MGE detailed information
MGE type: Genomic_island MGE length: 15492 bp
Accession: NZ_CP055109 Location: 2340425..2355916 Organism: Shigella flexneri strain SWHIN_104 Replicon: chromosome
Accession: NZ_CP055109 Location: 2340425..2355916 Organism: Shigella flexneri strain SWHIN_104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ82_RS11205 (2340425) | 2340425..2340691 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HUZ82_RS11210 (2340691) | 2340691..2342013 | + | 1323 | WP_001125455.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HUZ82_RS11215 (2342325) | 2342325..2342411 | + | 87 | Protein_2197 | hypothetical protein | - |
| HUZ82_RS11225 (2343742) | 2343742..2343869 | + | 128 | Protein_2199 | AraC family transcriptional regulator | - |
| HUZ82_RS11230 (2344303) | 2344303..2344497 | + | 195 | Protein_2200 | Fimbrial subunit type 1 | VF |
| HUZ82_RS11235 (2344499) | 2344499..2346694 | + | 2196 | Protein_2201 | Outer membrane usher protein FimD | VF |
| HUZ82_RS11240 (2346708) | 2346708..2347238 | + | 531 | WP_000876784.1 | Protein FimF | VF |
| HUZ82_RS11245 (2347251) | 2347251..2347754 | + | 504 | WP_032283227.1 | Protein FimG | VF |
| HUZ82_RS11250 (2347814) | 2347814..2348728 | + | 915 | WP_000520679.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| HUZ82_RS11255 (2349062) | 2349062..2351341 | + | 2280 | WP_001402249.1 | acid resistance putative oxidoreductase YdeP | - |
| HUZ82_RS11260 (2351589) | 2351589..2351786 | + | 198 | WP_000543394.1 | two-component system connector SafA | - |
| HUZ82_RS11265 (2351860) | 2351860..2352621 | + | 762 | WP_000060489.1 | acid stress response transcriptional regulator YdeO | - |
| HUZ82_RS11270 (2353025) | 2353025..2354707 | + | 1683 | WP_001295684.1 | sulfatase | - |
| HUZ82_RS11275 (2354759) | 2354759..2355916 | + | 1158 | WP_001299007.1 | anaerobic sulfatase maturase | - |
| HUZ82_RS11280 (2355882) | 2355882..2356004 | - | 123 | WP_120795387.1 | protein YneP | - |
| HUZ82_RS11285 (2356207) | 2356207..2357892 | + | 1686 | WP_000628587.1 | ABC transporter ATP-binding protein/permease | - |
| HUZ82_RS11290 (2357930) | 2357930..2360302 | + | 2373 | WP_000832445.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|