MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_CP055184 Location: 588198..599985 Organism: Shigella flexneri strain STEFF_16 Replicon: chromosome
Accession: NZ_CP055184 Location: 588198..599985 Organism: Shigella flexneri strain STEFF_16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ44_RS02840 (583199) | 583199..583633 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| HUZ44_RS02845 (583651) | 583651..584529 | - | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HUZ44_RS02850 (584519) | 584519..585298 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HUZ44_RS02855 (585309) | 585309..585782 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HUZ44_RS02860 (585805) | 585805..587085 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HUZ44_RS02865 (587334) | 587334..588143 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HUZ44_RS02870 (588198) | 588198..588662 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HUZ44_RS02875 (588662) | 588662..588997 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HUZ44_RS02880 (589146) | 589146..590717 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| HUZ44_RS02885 (591092) | 591092..592426 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HUZ44_RS02890 (592442) | 592442..593212 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HUZ44_RS02895 (593242) | 593242..594132 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HUZ44_RS02900 (594229) | 594229..595374 | + | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| HUZ44_RS02910 (596510) | 596510..597697 | - | 1188 | WP_001676773.1 | YhaC family protein | - |
| HUZ44_RS02915 (597719) | 597719..598258 | - | 540 | WP_000675745.1 | protein YhaB | - |
| HUZ44_RS02920 (598514) | 598514..598732 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| HUZ44_RS02925 (599047) | 599047..599985 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HUZ44_RS02930 (600084) | 600084..601073 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HUZ44_RS02935 (601095) | 601095..602426 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HUZ44_RS02940 (602452) | 602452..603660 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|