..148788 | - | 420 | WP_017805949.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| VY92_RS00905 () | 148832..149014 | - | 183 | WP_017805948.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| VY92_RS00910 () | 149104..149697 | + | 594 | WP_035685204.1 | hypothetical protein | - |
| VY92_RS00915 () | 149829..150980 | + | 1152 | WP_017805946.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| VY92_RS00920 () | 151284..152108 | + | 825 | WP_046097306.1 | phage antirepressor N-terminal domain-containing protein | - |
| VY92_RS00925 () | 152216..152548 | + | 333 | WP_017805944.1 | hypothetical protein | - |
| VY92_RS00930 () | 152526..153491 | + | 966 | WP_035685202.1 | hypothetical protein | - |
| VY92_RS00935 () | 153484..154155 | + | 672 | WP_017805942.1 | phage baseplate protein | - |
| VY92_RS00940 () | 154152..154517 | + | 366 | WP_017805941.1 | hypothetical protein | - |
| VY92_RS00945 () | 154510..155946 | + | 1437 | WP_035685201.1 | baseplate J/gp47 family protein | - |
| VY92_RS00950 () | 155955..156569 | + | 615 | WP_017805938.1 | DUF2612 domain-containing protein | - |
| VY92_RS00955 () | 156579..158276 | + | 1698 | WP_046097307.1 | tail fiber protein | - |
| VY92_RS00960 () | 158422..158901 | + | 480 | Protein_191 | DUF4376 domain-containing protein | - |
| VY92_RS00965 () | 158879..159151 | + | 273 | WP_035685195.1 | hypothetical protein | - |
| VY92_RS00970 () | 160049..161671 | - | 1623 | WP_046097308.1 | hypothetical protein | - |
| VY92_RS00975 () | 161668..162252 | - | 585 | WP_035688495.1 | hypothetical protein | - |
| VY92_RS00980 () | 162249..162998 | - | 750 | WP_035688494.1 | hypothetical protein | - |
| VY92_RS00985 () | 163019..163288 | - | 270 | WP_035695526.1 | hypothetical protein | - |
| VY92_RS00990 () | 163266..163904 | - | 639 | WP_046097309.1 | DUF4376 domain-containing protein | - |
| VY92_RS00995 () | 163920..166664 | - | 2745 | WP_052716791.1 | phage tail protein | - |
| VY92_RS01000 () | 166690..167217 | - | 528 | WP_026138599.1 | phage tail protein | - |
| VY92_RS01005 () | 167217..168386 | - | 1170 | WP_017807158.1 | baseplate J/gp47 family protein | - |
| VY92_RS01010 () | 168379..168711 | - | 333 | WP_035688567.1 | DUF2590 family protein | - |
| VY92_RS01015 () | 168713..170806 | - | 2094 | WP_035688568.1 | phage tail tape measure protein | - |
| VY92_RS01020 () | 170815..170976 | - | 162 | WP_017807155.1 | hypothetical protein | - |
| VY92_RS01025 () | 170994..171293 | - | 300 | WP_035688569.1 | hypothetical protein | - |
| VY92_RS01030 () | 171315..171536 | - | 222 | WP_178285666.1 | Rz1-like lysis system protein LysC | - |
| VY92_RS01035 () | 171502..171843 | - | 342 | WP_051128122.1 | hypothetical protein | - |
| VY92_RS01040 () | 171828..172361 | - | 534 | WP_081637554.1 | lysozyme | - |
| VY92_RS01045 () | 172333..172566 | - | 234 | WP_017807151.1 | hypothetical protein | - |
| VY92_RS01050 () | 172653..173108 | - | 456 | WP_017807150.1 | DUF2597 family protein | - |
| VY92_RS01055 () | 173113..174240 | - | 1128 | WP_035688573.1 | DUF2586 family protein | - |
| VY92_RS01060 () | 174266..174946 | - | 681 | WP_035688575.1 | phage virion morphogenesis protein | - |
| VY92_RS01065 () | 174939..175409 | - | 471 | WP_035688577.1 | phage tail protein | - |
| VY92_RS01070 () | 175397..175849 | - | 453 | WP_017807147.1 | head completion/stabilization protein | - |
| VY92_RS01075 () | 175842..176663 | - | 822 | WP_035688579.1 | terminase | - |
| VY92_RS01080 () | 176674..177684 | - | 1011 | WP_035688581.1 | phage major capsid protein, P2 family | - |
| VY92_RS01085 () | 177687..178586 | - | 900 | WP_035688583.1 | GPO family capsid scaffolding protein | - |
| VY92_RS01090 () | 178765..180561 | + | 1797 | WP_035688585.1 | terminase family protein | - |
| VY92_RS01095 () | 180565..181602 | + | 1038 | WP_035688587.1 | phage portal protein | - |
| VY92_RS01100 () | 181682..181936 | + | 255 | WP_046097310.1 | ogr/Delta-like zinc finger family protein | - |
| VY92_RS01105 () | 182246..182473 | + | 228 | WP_017807140.1 | hypothetical protein | - |
| VY92_RS01110 () | 182678..182917 | - | 240 | WP_035688589.1 | hypothetical protein | - |
| VY92_RS01115 () | 182945..183085 | - | 141 | WP_156127759.1 | hypothetical protein | - |
| VY92_RS01120 () | 183193..183666 | - | 474 | WP_035688619.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| VY92_RS01125 () | 183737..184282 | - | 546 | WP_035688593.1 | phage N-6-adenine-methyltransferase | - |
| VY92_RS01130 () | 184315..186702 | - | 2388 | WP_046097311.1 | replication endonuclease | - |
| VY92_RS01135 () | 186724..187002 | - | 279 | WP_035688595.1 | hypothetical protein | - |
| VY92_RS01140 () | 186999..187205 | - | 207 | WP_035688597.1 | hypothetical protein | - |
| VY92_RS01145 () | 187192..187395 | - | 204 | WP_152436197.1 | hypothetical protein | - |
| VY92_RS01150 () | 187598..188074 | - | 477 | WP_035688601.1 | hypothetical protein | - |
| VY92_RS01155 () | 188132..188347 | - | 216 | WP_035688603.1 | DNA-binding protein | - |
| VY92_RS01160 () | 188471..189052 | + | 582 | WP_035688605.1 | phage repressor protein CI | - |
| VY92_RS01165 () | 189049..189906 | + | 858 | WP_152436196.1 | hypothetical protein | - |
| VY92_RS01170 () | 189910..190929 | + | 1020 | WP_035688609.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| VY92_RS01175 () | 191572..191895 | + | 324 | WP_017807029.1 | ribosome-associated translation inhibitor RaiA | - |
| VY92_RS01180 () | 192070..192753 | + | 684 | WP_017807028.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| VY92_RS01185 () | 192746..193171 | + | 426 | WP_035688639.1 | 6-carboxytetrahydropterin synthase QueD | - |
| VY92_RS01190 () | 193171..193797 | + | 627 | WP_035688634.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| VY92_RS01195 () | 194294..194545 | + | 252 | WP_124994912.1 | IS3 family transposase | - |
| VY92_RS01200 () | 195218..195865 | - | 648 | WP_035688632.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| VY92_RS01205 () | 195862..196659 | - | 798 | WP_035688630.1 | Polysialic acid transport protein KpsM | VF |
| VY92_RS01210 () | 196659..197801 | - | 1143 | WP_046097312.1 | hypothetical protein | VF |
| VY92_RS01215 () | 197811..198977 | - | 1167 | WP_035688629.1 | hypothetical protein | VF |
| VY92_RS01220 () | 199084..200520 | - | 1437 | WP_051128123.1 | Putative glycosyltransferase EpsE | VF |
| VY92_RS01225 () | 200510..201682 | - | 1173 | WP_017807035.1 | UDP-glucose 6-dehydrogenase | VF |
| VY92_RS01230 () | 202057..202785 | - | 729 | WP_046097314.1 | hypothetical protein | - |
| VY92_RS01235 () | 202788..203042 | - | 255 | WP_046097315.1 | hypothetical protein | - |
| VY92_RS01240 () | 203083..204336 | - | 1254 | WP_046097316.1 | Putative glycosyltransferase EpsE | VF |
| VY92_RS01245 () | 204326..205987 | - | 1662 | WP_046097317.1 | hypothetical protein | VF |
| VY92_RS01250 () | 206317..208347 | + | 2031 | WP_035687045.1 | hypothetical protein | VF |
| VY92_RS01255 () | 208377..209606 | + | 1230 | WP_035687043.1 | hypothetical protein | VF |
| VY92_RS01260 () | 209835..209975 | + | 141 | Protein_251 | radical SAM protein | - |
| VY92_RS01265 () | 210017..210835 | - | 819 | WP_017807041.1 | DNA ligase | - |
| VY92_RS01270 () | 211118..211921 | + | 804 | WP_017807042.1 | glucosamine-6-phosphate deaminase | - |
| VY92_RS01275 () | 211936..213081 | + | 1146 | WP_035687040.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| VY92_RS01280 () | 213277..213762 | - | 486 | WP_046097356.1 | tRNA adenosine(34) deaminase TadA | - |
| VY92_RS01285 () | 213862..214713 | - | 852 | WP_017807045.1 | thymidylate synthase | - |
| VY92_RS01290 () | 214725..215525 | - | 801 | WP_035687035.1 | prolipoprotein diacylglyceryl transferase | - |
| VY92_RS01295 () | 215535..216326 | - | 792 | WP_035687031.1 | sulfite exporter TauE/SafE family protein | - |
| VY92_RS01300 () | 216329..216922 | - | 594 | WP_035687029.1 | RNA pyrophosphohydrolase | - |
| VY92_RS01305 () | 217494..217913 | - | 420 | WP_124994872.1 | hypothetical protein | - |
| VY92_RS01310 () | 218012..218566 | - | 555 | WP_035687059.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| VY92_RS01315 () | 218706..219137 | + | 432 | WP_035687024.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| VY92_RS01320 () | 219150..220574 | + | 1425 | WP_035687022.1 | GspE/PulE family protein | - |
| VY92_RS01325 () | 220824..221540 | + | 717 | WP_035687020.1 | UMP kinase | - |
| VY92_RS01330 () | 221565..222122 | + | 558 | WP_017807054.1 | ribosome recycling factor | - |
| VY92_RS01335 () | 222302..223498 | + | 1197 | WP_035687018.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|