MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60960 bp
Accession: NZ_CP055260 Location: 1..60960 Organism: Escherichia coli strain AH62 Replicon: plasmid pAH62-1
Accession: NZ_CP055260 Location: 1..60960 Organism: Escherichia coli strain AH62 Replicon: plasmid pAH62-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU676_RS22995 () | 1..1029 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| HU676_RS23000 () | 2628..2789 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| HU676_RS23005 () | 2939..3535 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| HU676_RS23010 () | 3553..3723 | - | 171 | WP_000186151.1 | hypothetical protein | - |
| HU676_RS23015 () | 3911..4576 | - | 666 | WP_000532149.1 | P-loop NTPase | - |
| HU676_RS23020 () | 5165..5494 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| HU676_RS23025 () | 5895..6410 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| HU676_RS23030 () | 6514..7056 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| HU676_RS23035 () | 7053..7307 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| HU676_RS23040 () | 7304..7546 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| HU676_RS23045 () | 8117..8410 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| HU676_RS23050 () | 8899..9147 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HU676_RS23055 () | 9144..9491 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HU676_RS23060 () | 9579..9761 | - | 183 | WP_001428470.1 | hypothetical protein | - |
| HU676_RS23065 () | 10263..10562 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HU676_RS23070 () | 10822..11148 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| HU676_RS23075 () | 11150..11590 | - | 441 | WP_023223352.1 | hypothetical protein | - |
| HU676_RS23080 () | 11610..12317 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| HU676_RS23085 () | 12319..13071 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| HU676_RS23090 () | 13089..13490 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| HU676_RS23095 () | 13858..14199 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| HU676_RS23100 () | 14196..18509 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| HU676_RS23105 () | 18730..20355 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| HU676_RS23110 () | 20427..21200 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| HU676_RS23115 () | 21159..21599 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| HU676_RS23120 () | 21945..22151 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| HU676_RS23125 () | 22220..24385 | - | 2166 | WP_176256655.1 | type IA DNA topoisomerase | - |
| HU676_RS23130 () | 24390..24965 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| HU676_RS23135 () | 25135..26811 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| HU676_RS23140 () | 26906..27421 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| HU676_RS23145 () | 27468..28121 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| HU676_RS23150 () | 28133..29257 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| HU676_RS23155 () | 30197..30394 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| HU676_RS23160 () | 30677..30886 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| HU676_RS23165 () | 30883..32259 | - | 1377 | WP_000750519.1 | hypothetical protein | VF |
| HU676_RS23170 () | 32272..32907 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| HU676_RS23175 () | 32911..33393 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| HU676_RS23180 () | 33459..34022 | - | 564 | WP_034169414.1 | hypothetical protein | - |
| HU676_RS23185 () | 34072..35181 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HU676_RS23190 () | 35172..36710 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| HU676_RS23195 () | 36735..37229 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| HU676_RS23200 () | 37213..38535 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| HU676_RS23205 () | 38574..40217 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| HU676_RS23210 () | 40210..40746 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| HU676_RS23215 () | 40793..42751 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HU676_RS23220 () | 42767..43822 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| HU676_RS23225 () | 43841..44980 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| HU676_RS23230 () | 44970..45671 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| HU676_RS23235 () | 45737..46471 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| HU676_RS23240 () | 46471..46605 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| HU676_RS23245 () | 46637..48994 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| HU676_RS23250 () | 49000..49320 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| HU676_RS23255 () | 49391..49579 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| HU676_RS23260 () | 49681..50265 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| HU676_RS23265 () | 50286..50684 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| HU676_RS23270 () | 50803..51240 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| HU676_RS23275 () | 51246..52481 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| HU676_RS23280 () | 52484..52783 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| HU676_RS23285 () | 52831..53640 | + | 810 | WP_024237698.1 | hypothetical protein | - |
| HU676_RS23290 () | 53863..54087 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| HU676_RS23295 () | 54096..54740 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| HU676_RS23300 () | 54746..55741 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| HU676_RS23305 () | 55745..56002 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| HU676_RS23310 () | 55999..56301 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| HU676_RS23315 () | 56282..56539 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| HU676_RS23320 () | 56572..57018 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| HU676_RS23325 () | 57029..57199 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| HU676_RS23330 () | 57203..57646 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| HU676_RS23335 () | 58020..58973 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| HU676_RS23340 () | 59000..59176 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| HU676_RS23345 () | 59169..59384 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| HU676_RS23350 () | 59377..59883 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|