MGE detailed information
MGE type: Genomic_island MGE length: 51307 bp
Accession: NZ_CP054232 Location: 2598955..2650261 Organism: Escherichia coli strain EcPF7 Replicon: chromosome
Accession: NZ_CP054232 Location: 2598955..2650261 Organism: Escherichia coli strain EcPF7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR071_RS12520 () | 2594062..2594742 | - | 681 | WP_001296536.1 | D-lyxose/D-mannose family sugar isomerase | - |
| HR071_RS12525 () | 2594723..2595655 | - | 933 | WP_000559088.1 | ROK family protein | - |
| HR071_RS12530 () | 2595703..2596563 | - | 861 | WP_000961378.1 | ketose-bisphosphate aldolase | - |
| HR071_RS12535 () | 2596644..2597495 | - | 852 | WP_000457122.1 | class II fructose-bisphosphate aldolase family protein | - |
| HR071_RS12540 () | 2597507..2598598 | - | 1092 | WP_000662206.1 | PTS fructose transporter subunit IIC | - |
| HR071_RS12545 () | 2598623..2598937 | - | 315 | WP_001028073.1 | fructose PTS transporter subunit IIB | - |
| HR071_RS12550 () | 2598955..2599425 | - | 471 | WP_000355546.1 | fructose PTS transporter subunit IIA | - |
| HR071_RS12555 () | 2599452..2601005 | - | 1554 | WP_001296537.1 | PRD domain-containing protein | - |
| HR071_RS12560 () | 2601300..2603618 | - | 2319 | WP_000702975.1 | alpha-xylosidase | - |
| HR071_RS12565 () | 2603628..2605010 | - | 1383 | WP_000834418.1 | glycoside-pentoside-hexuronide family transporter | - |
| HR071_RS12575 () | 2605696..2606890 | + | 1195 | Protein_2468 | tyrosine-type recombinase/integrase | - |
| HR071_RS12580 () | 2607326..2608369 | + | 1044 | WP_000999866.1 | hypothetical protein | - |
| HR071_RS12585 () | 2608511..2610184 | - | 1674 | WP_001490270.1 | phosphoethanolamine transferase | - |
| HR071_RS12590 () | 2610563..2612296 | - | 1734 | WP_176316566.1 | dynamin family protein | - |
| HR071_RS12595 () | 2612268..2613983 | - | 1716 | WP_001379612.1 | hypothetical protein | - |
| HR071_RS12600 () | 2613994..2614611 | - | 618 | WP_001440124.1 | hypothetical protein | - |
| HR071_RS12605 () | 2614964..2615710 | - | 747 | WP_001486234.1 | porin family protein | - |
| HR071_RS12610 () | 2615949..2616119 | + | 171 | WP_001440126.1 | hypothetical protein | - |
| HR071_RS12615 () | 2616435..2617140 | + | 706 | Protein_2476 | DUF4365 domain-containing protein | - |
| HR071_RS12620 () | 2617674..2618600 | - | 927 | WP_000256718.1 | hypothetical protein | - |
| HR071_RS12625 () | 2618590..2620281 | - | 1692 | WP_042098510.1 | ATP-binding protein | - |
| HR071_RS12630 () | 2620278..2621468 | - | 1191 | WP_001277856.1 | restriction endonuclease subunit S | - |
| HR071_RS12635 () | 2621465..2623099 | - | 1635 | WP_000627733.1 | type I restriction-modification system subunit M | - |
| HR071_RS12640 () | 2623163..2626576 | - | 3414 | WP_000438164.1 | DEAD/DEAH box helicase family protein | - |
| HR071_RS12645 () | 2627851..2628474 | + | 624 | WP_000658303.1 | MmcB family DNA repair protein | - |
| HR071_RS12650 () | 2628460..2629488 | - | 1029 | WP_000714421.1 | beta family protein | - |
| HR071_RS12655 () | 2629492..2630034 | - | 543 | WP_000875105.1 | ImmA/IrrE family metallo-endopeptidase | - |
| HR071_RS12660 () | 2630035..2630493 | - | 459 | WP_001440133.1 | hypothetical protein | - |
| HR071_RS12665 () | 2631121..2631399 | - | 279 | WP_001536430.1 | PerC family transcriptional regulator | - |
| HR071_RS12670 () | 2631910..2632356 | - | 447 | WP_001407729.1 | type VI secretion system contractile sheath small subunit | - |
| HR071_RS12675 () | 2632863..2633054 | + | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| HR071_RS12680 () | 2633107..2633340 | - | 234 | WP_000124171.1 | hypothetical protein | - |
| HR071_RS12685 () | 2633437..2634060 | - | 624 | WP_001260379.1 | hypothetical protein | - |
| HR071_RS12690 () | 2634579..2634806 | - | 228 | WP_155522400.1 | hypothetical protein | - |
| HR071_RS12695 () | 2635131..2635607 | + | 477 | WP_000258199.1 | ProQ/FinO family protein | - |
| HR071_RS12700 () | 2635609..2636157 | - | 549 | WP_001167448.1 | hypothetical protein | - |
| HR071_RS12705 () | 2636430..2636660 | - | 231 | WP_000958491.1 | AlpA family transcriptional regulator | - |
| HR071_RS12710 () | 2636729..2637301 | - | 573 | WP_001013349.1 | hypothetical protein | - |
| HR071_RS12715 () | 2637685..2638416 | - | 732 | WP_001075477.1 | inovirus Gp2 family protein | - |
| HR071_RS12720 () | 2640220..2641239 | + | 1020 | WP_000056316.1 | hypothetical protein | - |
| HR071_RS12725 () | 2641260..2641454 | - | 195 | WP_001304548.1 | hypothetical protein | - |
| HR071_RS12730 () | 2641448..2642332 | + | 885 | WP_000010385.1 | 50S ribosome-binding GTPase | - |
| HR071_RS12735 () | 2642535..2643215 | + | 681 | WP_063611088.1 | WYL domain-containing protein | - |
| HR071_RS12740 () | 2643366..2644043 | + | 678 | WP_001097567.1 | hypothetical protein | - |
| HR071_RS12745 () | 2644049..2644282 | + | 234 | WP_001278284.1 | DUF905 family protein | - |
| HR071_RS12750 () | 2644372..2645190 | + | 819 | WP_063611089.1 | DUF945 domain-containing protein | - |
| HR071_RS12755 () | 2645282..2645767 | + | 486 | WP_000213721.1 | antirestriction protein | - |
| HR071_RS12760 () | 2645783..2646259 | + | 477 | WP_001186201.1 | RadC family protein | - |
| HR071_RS12765 () | 2646328..2646549 | + | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| HR071_RS12770 () | 2646712..2647080 | + | 369 | WP_001285645.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HR071_RS12775 () | 2647170..2647544 | + | 375 | WP_000854775.1 | TA system toxin CbtA family protein | Toxin Detail |
| HR071_RS12780 () | 2647541..2648032 | + | 492 | WP_000976825.1 | hypothetical protein | - |
| HR071_RS12785 () | 2648044..2648241 | + | 198 | WP_000772035.1 | DUF957 domain-containing protein | - |
| HR071_RS12790 () | 2648326..2649168 | + | 843 | WP_001274548.1 | DUF4942 domain-containing protein | - |
| HR071_RS12795 () | 2649764..2650261 | + | 498 | WP_000509815.1 | hypothetical protein | - |
| HR071_RS12800 () | 2650439..2651362 | + | 924 | WP_000535950.1 | carboxylate/amino acid/amine transporter | - |
| HR071_RS12805 () | 2651366..2652184 | - | 819 | WP_000779409.1 | lipoprotein NlpA | - |
| HR071_RS12810 () | 2652406..2652699 | + | 294 | WP_001296563.1 | hypothetical protein | - |
| HR071_RS12815 () | 2652740..2653930 | - | 1191 | WP_001288551.1 | purine ribonucleoside efflux pump NepI | - |
| HR071_RS12820 () | 2654164..2654517 | + | 354 | WP_122984431.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HR071_RS12825 () | 2654501..2654824 | + | 324 | WP_000125640.1 | DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|