MGE detailed information
MGE type: Prophage MGE length: 46948 bp
Accession: NZ_CP056968 Location: 1900698..1947645 Organism: Escherichia fergusonii strain RHB41-C15 Replicon: chromosome
Accession: NZ_CP056968 Location: 1900698..1947645 Organism: Escherichia fergusonii strain RHB41-C15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV010_RS09240 () | 1896192..1896710 | - | 519 | WP_001217010.1 | hypothetical protein | - |
| HV010_RS09245 () | 1896710..1897528 | - | 819 | WP_046080813.1 | winged helix-turn-helix domain-containing protein | - |
| HV010_RS09250 () | 1897551..1898129 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| HV010_RS09260 () | 1898711..1900147 | + | 1437 | Protein_1800 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| HV010_RS09270 () | 1900698..1902002 | + | 1305 | WP_000378537.1 | shikimate transporter | - |
| HV010_RS09275 () | 1902130..1903584 | + | 1455 | WP_181588670.1 | AMP nucleosidase | - |
| HV010_RS09280 () | 1903684..1904782 | - | 1099 | Protein_1803 | ISAs1 family transposase | - |
| HV010_RS09290 () | 1906025..1906174 | - | 150 | Protein_1805 | DUF4102 domain-containing protein | - |
| HV010_RS09300 () | 1906743..1907660 | + | 918 | WP_001011449.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HV010_RS09305 () | 1907762..1908712 | + | 951 | WP_181588672.1 | HTH-type transcriptional regulator Cbl | - |
| HV010_RS09315 () | 1908927..1909724 | - | 798 | WP_000598929.1 | DgsA anti-repressor MtfA | - |
| HV010_RS09325 () | 1909960..1910985 | - | 1026 | WP_000533615.1 | tyrosine-type recombinase/integrase | - |
| HV010_RS09330 () | 1910985..1911188 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| HV010_RS09335 () | 1911247..1913718 | - | 2472 | WP_021525674.1 | exonuclease | - |
| HV010_RS09340 () | 1913842..1914063 | - | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| HV010_RS09345 () | 1914630..1914905 | + | 276 | WP_000505224.1 | hypothetical protein | - |
| HV010_RS09350 () | 1914874..1915203 | - | 330 | WP_000394536.1 | hypothetical protein | - |
| HV010_RS09355 () | 1915226..1915444 | - | 219 | WP_001171946.1 | hypothetical protein | - |
| HV010_RS09360 () | 1915604..1915759 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HV010_RS09365 () | 1916052..1916390 | - | 339 | WP_001397087.1 | peptidase S24-like family protein | - |
| HV010_RS09370 () | 1916782..1917024 | + | 243 | WP_000747951.1 | hypothetical protein | - |
| HV010_RS09375 () | 1917008..1917433 | + | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| HV010_RS09380 () | 1917505..1918575 | + | 1071 | WP_096488174.1 | phage replisome organizer | - |
| HV010_RS09385 () | 1918616..1919041 | + | 426 | WP_001151224.1 | DUF977 family protein | - |
| HV010_RS09390 () | 1919216..1919881 | + | 666 | WP_000150294.1 | epoxyqueuosine reductase QueH | - |
| - () | 1920049..1920107 | - | 59 | - | - | Antitoxin Detail |
| HV010_RS09395 () | 1920119..1920274 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| HV010_RS09400 () | 1920442..1920714 | + | 273 | WP_032348564.1 | hypothetical protein | - |
| HV010_RS09405 () | 1920716..1921765 | + | 1050 | WP_024190197.1 | DUF968 domain-containing protein | - |
| HV010_RS09410 () | 1921778..1922137 | + | 360 | WP_000904122.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV010_RS09415 () | 1922134..1922823 | + | 690 | WP_001064894.1 | antiterminator | - |
| HV010_RS09440 () | 1923620..1923835 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| HV010_RS09445 () | 1923840..1924154 | + | 315 | WP_000193273.1 | YdfR family protein | - |
| HV010_RS09450 () | 1924210..1924743 | + | 534 | WP_001274714.1 | lysozyme | - |
| HV010_RS09455 () | 1924960..1925145 | + | 186 | WP_001228685.1 | Rz1 family lipoprotein | - |
| HV010_RS09460 () | 1925386..1925871 | - | 486 | WP_001114684.1 | GNAT family N-acetyltransferase | - |
| HV010_RS09465 () | 1926116..1926316 | + | 201 | WP_000671994.1 | hypothetical protein | - |
| HV010_RS09470 () | 1926324..1926674 | + | 351 | WP_001140099.1 | HNH endonuclease | - |
| HV010_RS09475 () | 1926823..1927305 | + | 483 | WP_001317918.1 | phage terminase small subunit P27 family | - |
| HV010_RS09480 () | 1927305..1929062 | + | 1758 | WP_001140901.1 | terminase large subunit | - |
| HV010_RS09485 () | 1929074..1929256 | + | 183 | WP_000478567.1 | hypothetical protein | - |
| HV010_RS09490 () | 1929256..1930497 | + | 1242 | WP_000466272.1 | phage portal protein | - |
| HV010_RS09495 () | 1930475..1931125 | + | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| HV010_RS09500 () | 1931140..1932345 | + | 1206 | WP_000257488.1 | phage major capsid protein | - |
| HV010_RS09505 () | 1932397..1932585 | + | 189 | WP_000601355.1 | hypothetical protein | - |
| HV010_RS09510 () | 1932597..1932902 | + | 306 | WP_000983037.1 | head-tail connector protein | - |
| HV010_RS09515 () | 1932911..1933249 | + | 339 | WP_001147820.1 | phage head closure protein | - |
| HV010_RS09520 () | 1933249..1933695 | + | 447 | WP_000347790.1 | HK97 gp10 family phage protein | - |
| HV010_RS09525 () | 1933692..1934036 | + | 345 | WP_001209399.1 | DUF3168 domain-containing protein | - |
| HV010_RS09530 () | 1934096..1934800 | + | 705 | WP_000097533.1 | hypothetical protein | - |
| HV010_RS09535 () | 1934815..1935186 | + | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| HV010_RS09540 () | 1935210..1935488 | + | 279 | WP_099156450.1 | DUF4035 domain-containing protein | - |
| HV010_RS09545 () | 1935535..1938762 | + | 3228 | WP_001552446.1 | phage tail tape measure protein | - |
| HV010_RS09550 () | 1938740..1939096 | + | 357 | WP_001330090.1 | phage tail protein | - |
| HV010_RS09555 () | 1939096..1939794 | + | 699 | WP_001152449.1 | phage minor tail protein L | - |
| HV010_RS09560 () | 1939800..1940543 | + | 744 | WP_000140743.1 | C40 family peptidase | - |
| HV010_RS09565 () | 1940480..1941088 | + | 609 | WP_014639483.1 | tail assembly protein | - |
| HV010_RS09570 () | 1941149..1944847 | + | 3699 | WP_000515673.1 | DUF1983 domain-containing protein | - |
| HV010_RS09575 () | 1944915..1945514 | + | 600 | WP_001233170.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| HV010_RS09580 () | 1945579..1947645 | + | 2067 | WP_096488173.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV010_RS09585 () | 1947642..1947920 | + | 279 | WP_001204579.1 | hypothetical protein | - |
| HV010_RS09590 () | 1947930..1948220 | + | 291 | WP_000355702.1 | hypothetical protein | - |
| HV010_RS09595 () | 1948720..1949433 | + | 714 | WP_000358619.1 | cytolethal distending toxin type I subunit CdtA | - |
| HV010_RS09600 () | 1949430..1950251 | + | 822 | WP_000734593.1 | cytolethal distending toxin type I nuclease subunit CdtB | - |
| HV010_RS09605 () | 1950248..1950820 | + | 573 | WP_000859544.1 | cytolethal distending toxin type I subunit CdtC | - |
| HV010_RS09610 () | 1951564..1952415 | - | 852 | WP_181588673.1 | protein deglycase HchA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|