MGE detailed information
MGE type: Prophage MGE length: 36486 bp
Accession: NZ_CP055199 Location: 49262..85747 Organism: Shigella flexneri strain STEFF_3 Replicon: chromosome
Accession: NZ_CP055199 Location: 49262..85747 Organism: Shigella flexneri strain STEFF_3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ39_RS00225 (44692) | 44692..45615 | - | 924 | WP_000535960.1 | carboxylate/amino acid/amine transporter | - |
| HUZ39_RS00230 (45726) | 45726..46910 | - | 1185 | WP_106464834.1 | sugar efflux transporter | - |
| HUZ39_RS00235 (47307) | 47307..47468 | - | 162 | Protein_46 | RhuM family protein | - |
| HUZ39_RS00240 (47703) | 47703..48548 | - | 846 | WP_001274561.1 | DUF4942 domain-containing protein | - |
| HUZ39_RS00245 (48633) | 48633..48830 | - | 198 | WP_000772032.1 | DUF957 domain-containing protein | - |
| HUZ39_RS00250 (48850) | 48850..49068 | - | 219 | Protein_49 | DUF5983 family protein | - |
| HUZ39_RS00255 (49262) | 49262..50803 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| HUZ39_RS00260 (50818) | 50818..51564 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HUZ39_RS00265 (51649) | 51649..51924 | - | 276 | Protein_52 | DUF5983 family protein | - |
| HUZ39_RS00270 (51921) | 51921..52298 | - | 378 | WP_001094437.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUZ39_RS00275 (52345) | 52345..52722 | - | 378 | WP_072645736.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ39_RS00280 (52885) | 52885..53106 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HUZ39_RS00285 (53169) | 53169..53645 | - | 477 | WP_001186775.1 | RadC family protein | - |
| HUZ39_RS00290 (53661) | 53661..54134 | - | 474 | WP_000855064.1 | antirestriction protein | - |
| HUZ39_RS00295 (54476) | 54476..55294 | - | 819 | WP_001234656.1 | DUF932 domain-containing protein | - |
| HUZ39_RS00300 (55412) | 55412..55607 | - | 196 | Protein_59 | DUF905 family protein | - |
| HUZ39_RS00305 (55678) | 55678..58524 | - | 2847 | WP_063122630.1 | Ag43/Cah family autotransporter adhesin | - |
| HUZ39_RS00310 (58896) | 58896..59768 | - | 873 | WP_032177942.1 | GTPase family protein | - |
| HUZ39_RS00315 (59867) | 59867..60739 | - | 873 | WP_000241617.1 | hypothetical protein | - |
| HUZ39_RS00320 (62311) | 62311..62690 | - | 380 | Protein_63 | IS21 family transposase ISEc62 | Transposase |
| HUZ39_RS00325 (63327) | 63327..63929 | - | 603 | WP_001387788.1 | hypothetical protein | - |
| HUZ39_RS00330 (64024) | 64024..64230 | - | 207 | WP_000211310.1 | AlpA family transcriptional regulator | - |
| HUZ39_RS00335 (64938) | 64938..65150 | + | 213 | WP_000453334.1 | hemolysin expression modulator Hha | - |
| HUZ39_RS00340 (65493) | 65493..65690 | - | 198 | WP_001545803.1 | hypothetical protein | - |
| HUZ39_RS00345 (65894) | 65894..66463 | + | 570 | WP_000148641.1 | inovirus Gp2 family protein | - |
| HUZ39_RS00350 (66656) | 66656..66844 | - | 189 | Protein_69 | IS66 family transposase IS682 | Transposase |
| HUZ39_RS00355 (66905) | 66905..67345 | + | 441 | Protein_70 | IS110 family transposase ISEc45 | Transposase |
| HUZ39_RS00360 (67398) | 67398..67646 | + | 249 | Protein_71 | IS3 family transposase IS1203 | Transposase |
| HUZ39_RS00365 (67714) | 67714..68496 | - | 783 | WP_072833065.1 | IS21 family transposase IS100kyp | Transposase |
| HUZ39_RS00370 (68493) | 68493..69515 | - | 1023 | WP_239637935.1 | IS21 family transposase IS100kyp | Transposase |
| HUZ39_RS00375 (69594) | 69594..70570 | + | 977 | Protein_74 | IS3 family transposase IS629 | Transposase |
| HUZ39_RS00380 (70615) | 70615..70719 | - | 105 | Protein_75 | IS66 family insertion sequence element accessory protein TnpB | - |
| HUZ39_RS00385 (70793) | 70793..71773 | + | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| HUZ39_RS00395 (72818) | 72818..74848 | - | 2031 | WP_001618954.1 | hypothetical protein | - |
| HUZ39_RS00400 (74854) | 74854..76044 | - | 1191 | WP_001618955.1 | hypothetical protein | - |
| HUZ39_RS00405 (76065) | 76065..78182 | - | 2118 | WP_032170707.1 | hypothetical protein | - |
| HUZ39_RS00410 (78187) | 78187..79596 | - | 1410 | WP_001618957.1 | Teichoic acids export ATP-binding protein TagH | VF |
| HUZ39_RS00415 (79586) | 79586..80317 | - | 732 | WP_001618958.1 | ABC transporter permease | - |
| HUZ39_RS00420 (80404) | 80404..81549 | - | 1146 | WP_001618959.1 | N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase | VF |
| HUZ39_RS00430 (82742) | 82742..83679 | - | 938 | Protein_85 | IS5 family transposase ISEcl3 | Transposase |
| HUZ39_RS00435 (83747) | 83747..84444 | + | 698 | WP_223293388.1 | IS1 family transposase IS1R | Transposase |
| HUZ39_RS00440 (84563) | 84563..85775 | - | 1213 | Protein_87 | Prophage integrase IntS ; Integrase | Integrase |
| HUZ39_RS00450 (86434) | 86434..87816 | + | 1383 | WP_106464752.1 | glycoside-pentoside-hexuronide family transporter | - |
| HUZ39_RS00455 (87826) | 87826..90144 | + | 2319 | WP_000702921.1 | alpha-xylosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|