MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP056114 Location: 3927115..3975270 Organism: Escherichia coli strain Ec394-330266 Replicon: chromosome
Accession: NZ_CP056114 Location: 3927115..3975270 Organism: Escherichia coli strain Ec394-330266 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWD38_RS18850 (3923380) | 3923380..3924483 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HWD38_RS18855 (3924495) | 3924495..3925748 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HWD38_RS18865 (3925953) | 3925953..3926156 | - | 204 | Protein_3690 | integrase | - |
| HWD38_RS18870 (3926302) | 3926302..3926772 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| HWD38_RS18875 (3926750) | 3926750..3926908 | - | 159 | WP_071550417.1 | ash family protein | - |
| HWD38_RS18880 (3927115) | 3927115..3928362 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| HWD38_RS18885 (3928352) | 3928352..3929989 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| HWD38_RS18890 (3929983) | 3929983..3933081 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| HWD38_RS18895 (3933365) | 3933365..3934147 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| HWD38_RS18900 (3934134) | 3934134..3935054 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| HWD38_RS18905 (3935219) | 3935219..3935995 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| HWD38_RS18910 (3936203) | 3936203..3936538 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| HWD38_RS18915 (3936765) | 3936765..3936923 | - | 159 | Protein_3700 | integrase | - |
| HWD38_RS18920 (3936972) | 3936972..3937157 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| HWD38_RS18925 (3937372) | 3937372..3937986 | + | 615 | WP_001019923.1 | YagU family protein | - |
| HWD38_RS18930 (3938057) | 3938057..3938223 | + | 167 | Protein_3703 | tail fiber assembly protein | - |
| HWD38_RS18935 (3938235) | 3938235..3938564 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| HWD38_RS18940 (3938871) | 3938871..3939581 | - | 711 | WP_001295798.1 | hypothetical protein | VF |
| HWD38_RS18945 (3939550) | 3939550..3941193 | - | 1644 | WP_001265646.1 | hypothetical protein | VF |
| HWD38_RS18950 (3941183) | 3941183..3943708 | - | 2526 | WP_001131109.1 | hypothetical protein | VF |
| HWD38_RS18955 (3943734) | 3943734..3944402 | - | 669 | WP_000716404.1 | hypothetical protein | VF |
| HWD38_RS18960 (3944459) | 3944459..3945046 | - | 588 | WP_000730982.1 | hypothetical protein | VF |
| HWD38_RS18965 (3945121) | 3945121..3945663 | - | 543 | WP_000389022.1 | hypothetical protein | VF |
| HWD38_RS18970 (3946487) | 3946487..3946677 | + | 191 | Protein_3711 | hypothetical protein | - |
| HWD38_RS18975 (3946747) | 3946747..3946887 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| HWD38_RS18980 (3946887) | 3946887..3947150 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| HWD38_RS18985 (3947515) | 3947515..3947616 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| HWD38_RS18990 (3948089) | 3948089..3949231 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| HWD38_RS18995 (3949404) | 3949404..3950324 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| HWD38_RS19000 (3950481) | 3950481..3951407 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator ArgP | VF |
| HWD38_RS19005 (3951607) | 3951607..3952500 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator ArgP | VF |
| HWD38_RS19010 (3952531) | 3952531..3953520 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| HWD38_RS19015 (3953547) | 3953547..3954398 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| HWD38_RS19020 (3954964) | 3954964..3959211 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| HWD38_RS19025 (3959336) | 3959336..3960193 | - | 858 | WP_000620995.1 | HTH-type transcriptional activator RhaR | VF |
| HWD38_RS19030 (3960441) | 3960441..3961310 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| HWD38_RS19035 (3961470) | 3961470..3962063 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| HWD38_RS19040 (3962075) | 3962075..3962311 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| HWD38_RS19045 (3962420) | 3962420..3963745 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| HWD38_RS19050 (3963972) | 3963972..3964826 | + | 855 | WP_134161680.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| HWD38_RS19055 (3965352) | 3965352..3966071 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| HWD38_RS19060 (3966082) | 3966082..3967509 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| HWD38_RS19065 (3967502) | 3967502..3968197 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| HWD38_RS19070 (3968440) | 3968440..3969108 | - | 669 | WP_001005267.1 | protein YkgH | - |
| HWD38_RS25525 (3969292) | 3969292..3971583 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| HWD38_RS19085 (3971625) | 3971625..3972386 | - | 762 | WP_001213045.1 | protein HyxA | - |
| HWD38_RS19090 (3972540) | 3972540..3973334 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| HWD38_RS19095 (3973664) | 3973664..3974227 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| HWD38_RS19100 (3975312) | 3975312..3976982 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| HWD38_RS19105 (3976996) | 3976996..3978468 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| HWD38_RS19110 (3978482) | 3978482..3979069 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|