MGE detailed information
MGE type: Conjugative plasmid MGE length: 155385 bp
Accession: NZ_CP056252 Location: 1..155385 Organism: Citrobacter sp. RHBSTW-00903 Replicon: plasmid pRHBSTW-00903_2
Accession: NZ_CP056252 Location: 1..155385 Organism: Citrobacter sp. RHBSTW-00903 Replicon: plasmid pRHBSTW-00903_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV320_RS26130 () | 1..942 | + | 942 | WP_165690017.1 | replication initiator protein RepA | - |
| HV320_RS26135 () | 2099..2548 | - | 450 | Protein_2 | IS1 family transposase IS1X2 | Transposase |
| HV320_RS26140 () | 2592..3179 | - | 588 | Protein_3 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| HV320_RS26145 () | 3443..3796 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HV320_RS26150 () | 3844..4206 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HV320_RS26155 () | 4224..5975 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HV320_RS26160 () | 6024..7313 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HV320_RS26165 () | 7326..7751 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| HV320_RS26170 () | 7782..8186 | - | 405 | WP_004118313.1 | arsenic transporter ATPase | - |
| HV320_RS26175 () | 8195..8767 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HV320_RS26180 () | 8931..11939 | + | 3009 | WP_012817690.1 | Tn3 family transposase ISEc63 | Transposase |
| HV320_RS26185 () | 11973..12725 | + | 753 | Protein_12 | zinc-binding alcohol dehydrogenase family protein | - |
| HV320_RS26190 () | 12799..13230 | + | 432 | WP_004357630.1 | heme-binding protein | - |
| HV320_RS26195 () | 13293..13583 | + | 291 | WP_011191344.1 | DUF1330 domain-containing protein | - |
| HV320_RS26200 () | 13735..14205 | + | 471 | WP_011191345.1 | hypothetical protein | - |
| HV320_RS26205 () | 14209..14721 | + | 513 | WP_004357637.1 | DM13 domain-containing protein | - |
| HV320_RS26210 () | 14709..15980 | + | 1272 | WP_103827477.1 | MFS transporter | - |
| HV320_RS26215 () | 16011..16412 | - | 402 | WP_004099044.1 | hypothetical protein | - |
| HV320_RS26220 () | 16519..16968 | - | 450 | WP_004099042.1 | hypothetical protein | - |
| HV320_RS26225 () | 17056..17628 | - | 573 | WP_047722653.1 | hypothetical protein | - |
| HV320_RS26230 () | 17720..18688 | - | 969 | WP_045269763.1 | magnesium and cobalt transport protein CorA | - |
| HV320_RS26235 () | 18685..19389 | - | 705 | WP_004099038.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| HV320_RS26240 () | 19522..20061 | - | 540 | WP_004099036.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| HV320_RS26245 () | 20063..20506 | - | 444 | WP_004099035.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| HV320_RS26250 () | 20652..21527 | - | 876 | WP_011191349.1 | LysR family transcriptional regulator | - |
| HV320_RS26255 () | 21756..22988 | + | 1233 | WP_045269764.1 | bifunctional alpha/beta hydrolase/OsmC family protein | - |
| HV320_RS26260 () | 22991..23584 | + | 594 | WP_025760400.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| HV320_RS26265 () | 23587..24609 | + | 1023 | WP_171845808.1 | Quinone oxidoreductase 1 | VF |
| HV320_RS26270 () | 25006..25500 | - | 495 | WP_004099028.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| HV320_RS26275 () | 25817..25999 | - | 183 | WP_004357657.1 | hypothetical protein | - |
| HV320_RS26280 () | 26058..26546 | - | 489 | WP_004099027.1 | DUF417 family protein | - |
| HV320_RS26285 () | 26817..27203 | + | 387 | WP_004099026.1 | hypothetical protein | - |
| HV320_RS26290 () | 27242..28201 | - | 960 | WP_004099025.1 | YeeE/YedE family protein | - |
| HV320_RS26295 () | 28228..28761 | - | 534 | WP_004357616.1 | MarR family transcriptional regulator | - |
| HV320_RS26300 () | 29018..29914 | + | 897 | WP_011191354.1 | LysR family transcriptional regulator | - |
| HV320_RS26305 () | 29911..30147 | - | 237 | WP_026227538.1 | DUF2274 domain-containing protein | - |
| HV320_RS26310 () | 30150..31370 | - | 1221 | WP_011191355.1 | Type IV secretion system protein virB10 | VF |
| HV320_RS26315 () | 31367..32416 | - | 1050 | WP_011191356.1 | P-type conjugative transfer protein TrbG | - |
| HV320_RS26320 () | 32413..32733 | - | 321 | Protein_39 | conjugal transfer protein TrbF | - |
| HV320_RS26325 () | 33011..34015 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| HV320_RS26330 () | 34094..37060 | - | 2967 | WP_032640605.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| HV320_RS26335 () | 37219..37509 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| HV320_RS26340 () | 37506..37907 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| HV320_RS26345 () | 37897..38253 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| HV320_RS26350 () | 38508..38822 | + | 315 | WP_000091613.1 | hypothetical protein | - |
| HV320_RS26355 () | 38995..39528 | - | 534 | WP_000792636.1 | Phospholipase D | VF |
| HV320_RS26360 () | 39528..40523 | - | 996 | WP_012561144.1 | Type IV secretion system protein VirB11 | VF |
| HV320_RS26365 () | 40565..41725 | - | 1161 | WP_012561145.1 | Protein virB10 | VF |
| HV320_RS26370 () | 41725..42150 | - | 426 | Protein_49 | Protein virB9 | VF |
| HV320_RS26375 () | 42183..42638 | - | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| HV320_RS26380 () | 42710..43105 | + | 396 | WP_001294653.1 | mercuric ion transporter MerT | - |
| HV320_RS26385 () | 43121..43396 | + | 276 | WP_000732275.1 | mercury resistance system periplasmic binding protein MerP | - |
| HV320_RS26390 () | 43424..43849 | + | 426 | WP_000522996.1 | organomercurial transporter MerC | - |
| HV320_RS26395 () | 43888..45573 | + | 1686 | WP_000209296.1 | mercury(II) reductase | - |
| HV320_RS26400 () | 45591..45956 | + | 366 | WP_001277466.1 | mercury resistance co-regulator MerD | - |
| HV320_RS26405 () | 45953..46189 | + | 237 | WP_001087807.1 | broad-spectrum mercury transporter MerE | - |
| HV320_RS26410 () | 46255..46467 | + | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| HV320_RS26415 () | 46597..47154 | + | 558 | WP_001162010.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| HV320_RS26420 () | 47239..47943 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV320_RS26425 () | 48270..48770 | + | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| HV320_RS26430 () | 49087..50067 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| HV320_RS26435 () | 50509..51180 | - | 672 | WP_047721798.1 | Ribulose-phosphate 3-epimerase | VF |
| HV320_RS26440 () | 51177..51620 | - | 444 | WP_040219247.1 | ribose 5-phosphate isomerase B | - |
| HV320_RS26445 () | 51698..53287 | - | 1590 | WP_040219244.1 | PTS transporter subunit EIIC | - |
| HV320_RS26450 () | 53680..54570 | + | 891 | WP_040219243.1 | SIS domain-containing protein | - |
| HV320_RS26455 () | 54571..54804 | + | 234 | Protein_66 | hypothetical protein | - |
| HV320_RS26460 () | 55039..55323 | + | 285 | WP_077257426.1 | hypothetical protein | - |
| HV320_RS26465 () | 55397..55885 | - | 489 | WP_058672086.1 | hypothetical protein | - |
| HV320_RS26470 () | 56142..57257 | + | 1116 | WP_058672087.1 | DNA-binding protein | - |
| HV320_RS26475 () | 57250..58104 | + | 855 | WP_040219240.1 | 3'-5' exonuclease | - |
| HV320_RS26480 () | 58157..58552 | + | 396 | WP_040219261.1 | hypothetical protein | - |
| HV320_RS26485 () | 58549..59160 | + | 612 | WP_015493086.1 | DUF2913 family protein | - |
| HV320_RS26490 () | 59157..60107 | - | 951 | WP_040219234.1 | Recombination-promoting nuclease RpnA | VF |
| HV320_RS26495 () | 60477..61181 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV320_RS26500 () | 61508..62008 | + | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| HV320_RS26505 () | 62127..63355 | + | 1229 | WP_148116659.1 | IS3 family transposase ISEc27 | Transposase |
| HV320_RS26510 () | 63661..64641 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| HV320_RS26515 () | 64919..65200 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| HV320_RS26520 () | 65181..65510 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV320_RS26525 () | 65929..66882 | - | 954 | WP_022652300.1 | IS110 family transposase IS4321R | Transposase |
| HV320_RS26530 () | 67079..67474 | - | 396 | Protein_81 | cytochrome C | - |
| HV320_RS26535 () | 67503..68213 | - | 711 | WP_022652302.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HV320_RS26540 () | 68215..69420 | - | 1206 | WP_022652303.1 | ABC transporter permease | - |
| HV320_RS26545 () | 69417..70568 | - | 1152 | WP_022652304.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HV320_RS26550 () | 70565..71173 | - | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| HV320_RS26555 () | 71361..72314 | + | 954 | WP_022652300.1 | IS110 family transposase IS4321R | Transposase |
| HV320_RS26560 () | 72905..73414 | + | 510 | WP_050483874.1 | sigma-70 family RNA polymerase sigma factor | - |
| HV320_RS26565 () | 73571..74572 | + | 1002 | Protein_88 | permease | - |
| HV320_RS26570 () | 74586..74816 | + | 231 | WP_021314637.1 | thioredoxin family protein | - |
| HV320_RS26575 () | 75094..75297 | - | 204 | WP_021314636.1 | hypothetical protein | - |
| HV320_RS26580 () | 75379..76206 | - | 828 | WP_032430841.1 | universal stress protein | - |
| HV320_RS26585 () | 76224..77702 | - | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
| HV320_RS26590 () | 78209..79231 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| HV320_RS26595 () | 79523..79830 | - | 308 | Protein_94 | IS1 family transposase | - |
| HV320_RS26600 () | 80307..81047 | + | 741 | WP_022652310.1 | site-specific integrase | - |
| HV320_RS26605 () | 81373..82362 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| HV320_RS26610 () | 83218..83487 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV320_RS26615 () | 83491..84021 | + | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV320_RS26620 () | 84153..85046 | + | 894 | WP_176311857.1 | IS5 family transposase IS5D | Transposase |
| HV320_RS26625 () | 85187..85663 | - | 477 | Protein_100 | IS3 family transposase ISEhe3 | Transposase |
| HV320_RS26630 () | 85744..87252 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV320_RS26635 () | 87925..88354 | - | 430 | Protein_102 | IS3 family transposase | - |
| HV320_RS26640 () | 88418..89569 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| HV320_RS26645 () | 89601..90941 | - | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| HV320_RS26650 () | 91172..91414 | - | 243 | Protein_105 | IS3 family transposase ISEhe3 | Transposase |
| HV320_RS26655 () | 91785..92951 | + | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| HV320_RS26660 () | 92951..93916 | + | 966 | WP_022652318.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV320_RS26665 () | 94649..95691 | - | 1043 | Protein_108 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HV320_RS26670 () | 95945..98083 | + | 2139 | WP_022652236.1 | hypothetical protein | - |
| HV320_RS26675 () | 98417..99820 | + | 1404 | WP_072200700.1 | DNA cytosine methyltransferase | - |
| HV320_RS26680 () | 99854..101068 | - | 1215 | WP_022652238.1 | type II site-specific deoxyribonuclease | - |
| HV320_RS26685 () | 101217..103343 | - | 2127 | WP_022652239.1 | tyrosine-type recombinase/integrase | - |
| HV320_RS26690 () | 103327..104331 | - | 1005 | Protein_113 | tyrosine-type recombinase/integrase | - |
| HV320_RS26695 () | 104405..104632 | - | 228 | Protein_114 | DNA polymerase V subunit UmuC | - |
| HV320_RS26700 () | 104632..105054 | - | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV320_RS26705 () | 105234..105905 | - | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| HV320_RS26710 () | 106265..106942 | + | 678 | WP_022652244.1 | DNA methylase | - |
| HV320_RS26715 () | 106942..107163 | + | 222 | WP_022652245.1 | hypothetical protein | - |
| HV320_RS26720 () | 107174..107593 | + | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| HV320_RS26725 () | 107647..108426 | + | 780 | WP_032430832.1 | hypothetical protein | - |
| HV320_RS26730 () | 108493..108696 | - | 204 | WP_042889371.1 | hypothetical protein | - |
| HV320_RS26735 () | 108833..109339 | + | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| HV320_RS26740 () | 109382..109573 | + | 192 | WP_022652248.1 | hypothetical protein | - |
| HV320_RS26745 () | 109765..110019 | + | 255 | WP_072200699.1 | DNA polymerase III subunit theta | - |
| HV320_RS26750 () | 110054..110371 | + | 318 | WP_032430831.1 | hypothetical protein | - |
| HV320_RS26755 () | 110494..110715 | - | 222 | WP_015062665.1 | hypothetical protein | - |
| HV320_RS26760 () | 111046..111600 | + | 555 | WP_020842505.1 | single-stranded DNA-binding protein | - |
| HV320_RS26765 () | 111653..111895 | + | 243 | WP_032430848.1 | DUF905 domain-containing protein | - |
| HV320_RS26770 () | 111966..113999 | + | 2034 | Protein_129 | ParB/RepB/Spo0J family partition protein | - |
| HV320_RS26775 () | 114040..114474 | + | 435 | WP_086538015.1 | conjugation system SOS inhibitor PsiB | - |
| HV320_RS26780 () | 114471..115199 | + | 729 | WP_032430829.1 | plasmid SOS inhibition protein A | - |
| HV320_RS26785 () | 115196..115549 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| HV320_RS26790 () | 115903..116277 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| HV320_RS26795 () | 117003..117407 | + | 405 | WP_032430828.1 | hypothetical protein | - |
| HV320_RS26800 () | 117464..117811 | + | 348 | WP_032430827.1 | hypothetical protein | - |
| HV320_RS26805 () | 117906..118052 | + | 147 | WP_001159045.1 | hypothetical protein | - |
| HV320_RS26810 () | 118099..118932 | + | 834 | WP_032430826.1 | type I restriction-modification system subunit M | - |
| HV320_RS26815 () | 119579..120109 | + | 531 | WP_032430825.1 | antirestriction protein | - |
| HV320_RS26820 () | 120120..120575 | - | 456 | WP_032430824.1 | hypothetical protein | VF |
| HV320_RS26825 () | 121044..121427 | + | 384 | WP_015062650.1 | relaxosome protein TraM | - |
| HV320_RS26830 () | 121724..122173 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| HV320_RS26835 () | 122379..122612 | + | 234 | WP_032430823.1 | TraY domain-containing protein | - |
| HV320_RS26840 () | 122730..123089 | + | 360 | WP_032430822.1 | type IV conjugative transfer system pilin TraA | - |
| HV320_RS26845 () | 123091..123396 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| HV320_RS26850 () | 123416..123979 | + | 564 | WP_032430821.1 | type IV conjugative transfer system protein TraE | - |
| HV320_RS26855 () | 123969..124709 | + | 741 | WP_032430820.1 | type-F conjugative transfer system secretin TraK | - |
| HV320_RS26860 () | 124696..126057 | + | 1362 | WP_032430819.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HV320_RS26865 () | 126167..126386 | + | 220 | Protein_148 | TraR/DksA C4-type zinc finger protein | - |
| HV320_RS26870 () | 126399..126851 | + | 453 | WP_032430818.1 | hypothetical protein | - |
| HV320_RS26875 () | 126869..127468 | + | 600 | WP_047715683.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HV320_RS26880 () | 127479..130070 | + | 2592 | WP_032430816.1 | type IV secretion system protein TraC | - |
| HV320_RS26885 () | 130067..130531 | + | 465 | WP_032430815.1 | type-F conjugative transfer system protein TrbI | - |
| HV320_RS26890 () | 130531..131166 | + | 636 | WP_032430814.1 | type-F conjugative transfer system protein TraW | - |
| HV320_RS26895 () | 131163..132158 | + | 996 | WP_032430813.1 | conjugal transfer pilus assembly protein TraU | - |
| HV320_RS26900 () | 132169..132537 | + | 369 | WP_032430812.1 | hypothetical protein | - |
| HV320_RS26905 () | 132534..133148 | + | 615 | WP_032430811.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV320_RS26910 () | 133145..133660 | + | 516 | Protein_157 | conjugal transfer protein TraN | - |
| HV320_RS26915 () | 133902..134285 | + | 384 | WP_001201739.1 | IS66 family insertion sequence hypothetical protein | - |
| HV320_RS26920 () | 134282..134629 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HV320_RS26925 () | 134679..136214 | + | 1536 | WP_016239903.1 | IS66 family transposase ISSgsp1 | Transposase |
| HV320_RS26930 () | 136313..137443 | + | 1131 | Protein_161 | conjugal transfer protein TraN | - |
| HV320_RS26935 () | 137440..138219 | + | 780 | WP_071446640.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HV320_RS26940 () | 138245..138856 | + | 612 | WP_032430808.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HV320_RS26945 () | 138856..140217 | + | 1362 | WP_032430807.1 | F-type conjugal transfer protein TraH | - |
| HV320_RS26950 () | 140219..143116 | + | 2898 | WP_047715678.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HV320_RS26955 () | 143128..143688 | + | 561 | WP_047715676.1 | hypothetical protein | - |
| HV320_RS26960 () | 143864..144601 | + | 738 | WP_047715675.1 | complement resistance protein TraT | - |
| HV320_RS26965 () | 144752..146986 | + | 2235 | WP_047715674.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV320_RS26970 () | 146986..152289 | + | 5304 | WP_047715673.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV320_RS26975 () | 152308..152874 | + | 567 | WP_047715672.1 | DUF2726 domain-containing protein | - |
| HV320_RS26980 () | 152871..153602 | + | 732 | WP_071446724.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HV320_RS26985 () | 153644..153997 | + | 354 | WP_047715670.1 | hypothetical protein | - |
| HV320_RS26990 () | 154146..154709 | + | 564 | WP_047715669.1 | Phospholipase D | VF |
| HV320_RS26995 () | 154841..155083 | + | 243 | WP_000078032.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|