MGE detailed information
MGE type: Prophage MGE length: 24297 bp
Accession: NZ_CP055070 Location: 1970299..1994595 Organism: Shigella flexneri strain SWHIN_97 Replicon: chromosome
Accession: NZ_CP055070 Location: 1970299..1994595 Organism: Shigella flexneri strain SWHIN_97 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ91_RS09665 () | 1966442..1968253 | + | 1812 | WP_001069486.1 | phosphogluconate dehydratase | - |
| HUZ91_RS09670 () | 1968290..1968931 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HUZ91_RS09675 () | 1968987..1970165 | - | 1179 | WP_000173509.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HUZ91_RS09680 () | 1970299..1970589 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HUZ91_RS09685 () | 1970656..1970959 | + | 304 | Protein_1896 | protein YebF | - |
| HUZ91_RS09690 () | 1970988..1971685 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| HUZ91_RS09695 () | 1971688..1971789 | + | 102 | Protein_1898 | YebF family protein | - |
| HUZ91_RS09700 () | 1972116..1972775 | + | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| HUZ91_RS09705 () | 1972984..1975044 | + | 2061 | WP_023281963.1 | oligopeptidase B | - |
| HUZ91_RS09710 () | 1975041..1975703 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HUZ91_RS09715 () | 1975727..1976383 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein YobB | - |
| HUZ91_RS09720 () | 1976485..1976715 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HUZ91_RS09725 () | 1976854..1977228 | + | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| HUZ91_RS09730 () | 1977232..1978104 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| HUZ91_RS09735 () | 1978117..1978458 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 1978486..1978757 | - | 272 | - | - | Antitoxin Detail |
| - | 1978616..1978719 | + | 104 | - | - | Toxin Detail |
| HUZ91_RS09740 () | 1978854..1979510 | + | 657 | WP_239606193.1 | protein-serine/threonine phosphatase | - |
| HUZ91_RS09745 () | 1979511..1979702 | - | 192 | WP_001338167.1 | YebW family protein | - |
| HUZ91_RS09750 () | 1979807..1980043 | - | 237 | WP_001338166.1 | YebV family protein | - |
| HUZ91_RS09755 () | 1980161..1981600 | - | 1440 | WP_001338165.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HUZ91_RS09760 () | 1981680..1984313 | - | 2634 | WP_001297532.1 | hypothetical protein | VF |
| HUZ91_RS09765 () | 1984282..1985565 | - | 1284 | WP_001741872.1 | membrane integrity lipid transport subunit YebS | - |
| HUZ91_RS09770 () | 1985695..1986192 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| HUZ91_RS09775 () | 1986289..1986987 | + | 699 | WP_215268685.1 | RNA chaperone ProQ | - |
| HUZ91_RS09780 () | 1987007..1989055 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| HUZ91_RS09785 () | 1989247..1990128 | + | 882 | WP_000984517.1 | protease HtpX | - |
| HUZ91_RS09790 () | 1990174..1991547 | - | 1374 | WP_239606196.1 | MFS transporter | - |
| HUZ91_RS09795 () | 1991724..1992515 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| HUZ91_RS09800 () | 1992658..1992897 | - | 240 | WP_001211011.1 | YobH family protein | - |
| HUZ91_RS09805 () | 1993056..1993199 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| HUZ91_RS09810 () | 1993274..1993561 | + | 288 | WP_001006866.1 | YebO family protein | - |
| HUZ91_RS09815 () | 1994230..1994373 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| HUZ91_RS09820 () | 1994386..1994595 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HUZ91_RS09825 () | 1994761..1995570 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HUZ91_RS09830 () | 1995567..1996133 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| HUZ91_RS09835 () | 1996562..1997020 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| HUZ91_RS09840 () | 1997075..1997926 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| HUZ91_RS09845 () | 1997939..1998739 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|