MGE detailed information
MGE type: Genomic_island MGE length: 10895 bp
Accession: NZ_CP055000 Location: 2341742..2352636 Organism: Shigella flexneri strain STIN_80 Replicon: chromosome
Accession: NZ_CP055000 Location: 2341742..2352636 Organism: Shigella flexneri strain STIN_80 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ55_RS11475 (2341742) | 2341742..2342008 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HUZ55_RS11480 (2342008) | 2342008..2343330 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HUZ55_RS11485 (2343642) | 2343642..2343850 | + | 209 | Protein_2256 | AraC family transcriptional regulator | - |
| HUZ55_RS11490 (2344105) | 2344105..2345331 | + | 1227 | Protein_2257 | Outer membrane usher protein FimD | VF |
| HUZ55_RS11495 (2345345) | 2345345..2345875 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| HUZ55_RS11500 (2345888) | 2345888..2346391 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| HUZ55_RS11505 (2346450) | 2346450..2347364 | + | 915 | WP_096037849.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| HUZ55_RS11510 (2347698) | 2347698..2349977 | + | 2280 | WP_239592421.1 | acid resistance putative oxidoreductase YdeP | - |
| HUZ55_RS11515 (2350225) | 2350225..2350422 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| HUZ55_RS11520 (2350497) | 2350497..2351258 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| HUZ55_RS11530 (2352049) | 2352049..2352636 | + | 588 | Protein_2265 | ATP-binding cassette domain-containing protein | - |
| HUZ55_RS11535 (2352674) | 2352674..2355046 | + | 2373 | WP_000832461.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|