MGE detailed information
MGE type: Mobilizable plasmid MGE length: 78367 bp
Accession: NZ_CP056648 Location: 1..78367 Organism: Citrobacter sp. RHBSTW-00229 Replicon: plasmid pRHBSTW-00229_2
Accession: NZ_CP056648 Location: 1..78367 Organism: Citrobacter sp. RHBSTW-00229 Replicon: plasmid pRHBSTW-00229_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV135_RS25400 () | 1..1011 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| HV135_RS25405 () | 1728..2468 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| HV135_RS25410 () | 3117..3383 | - | 267 | WP_024144810.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HV135_RS25415 () | 3932..4629 | - | 698 | Protein_3 | IS1 family transposase IS1R | Transposase |
| HV135_RS25420 () | 4958..7663 | + | 2706 | WP_008786562.1 | HTH-type transcriptional regulator MalT | VF |
| HV135_RS25425 () | 7778..8482 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| HV135_RS25430 () | 8547..8645 | - | 99 | Protein_6 | propanediol dehydratase | - |
| HV135_RS25435 () | 8657..10009 | - | 1353 | Protein_7 | propanediol/glycerol family dehydratase large subunit | - |
| HV135_RS25440 () | 10025..10722 | - | 698 | Protein_8 | IS1 family transposase IS1R | Transposase |
| HV135_RS25445 () | 10826..11047 | - | 222 | WP_001124949.1 | hypothetical protein | - |
| HV135_RS25450 () | 11259..11575 | + | 317 | Protein_10 | DUF4113 domain-containing protein | - |
| HV135_RS25455 () | 11622..12404 | - | 783 | WP_181632480.1 | DsbA family protein | - |
| HV135_RS25460 () | 12774..13754 | - | 981 | WP_016236303.1 | IS5 family transposase ISKpn26 | Transposase |
| HV135_RS25465 () | 13848..14648 | - | 801 | WP_001515712.1 | hypothetical protein | - |
| HV135_RS25470 () | 15406..15891 | + | 486 | Protein_14 | plasmid transfer protein | - |
| HV135_RS25475 () | 15888..16205 | + | 318 | Protein_15 | hypothetical protein | - |
| HV135_RS25480 () | 16354..16575 | - | 222 | Protein_16 | IS5/IS1182 family transposase | - |
| HV135_RS25485 () | 16629..17323 | + | 695 | WP_085949432.1 | IS1 family transposase IS1N | Transposase |
| HV135_RS25490 () | 17504..18526 | - | 1023 | WP_000361404.1 | helicase UvrD | - |
| HV135_RS25495 () | 18511..20073 | - | 1563 | WP_004206609.1 | AAA family ATPase | - |
| HV135_RS25500 () | 20147..20563 | - | 417 | WP_016236302.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HV135_RS25505 () | 20560..20790 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HV135_RS25510 () | 20747..21208 | + | 462 | WP_170989135.1 | hypothetical protein | - |
| HV135_RS25515 () | 21352..21702 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| HV135_RS25520 () | 21753..22496 | + | 744 | WP_004098973.1 | hypothetical protein | - |
| HV135_RS25525 () | 22493..23269 | + | 777 | WP_023302478.1 | site-specific integrase | - |
| HV135_RS25530 () | 23327..23584 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| HV135_RS25535 () | 23837..24957 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| HV135_RS25540 () | 25449..26656 | + | 1208 | WP_088765899.1 | IS3 family transposase ISEcl1 | Transposase |
| HV135_RS25545 () | 27037..27734 | + | 698 | Protein_29 | IS1 family transposase IS1R | Transposase |
| HV135_RS25550 () | 27750..27926 | + | 177 | Protein_30 | IS6 family transposase IS15DI | Transposase |
| HV135_RS25555 () | 28253..28753 | + | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| HV135_RS25560 () | 29070..30050 | - | 981 | WP_016236303.1 | IS5 family transposase ISKpn26 | Transposase |
| HV135_RS25565 () | 30328..30609 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| HV135_RS25570 () | 30590..30919 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV135_RS25575 () | 31524..34019 | - | 2496 | Protein_35 | Tn3 family transposase ISEc63 | Transposase |
| HV135_RS25580 () | 34256..34624 | - | 369 | WP_032677090.1 | hypothetical protein | - |
| HV135_RS25585 () | 34700..34891 | - | 192 | WP_001143752.1 | Tn3 family transposase ISEc63 | Transposase |
| HV135_RS25590 () | 35055..35627 | + | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HV135_RS25595 () | 35636..36040 | + | 405 | WP_004118313.1 | arsenic transporter ATPase | - |
| HV135_RS25600 () | 36071..36496 | - | 426 | WP_000065759.1 | glutaredoxin-dependent arsenate reductase | - |
| HV135_RS25605 () | 36509..37798 | - | 1290 | WP_003026002.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HV135_RS25610 () | 37847..39598 | - | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HV135_RS25615 () | 39616..39978 | - | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HV135_RS25620 () | 40026..40379 | - | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HV135_RS25625 () | 40664..41968 | - | 1305 | Protein_45 | diguanylate cyclase | - |
| HV135_RS25630 () | 42018..42722 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV135_RS25635 () | 42987..43277 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| HV135_RS25640 () | 43274..43660 | + | 387 | WP_003100872.1 | DUF86 domain-containing protein | - |
| HV135_RS25645 () | 43897..44253 | + | 357 | WP_003465043.1 | cupin domain-containing protein | - |
| HV135_RS25650 () | 44508..44834 | + | 327 | WP_003100858.1 | hypothetical protein | - |
| HV135_RS25655 () | 44831..45331 | + | 501 | WP_003100856.1 | hypothetical protein | - |
| HV135_RS25660 () | 45328..45699 | + | 372 | WP_003100853.1 | hypothetical protein | - |
| HV135_RS25665 () | 45693..46250 | + | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HV135_RS25670 () | 46769..47177 | - | 409 | Protein_54 | IS3 family transposase | - |
| HV135_RS25675 () | 47181..47429 | + | 249 | Protein_55 | IS200/IS605 family transposase | - |
| HV135_RS25680 () | 47509..49770 | - | 2262 | WP_080892730.1 | ABC transporter permease | - |
| HV135_RS25685 () | 49763..50017 | - | 255 | Protein_57 | hypothetical protein | - |
| HV135_RS25690 () | 50036..50512 | - | 477 | Protein_58 | IS3 family transposase ISEhe3 | Transposase |
| HV135_RS25695 () | 50593..52101 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV135_RS25700 () | 52774..53453 | - | 680 | Protein_60 | IS3 family transposase | - |
| HV135_RS25705 () | 53514..54209 | - | 696 | WP_181632481.1 | hypothetical protein | VF |
| HV135_RS25710 () | 54409..55106 | + | 698 | Protein_62 | IS1 family transposase | - |
| HV135_RS25715 () | 55388..55609 | - | 222 | Protein_63 | FipA | - |
| HV135_RS25720 () | 55609..56610 | - | 1002 | Protein_64 | ATP-binding domain-containing protein | - |
| HV135_RS25725 () | 56627..57324 | - | 698 | Protein_65 | IS1 family transposase | - |
| HV135_RS25730 () | 57408..58007 | + | 600 | Protein_66 | Tn3 family transposase ISEc63 | Transposase |
| HV135_RS25735 () | 58059..58795 | + | 737 | Protein_67 | IS3 family transposase IS629 | Transposase |
| HV135_RS25740 () | 59468..60976 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV135_RS25745 () | 61066..61539 | + | 474 | Protein_69 | IS3 family transposase ISEc25 | Transposase |
| HV135_RS25750 () | 61583..62605 | + | 1023 | Protein_70 | Tn3 family transposase ISEc63 | Transposase |
| HV135_RS25755 () | 62829..64601 | - | 1773 | WP_001262766.1 | DUF262 domain-containing protein | - |
| HV135_RS25760 () | 64885..65286 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HV135_RS25765 () | 65219..65476 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HV135_RS25770 () | 65569..66222 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HV135_RS25775 () | 66948..67652 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV135_RS25780 () | 67718..68198 | + | 481 | Protein_76 | IS1 family transposase | - |
| HV135_RS25785 () | 68214..68516 | + | 303 | Protein_77 | replication initiation protein | - |
| HV135_RS25790 () | 69344..70029 | - | 686 | Protein_78 | IS1 family transposase | - |
| HV135_RS25795 () | 70181..71668 | - | 1488 | WP_024191381.1 | group II intron reverse transcriptase/maturase | - |
| HV135_RS25800 () | 72069..72494 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV135_RS25805 () | 72494..73765 | + | 1272 | WP_097293759.1 | Y-family DNA polymerase | - |
| HV135_RS25810 () | 73844..74095 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| HV135_RS25815 () | 74149..74454 | + | 306 | WP_016156495.1 | hypothetical protein | - |
| HV135_RS25820 () | 75479..76450 | - | 972 | WP_016243880.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV135_RS25825 () | 76450..77616 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|