MGE detailed information
MGE type: Prophage MGE length: 55270 bp
Accession: NZ_CP056961 Location: 332511..387780 Organism: Escherichia fergusonii strain RHB41-C20 Replicon: chromosome
Accession: NZ_CP056961 Location: 332511..387780 Organism: Escherichia fergusonii strain RHB41-C20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV012_RS01535 () | 328004..328501 | + | 498 | WP_000019212.1 | chorismate lyase | - |
| HV012_RS01540 () | 328514..329386 | + | 873 | WP_000455219.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| HV012_RS01545 () | 329442..331862 | - | 2421 | WP_181588229.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| HV012_RS01550 () | 332033..332401 | + | 369 | WP_181588230.1 | diacylglycerol kinase | - |
| HV012_RS01555 () | 332511..333119 | + | 609 | WP_000646099.1 | transcriptional repressor LexA | - |
| HV012_RS01560 () | 333192..334517 | + | 1326 | WP_181588231.1 | MATE family efflux transporter DinF | - |
| HV012_RS01565 () | 334649..334858 | + | 210 | WP_001030605.1 | CsbD family protein | - |
| HV012_RS01570 () | 334909..335424 | - | 516 | WP_181588232.1 | zinc uptake transcriptional repressor Zur | - |
| HV012_RS01575 () | 335905..336477 | + | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| HV012_RS01580 () | 336507..336893 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| HV012_RS01585 () | 336933..337106 | + | 174 | WP_000390072.1 | hypothetical protein | - |
| HV012_RS01590 () | 337154..337435 | - | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| HV012_RS01595 () | 337472..338044 | - | 573 | WP_001061348.1 | 3'-5' exoribonuclease | - |
| HV012_RS01600 () | 338044..338853 | - | 810 | WP_000206745.1 | hypothetical protein | - |
| HV012_RS01605 () | 338853..339215 | - | 363 | WP_001242749.1 | phage protein | - |
| HV012_RS01610 () | 339206..339742 | - | 537 | WP_062858077.1 | 5'-deoxynucleotidase | - |
| HV012_RS01615 () | 339870..340694 | - | 825 | WP_001569327.1 | DUF2303 family protein | - |
| HV012_RS01620 () | 340760..341122 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| HV012_RS01625 () | 341691..342185 | + | 495 | WP_097469122.1 | hypothetical protein | - |
| HV012_RS01630 () | 342758..343444 | - | 687 | WP_000853321.1 | helix-turn-helix transcriptional regulator | - |
| HV012_RS01635 () | 343582..343830 | + | 249 | WP_000187186.1 | helix-turn-helix domain-containing protein | - |
| HV012_RS01640 () | 343853..344410 | + | 558 | WP_000515871.1 | hypothetical protein | - |
| HV012_RS01645 () | 344586..344798 | + | 213 | WP_112048765.1 | DUF4222 domain-containing protein | - |
| HV012_RS01650 () | 344755..345747 | + | 993 | WP_181588233.1 | hypothetical protein | - |
| HV012_RS01655 () | 345744..346238 | + | 495 | WP_077782549.1 | PerC family transcriptional regulator | - |
| HV012_RS01660 () | 346238..346891 | + | 654 | WP_001407083.1 | phage N-6-adenine-methyltransferase | - |
| HV012_RS01665 () | 346888..347214 | + | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| HV012_RS01670 () | 347211..347600 | + | 390 | WP_016240453.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV012_RS01675 () | 347620..348429 | + | 810 | WP_089624698.1 | KilA-N domain-containing protein | - |
| HV012_RS01680 () | 348437..349426 | + | 990 | WP_001529527.1 | DUF968 domain-containing protein | - |
| HV012_RS01685 () | 349444..349809 | + | 366 | WP_001204819.1 | antitermination protein | - |
| HV012_RS01690 () | 349894..350340 | - | 447 | WP_181588234.1 | hypothetical protein | - |
| HV012_RS01695 () | 350611..350814 | + | 204 | WP_000917723.1 | hypothetical protein | - |
| HV012_RS01700 () | 350965..352017 | + | 1053 | WP_000799653.1 | site-specific DNA-methyltransferase | - |
| HV012_RS01705 () | 352085..352300 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| HV012_RS01710 () | 352300..352797 | + | 498 | WP_001135251.1 | lysozyme RrrD | - |
| HV012_RS01715 () | 352794..353261 | + | 468 | WP_032339206.1 | lysis protein | - |
| HV012_RS01720 () | 353249..353401 | + | 153 | WP_001139681.1 | hypothetical protein | - |
| HV012_RS01725 () | 354075..354614 | + | 540 | WP_000421824.1 | DUF1441 family protein | - |
| HV012_RS01730 () | 354623..356722 | + | 2100 | WP_000507031.1 | phage terminase large subunit family protein | - |
| HV012_RS01735 () | 356719..356931 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| HV012_RS01740 () | 356859..358439 | + | 1581 | WP_011478361.1 | phage portal protein | - |
| HV012_RS01745 () | 358384..360411 | + | 2028 | WP_181588235.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HV012_RS01750 () | 360498..360821 | + | 324 | WP_001097039.1 | DUF2190 family protein | - |
| HV012_RS01755 () | 360814..361089 | + | 276 | WP_181588236.1 | DNA breaking-rejoining protein | - |
| HV012_RS01760 () | 361101..361691 | + | 591 | WP_000677120.1 | phage tail protein | - |
| HV012_RS01765 () | 361688..362089 | + | 402 | WP_001079410.1 | phage minor tail U family protein | - |
| HV012_RS01770 () | 362100..362843 | + | 744 | WP_000211124.1 | phage tail protein | - |
| HV012_RS01775 () | 362904..363290 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| HV012_RS01780 () | 363299..363628 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| HV012_RS01785 () | 363600..366674 | + | 3075 | WP_119188362.1 | phage tail tape measure protein | - |
| HV012_RS01790 () | 366674..367003 | + | 330 | WP_000447253.1 | phage tail protein | - |
| HV012_RS01795 () | 367013..367711 | + | 699 | WP_105464699.1 | phage minor tail protein L | - |
| HV012_RS01800 () | 367717..368460 | + | 744 | WP_181588237.1 | C40 family peptidase | - |
| HV012_RS01805 () | 368358..368999 | + | 642 | WP_028127181.1 | tail assembly protein | - |
| HV012_RS01810 () | 369072..369410 | + | 339 | WP_153274582.1 | hypothetical protein | - |
| HV012_RS01815 () | 369477..371426 | + | 1950 | WP_181588844.1 | host specificity protein J | - |
| HV012_RS01820 () | 371423..372955 | + | 1533 | WP_181588797.1 | DUF1983 domain-containing protein | - |
| HV012_RS01825 () | 373023..373622 | + | 600 | WP_001228252.1 | Outer membrane protein X | VF |
| HV012_RS01830 () | 373687..376065 | + | 2379 | WP_021518235.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV012_RS01835 () | 376065..376346 | + | 282 | WP_021518236.1 | hypothetical protein | - |
| HV012_RS01840 () | 376356..377396 | + | 1041 | WP_021518237.1 | tail fiber domain-containing protein | - |
| HV012_RS01845 () | 377439..377726 | + | 288 | WP_021518238.1 | hypothetical protein | - |
| HV012_RS01850 () | 377844..378092 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| HV012_RS01855 () | 378154..379251 | - | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HV012_RS01860 () | 379340..380377 | + | 1038 | WP_181588238.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| HV012_RS01865 () | 380512..380754 | + | 243 | WP_000891391.1 | envelope stress response protein PspG | - |
| HV012_RS01870 () | 380929..381912 | - | 984 | WP_181588239.1 | Quinone oxidoreductase 1 | VF |
| HV012_RS01875 () | 382407..383822 | + | 1416 | WP_002431749.1 | replicative DNA helicase | - |
| HV012_RS01880 () | 383854..384381 | - | 528 | WP_181588240.1 | hypothetical protein | - |
| HV012_RS01885 () | 384427..385047 | - | 621 | WP_181588241.1 | hypothetical protein | - |
| HV012_RS01890 () | 385114..386193 | + | 1080 | WP_181588242.1 | alanine racemase | - |
| HV012_RS01895 () | 386216..386770 | + | 555 | WP_000122232.1 | nicotinamide riboside transporter PnuC | - |
| HV012_RS01900 () | 386770..387780 | + | 1011 | WP_181588243.1 | AAA family ATPase | - |
| HV012_RS01905 () | 387856..389049 | + | 1194 | WP_181588244.1 | aromatic amino acid transaminase | - |
| HV012_RS01910 () | 389234..391978 | + | 2745 | WP_181588798.1 | 2-oxoglutarate dehydrogenase E1 component | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|