MGE detailed information
MGE type: Genomic_island MGE length: 11674 bp
Accession: NZ_CP055070 Location: 617372..629045 Organism: Shigella flexneri strain SWHIN_97 Replicon: chromosome
Accession: NZ_CP055070 Location: 617372..629045 Organism: Shigella flexneri strain SWHIN_97 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ91_RS03020 (612373) | 612373..612807 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| HUZ91_RS03025 (612825) | 612825..613703 | - | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HUZ91_RS03030 (613693) | 613693..614472 | - | 780 | WP_239606021.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HUZ91_RS03035 (614483) | 614483..614956 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HUZ91_RS03040 (614979) | 614979..616259 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HUZ91_RS03045 (616508) | 616508..617317 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HUZ91_RS03050 (617372) | 617372..617836 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HUZ91_RS03055 (617836) | 617836..618171 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HUZ91_RS03060 (618320) | 618320..619891 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| HUZ91_RS03065 (620266) | 620266..621600 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HUZ91_RS03070 (621616) | 621616..622386 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HUZ91_RS03075 (622416) | 622416..623306 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HUZ91_RS03080 (623403) | 623403..624548 | + | 1146 | WP_032298172.1 | glycerate 2-kinase | - |
| HUZ91_RS03090 (625571) | 625571..626758 | - | 1188 | WP_024238569.1 | YhaC family protein | - |
| HUZ91_RS03095 (626780) | 626780..627319 | - | 540 | Protein_606 | hypothetical protein | - |
| HUZ91_RS03100 (627575) | 627575..627793 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HUZ91_RS03105 (628107) | 628107..629045 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HUZ91_RS03110 (629144) | 629144..630133 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HUZ91_RS03115 (630155) | 630155..631486 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HUZ91_RS03120 (631512) | 631512..632720 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|