MGE detailed information
MGE type: Prophage MGE length: 100919 bp
Accession: NZ_CP056592 Location: 4198279..4299197 Organism: Citrobacter freundii strain RHBSTW-00350 Replicon: chromosome
Accession: NZ_CP056592 Location: 4198279..4299197 Organism: Citrobacter freundii strain RHBSTW-00350 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV171_RS20250 () | 4194370..4195845 | + | 1476 | WP_003024535.1 | TrkH family potassium uptake protein | - |
| HV171_RS20255 () | 4195862..4197274 | - | 1413 | WP_003024538.1 | cell division protein FtsP | - |
| HV171_RS20260 () | 4197346..4198083 | - | 738 | WP_003024540.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| HV171_RS20265 () | 4198279..4200537 | - | 2259 | WP_003024543.1 | DNA topoisomerase IV subunit A | - |
| HV171_RS20270 () | 4200656..4201054 | - | 399 | WP_003024544.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| HV171_RS20275 () | 4201205..4201864 | + | 660 | WP_003024547.1 | hypothetical protein | VF |
| HV171_RS20280 () | 4201861..4203210 | + | 1350 | WP_003846328.1 | two-component system sensor histidine kinase QseC | - |
| HV171_RS20285 () | 4203320..4203901 | + | 582 | WP_071696292.1 | NAD(P)H-dependent oxidoreductase | - |
| HV171_RS20290 () | 4203932..4204246 | + | 315 | WP_003024557.1 | antibiotic biosynthesis monooxygenase | - |
| HV171_RS20295 () | 4204354..4206246 | - | 1893 | WP_003024571.1 | DNA topoisomerase IV subunit B | - |
| HV171_RS20300 () | 4206275..4206856 | - | 582 | WP_003024575.1 | esterase YqiA | - |
| HV171_RS20305 () | 4206856..4207683 | - | 828 | WP_003838143.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| HV171_RS20310 () | 4207708..4208130 | - | 423 | WP_003024582.1 | DUF1249 family protein | - |
| HV171_RS20315 () | 4208127..4208759 | - | 633 | WP_003024585.1 | ADP-ribose diphosphatase | - |
| HV171_RS20320 () | 4208959..4210437 | + | 1479 | WP_085951568.1 | outer membrane channel protein TolC | - |
| HV171_RS20325 () | 4210595..4211272 | + | 678 | WP_003024591.1 | DUF1190 family protein | - |
| HV171_RS20330 () | 4211278..4212438 | + | 1161 | WP_003024594.1 | glutathionylspermidine synthase family protein | - |
| HV171_RS20335 () | 4212524..4213312 | - | 789 | WP_071696293.1 | 4,5-DOPA dioxygenase extradiol | - |
| HV171_RS20340 () | 4213460..4214233 | + | 774 | WP_071696294.1 | zinc transporter ZupT | - |
| HV171_RS20345 () | 4214873..4216669 | + | 1797 | WP_071696295.1 | aryl-sulfate sulfotransferase | - |
| HV171_RS20350 () | 4216693..4217361 | + | 669 | WP_071696296.1 | thiol:disulfide interchange protein DsbA/DsbL | - |
| HV171_RS20355 () | 4217376..4218047 | + | 672 | WP_071696297.1 | protein-disulfide oxidoreductase DsbI | - |
| HV171_RS20360 () | 4218474..4219037 | + | 564 | WP_049015230.1 | hypothetical protein | VF |
| HV171_RS20365 () | 4219105..4221552 | + | 2448 | WP_071696298.1 | hypothetical protein | VF |
| HV171_RS20370 () | 4221566..4222225 | + | 660 | WP_181562409.1 | hypothetical protein | VF |
| HV171_RS20375 () | 4222309..4223340 | + | 1032 | WP_046092923.1 | IS630 family transposase ISEc33 | Transposase |
| HV171_RS20380 () | 4223449..4224522 | + | 1074 | WP_071684667.1 | type 1 fimbrial protein | - |
| HV171_RS20385 () | 4224578..4225231 | - | 654 | WP_003828424.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| HV171_RS20390 () | 4225621..4225917 | + | 297 | WP_003024618.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| HV171_RS20395 () | 4225950..4226156 | - | 207 | WP_019077704.1 | cell surface composition regulator GlgS | - |
| HV171_RS20400 () | 4226417..4227046 | + | 630 | WP_071696300.1 | DUF1449 family protein | - |
| HV171_RS20405 () | 4227071..4228738 | + | 1668 | WP_071696301.1 | flotillin family protein | - |
| HV171_RS20410 () | 4228831..4230264 | - | 1434 | WP_003838125.1 | hypothetical protein | VF |
| HV171_RS20415 () | 4230324..4233164 | - | 2841 | WP_003846303.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| HV171_RS20420 () | 4233290..4234591 | - | 1302 | WP_071696302.1 | inorganic triphosphatase | - |
| HV171_RS20425 () | 4234833..4235453 | + | 621 | WP_003024650.1 | SH3 domain-containing protein | - |
| HV171_RS20430 () | 4235515..4236756 | + | 1242 | WP_003024653.1 | multifunctional CCA addition/repair protein | - |
| HV171_RS20435 () | 4236818..4237636 | - | 819 | WP_071696303.1 | undecaprenyl-diphosphate phosphatase | - |
| HV171_RS20440 () | 4237723..4238091 | - | 369 | WP_003838117.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| HV171_RS20445 () | 4238198..4238815 | + | 618 | WP_003024662.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| HV171_RS20450 () | 4238847..4239788 | - | 942 | WP_032950138.1 | LysR family transcriptional regulator | - |
| HV171_RS20455 () | 4240001..4240909 | + | 909 | WP_003846290.1 | L(+)-tartrate dehydratase subunit alpha | - |
| HV171_RS20460 () | 4240906..4241511 | + | 606 | WP_016150996.1 | L(+)-tartrate dehydratase subunit beta | - |
| HV171_RS20465 () | 4241559..4243022 | + | 1464 | WP_071696304.1 | anion permease | - |
| HV171_RS20470 () | 4243228..4243968 | + | 741 | WP_048218611.1 | urease accessory protein UreD | - |
| HV171_RS20475 () | 4243979..4244281 | + | 303 | WP_003024678.1 | hypothetical protein | VF |
| HV171_RS20480 () | 4244291..4244611 | + | 321 | WP_071696305.1 | hypothetical protein | VF |
| HV171_RS20485 () | 4244604..4246307 | + | 1704 | WP_071696306.1 | hypothetical protein | VF |
| HV171_RS20490 () | 4246316..4246774 | + | 459 | WP_003024684.1 | urease accessory protein UreE | - |
| HV171_RS20495 () | 4246774..4247445 | + | 672 | WP_071696307.1 | urease accessory protein UreF | - |
| HV171_RS20500 () | 4247455..4248072 | + | 618 | WP_003024692.1 | hypothetical protein | VF |
| HV171_RS20505 () | 4248110..4249123 | - | 1014 | WP_003024694.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| HV171_RS20510 () | 4249360..4249575 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| HV171_RS20515 () | 4249813..4251558 | + | 1746 | WP_003024697.1 | DNA primase | - |
| HV171_RS20520 () | 4251802..4253649 | + | 1848 | WP_003024699.1 | RNA polymerase sigma factor RpoD | - |
| HV171_RS20525 () | 4253811..4254860 | + | 1050 | WP_071696308.1 | YncE family protein | - |
| HV171_RS20530 () | 4254871..4256868 | + | 1998 | WP_071696309.1 | TonB-dependent receptor | - |
| HV171_RS20535 () | 4256899..4257405 | - | 507 | WP_071696310.1 | G/U mismatch-specific DNA glycosylase | - |
| HV171_RS20545 () | 4257709..4258542 | - | 834 | WP_048215515.1 | DUF4942 domain-containing protein | - |
| HV171_RS20550 () | 4258658..4258999 | - | 342 | WP_048215514.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV171_RS20555 () | 4259020..4259337 | - | 318 | WP_046495841.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV171_RS20560 () | 4259356..4259577 | - | 222 | WP_000691995.1 | DUF987 domain-containing protein | - |
| HV171_RS20565 () | 4259586..4260062 | - | 477 | WP_046495838.1 | RadC family protein | - |
| HV171_RS20570 () | 4260078..4260536 | - | 459 | WP_046495834.1 | antirestriction protein | - |
| HV171_RS20575 () | 4260615..4260851 | - | 237 | WP_046495830.1 | DUF905 domain-containing protein | - |
| HV171_RS20580 () | 4260929..4261339 | - | 411 | WP_046495825.1 | hypothetical protein | - |
| HV171_RS20585 () | 4261428..4262042 | - | 615 | WP_046495819.1 | hypothetical protein | - |
| HV171_RS20590 () | 4262039..4262743 | - | 705 | WP_046495813.1 | WYL domain-containing protein | - |
| HV171_RS20595 () | 4262945..4263778 | - | 834 | WP_103856759.1 | DUF945 domain-containing protein | - |
| HV171_RS20600 () | 4263876..4264739 | - | 864 | WP_046495804.1 | GTPase family protein | - |
| HV171_RS20605 () | 4265088..4268366 | + | 3279 | WP_046495798.1 | DEAD/DEAH box helicase family protein | - |
| HV171_RS20610 () | 4268363..4269052 | + | 690 | WP_071697120.1 | DUF4391 domain-containing protein | - |
| HV171_RS20615 () | 4269087..4270967 | + | 1881 | WP_071697119.1 | ATP-dependent endonuclease | - |
| HV171_RS20620 () | 4270970..4272379 | + | 1410 | WP_046495790.1 | DUF2130 domain-containing protein | - |
| HV171_RS20625 () | 4272439..4273746 | + | 1308 | WP_081368699.1 | site-specific DNA-methyltransferase | - |
| HV171_RS20630 () | 4273908..4274525 | - | 618 | Protein_4034 | IS21 family transposase ISSen3 | Transposase |
| HV171_RS20635 () | 4274742..4275422 | - | 681 | WP_071697117.1 | inovirus Gp2 family protein | - |
| HV171_RS20640 () | 4275699..4277213 | - | 1515 | WP_071697116.1 | DUF3987 domain-containing protein | - |
| HV171_RS20645 () | 4277273..4277509 | - | 237 | WP_048218657.1 | AlpA family phage regulatory protein | - |
| HV171_RS20650 () | 4277616..4278689 | - | 1074 | WP_049015582.1 | hypothetical protein | - |
| HV171_RS20655 () | 4278913..4279944 | - | 1032 | WP_046092923.1 | IS630 family transposase ISEc33 | Transposase |
| HV171_RS20660 () | 4280078..4280236 | + | 159 | WP_102016203.1 | hypothetical protein | - |
| HV171_RS20665 () | 4280233..4280847 | - | 615 | WP_174330013.1 | Fic family protein | - |
| HV171_RS20670 () | 4280852..4282168 | - | 1317 | WP_061548511.1 | hypothetical protein ; Integrase | Integrase |
| HV171_RS20675 () | 4282365..4282763 | - | 399 | Protein_4043 | DUF932 domain-containing protein | - |
| HV171_RS20680 () | 4282855..4283718 | - | 864 | WP_061548510.1 | GTPase family protein | - |
| HV171_RS20685 () | 4284314..4284562 | + | 249 | Protein_4045 | IS3 family transposase ISEhe3 | Transposase |
| HV171_RS20690 () | 4284572..4285723 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| HV171_RS20695 () | 4285787..4286216 | + | 430 | Protein_4047 | IS3 family transposase | - |
| HV171_RS20700 () | 4286889..4288397 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV171_RS20705 () | 4288478..4288657 | + | 180 | Protein_4049 | DDE-type integrase/transposase/recombinase | - |
| HV171_RS20710 () | 4288938..4290020 | + | 1083 | WP_069219573.1 | IS110 family transposase ISEc21 | Transposase |
| HV171_RS20715 () | 4290341..4291411 | + | 1071 | WP_001180633.1 | IS110 family transposase ISLxx2 | Transposase |
| HV171_RS20720 () | 4291419..4291604 | + | 186 | Protein_4052 | IS3 family transposase ISEam1 | Transposase |
| HV171_RS20725 () | 4291765..4292916 | + | 1152 | WP_001000602.1 | Na+/H+ antiporter NhaA | - |
| HV171_RS20730 () | 4293109..4293813 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV171_RS20735 () | 4293853..4294098 | - | 246 | Protein_4055 | DUF523 domain-containing protein | - |
| HV171_RS20740 () | 4294201..4294611 | - | 411 | WP_071697250.1 | hydroxyisourate hydrolase | - |
| HV171_RS20745 () | 4294711..4295436 | - | 726 | WP_181562410.1 | IS607 family transposase ISAfe11 | Transposase |
| HV171_RS20750 () | 4295554..4295883 | + | 330 | Protein_4058 | lipocalin family protein | - |
| HV171_RS20755 () | 4296188..4297210 | + | 1023 | WP_061548413.1 | IS110 family transposase ISSm1 | Transposase |
| HV171_RS20760 () | 4297606..4298607 | + | 1002 | WP_061548412.1 | NAD(P)H-quinone oxidoreductase | - |
| HV171_RS20765 () | 4298820..4299502 | - | 683 | Protein_4061 | IS1 family transposase IS1R | Transposase |
| HV171_RS20770 () | 4299697..4300714 | - | 1018 | Protein_4062 | IS5-like element IS5 family transposase | - |
| HV171_RS20775 () | 4300713..4301042 | + | 330 | WP_024196074.1 | acid-activated periplasmic chaperone HdeB | - |
| HV171_RS20780 () | 4301094..4301897 | - | 804 | WP_032669189.1 | aquaporin | - |
| HV171_RS20785 () | 4301951..4303762 | - | 1812 | WP_181562411.1 | diol dehydratase reactivase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|