MGE detailed information
MGE type: Prophage MGE length: 36260 bp
Accession: NZ_CP058207 Location: 2638692..2674951 Organism: Escherichia marmotae strain RHB42-C09 Replicon: chromosome
Accession: NZ_CP058207 Location: 2638692..2674951 Organism: Escherichia marmotae strain RHB42-C09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV018_RS12415 () | 2634157..2634567 | + | 411 | WP_181236726.1 | flagellar export chaperone FliS | - |
| HV018_RS12420 () | 2634567..2634932 | + | 366 | WP_181236728.1 | flagella biosynthesis regulatory protein FliT | - |
| HV018_RS12425 () | 2635010..2636497 | + | 1488 | WP_001516566.1 | alpha-amylase | - |
| HV018_RS12430 () | 2636531..2636944 | - | 414 | WP_001516567.1 | lipoprotein | - |
| HV018_RS12435 () | 2637131..2638336 | + | 1206 | WP_001516568.1 | selenium metabolism membrane protein YedE/FdhT | - |
| HV018_RS12440 () | 2638333..2638566 | + | 234 | WP_000790504.1 | sulfurtransferase-like selenium metabolism protein YedF | - |
| HV018_RS12445 () | 2638692..2639339 | - | 648 | WP_001516569.1 | metal-binding protein ZinT | - |
| HV018_RS12450 () | 2639667..2640071 | + | 405 | WP_000373061.1 | DUF1398 domain-containing protein | - |
| HV018_RS12455 () | 2640264..2640665 | + | 402 | WP_016248822.1 | PPC domain-containing protein | - |
| HV018_RS12460 () | 2641654..2642886 | + | 1233 | WP_000162952.1 | hypothetical protein | - |
| HV018_RS12465 () | 2643015..2643134 | - | 120 | Protein_2434 | tail fiber assembly protein | - |
| HV018_RS12470 () | 2643154..2643447 | - | 294 | WP_000355602.1 | hypothetical protein | - |
| HV018_RS12475 () | 2643490..2644530 | - | 1041 | WP_181236730.1 | tail fiber domain-containing protein | - |
| HV018_RS12480 () | 2644540..2644821 | - | 282 | WP_001550853.1 | hypothetical protein | - |
| HV018_RS12485 () | 2644818..2647217 | - | 2400 | WP_181236732.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV018_RS12490 () | 2647282..2647881 | - | 600 | WP_097482084.1 | hypothetical protein | VF |
| HV018_RS12495 () | 2647951..2651364 | - | 3414 | WP_181236734.1 | host specificity protein J | - |
| HV018_RS12500 () | 2651425..2652057 | - | 633 | WP_000090908.1 | tail assembly protein | - |
| HV018_RS12505 () | 2651994..2652737 | - | 744 | WP_181236736.1 | C40 family peptidase | - |
| HV018_RS12510 () | 2652743..2653441 | - | 699 | WP_016248617.1 | phage minor tail protein L | - |
| HV018_RS12515 () | 2653441..2653770 | - | 330 | WP_000847401.1 | phage tail protein | - |
| HV018_RS12520 () | 2653767..2656346 | - | 2580 | Protein_2445 | phage tail tape measure protein | - |
| HV018_RS12525 () | 2656339..2656773 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| HV018_RS12530 () | 2656755..2657177 | - | 423 | WP_181236738.1 | phage minor tail protein G | - |
| HV018_RS12535 () | 2657193..2657933 | - | 741 | WP_053896173.1 | phage tail protein | - |
| HV018_RS12540 () | 2657941..2658336 | - | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| HV018_RS12545 () | 2658333..2658911 | - | 579 | WP_000975070.1 | phage tail protein | - |
| HV018_RS12550 () | 2658923..2659276 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| HV018_RS12555 () | 2659288..2659686 | - | 399 | WP_181236739.1 | DNA-packaging protein FI | - |
| HV018_RS12560 () | 2659728..2660753 | - | 1026 | WP_000063256.1 | major capsid protein | - |
| HV018_RS12565 () | 2660809..2661141 | - | 333 | WP_001299443.1 | head decoration protein | - |
| HV018_RS12570 () | 2661151..2662470 | - | 1320 | WP_000123317.1 | S49 family peptidase | - |
| HV018_RS12575 () | 2662451..2664052 | - | 1602 | WP_001379565.1 | phage portal protein | - |
| HV018_RS12580 () | 2664049..2664255 | - | 207 | WP_000198149.1 | gpW family protein | - |
| HV018_RS12585 () | 2664252..2666177 | - | 1926 | WP_001027290.1 | phage terminase large subunit family protein | - |
| HV018_RS12590 () | 2666152..2666697 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HV018_RS12595 () | 2666845..2667542 | - | 698 | Protein_2460 | IS1 family transposase IS1R | Transposase |
| HV018_RS12600 () | 2667699..2668514 | - | 816 | WP_001572439.1 | HNH endonuclease | - |
| HV018_RS12605 () | 2668527..2668937 | - | 411 | WP_000985911.1 | hypothetical protein | - |
| HV018_RS12610 () | 2669039..2669245 | - | 207 | WP_000134171.1 | hypothetical protein | - |
| HV018_RS12615 () | 2669306..2670631 | - | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| HV018_RS12620 () | 2670636..2670929 | - | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HV018_RS12625 () | 2671158..2674145 | - | 2988 | WP_096200186.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HV018_RS12630 () | 2674313..2674951 | + | 639 | WP_096200184.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HV018_RS12635 () | 2675079..2676212 | - | 1134 | WP_181236741.1 | permease | - |
| HV018_RS12640 () | 2676319..2676612 | + | 294 | WP_080213601.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HV018_RS12645 () | 2676743..2677453 | + | 711 | WP_096200180.1 | arsenical resistance protein ArsH | - |
| HV018_RS12650 () | 2677584..2678009 | - | 426 | WP_019213439.1 | glutaredoxin-dependent arsenate reductase | - |
| HV018_RS12655 () | 2678022..2679311 | - | 1290 | WP_096200178.1 | arsenite efflux transporter membrane subunit ArsB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|