MGE detailed information
MGE type: Genomic_island MGE length: 11673 bp
Accession: NZ_CP055000 Location: 620497..632169 Organism: Shigella flexneri strain STIN_80 Replicon: chromosome
Accession: NZ_CP055000 Location: 620497..632169 Organism: Shigella flexneri strain STIN_80 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ55_RS03045 (615498) | 615498..615932 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| HUZ55_RS03050 (615950) | 615950..616828 | - | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HUZ55_RS03055 (616818) | 616818..617597 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HUZ55_RS03060 (617608) | 617608..618081 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HUZ55_RS03065 (618104) | 618104..619384 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HUZ55_RS03070 (619633) | 619633..620442 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HUZ55_RS03075 (620497) | 620497..620961 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HUZ55_RS03080 (620961) | 620961..621296 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HUZ55_RS03085 (621445) | 621445..623016 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| HUZ55_RS03090 (623391) | 623391..624725 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HUZ55_RS03095 (624741) | 624741..625511 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HUZ55_RS03100 (625541) | 625541..626431 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HUZ55_RS03105 (626528) | 626528..627673 | + | 1146 | WP_032298172.1 | glycerate 2-kinase | - |
| HUZ55_RS03115 (628696) | 628696..629883 | - | 1188 | WP_024238569.1 | YhaC family protein | - |
| HUZ55_RS03120 (629905) | 629905..630443 | - | 539 | Protein_613 | protein YhaB | - |
| HUZ55_RS03125 (630699) | 630699..630917 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HUZ55_RS03130 (631231) | 631231..632169 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HUZ55_RS03135 (632268) | 632268..633257 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HUZ55_RS03140 (633279) | 633279..634610 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HUZ55_RS03145 (634636) | 634636..635844 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|