MGE detailed information
MGE type: Genomic_island MGE length: 57328 bp
Accession: NZ_CP054214 Location: 303956..361283 Organism: Escherichia coli strain EcPF40 Replicon: chromosome
Accession: NZ_CP054214 Location: 303956..361283 Organism: Escherichia coli strain EcPF40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR076_RS01360 () | 300685..301404 | - | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
| HR076_RS01365 () | 301401..303032 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| HR076_RS01370 () | 303213..303443 | + | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| HR076_RS01375 () | 303455..303727 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HR076_RS01380 () | 303956..304252 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HR076_RS01385 () | 304280..304453 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HR076_RS01390 () | 304572..306089 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| HR076_RS01395 () | 306326..307783 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| HR076_RS01400 () | 307842..309989 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| HR076_RS01405 () | 310069..311403 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HR076_RS01410 () | 311769..313307 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HR076_RS01415 () | 314056..314625 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| HR076_RS01420 () | 314722..314919 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| HR076_RS01425 () | 314931..315419 | - | 489 | WP_000777545.1 | hypothetical protein | - |
| HR076_RS01430 () | 315416..315790 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| HR076_RS01435 () | 315880..316248 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HR076_RS01440 () | 316411..316632 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| HR076_RS01445 () | 316695..317171 | - | 477 | WP_001186786.1 | RadC family protein | - |
| HR076_RS01450 () | 317187..317672 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| HR076_RS01455 () | 317763..318581 | - | 819 | WP_001773857.1 | DUF945 domain-containing protein | - |
| HR076_RS01460 () | 318671..318904 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| HR076_RS01465 () | 318910..319587 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| HR076_RS01470 () | 319735..320415 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HR076_RS01475 () | 320618..321502 | - | 885 | WP_001116801.1 | 50S ribosome-binding GTPase | - |
| HR076_RS01480 () | 321603..322826 | + | 1224 | WP_001773856.1 | hypothetical protein | - |
| HR076_RS01485 () | 324279..325010 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| HR076_RS01490 () | 325357..325932 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| HR076_RS01495 () | 326001..326234 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HR076_RS01500 () | 326246..326471 | + | 226 | Protein_287 | hypothetical protein | - |
| HR076_RS01505 () | 326533..326799 | - | 267 | Protein_288 | IS3 family transposase IS2 | Transposase |
| HR076_RS01510 () | 326890..328047 | + | 1158 | Protein_289 | Multidrug resistance protein MexB | VF |
| HR076_RS01515 () | 328168..328818 | + | 651 | Protein_290 | TetR/AcrR family transcriptional regulator | - |
| HR076_RS01520 () | 328790..329134 | + | 345 | Protein_291 | Transposon Tn10 TetD protein | VF |
| HR076_RS01525 () | 329491..330036 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| HR076_RS01530 () | 330081..331232 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| HR076_RS01535 () | 331361..332416 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| HR076_RS01540 () | 332433..333662 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| HR076_RS01545 () | 334245..334766 | - | 522 | WP_000237741.1 | maturase | - |
| HR076_RS01550 () | 334794..335333 | - | 540 | WP_001332064.1 | maturase | - |
| HR076_RS01555 () | 335819..336724 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| HR076_RS01560 () | 336861..337778 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| HR076_RS01565 () | 337887..340439 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| HR076_RS01570 () | 340488..341063 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| HR076_RS01575 () | 341074..341373 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| HR076_RS01580 () | 341397..342914 | - | 1518 | WP_001773853.1 | Aldehyde-alcohol dehydrogenase | VF |
| HR076_RS01585 () | 342975..343760 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| HR076_RS01590 () | 343782..344063 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| HR076_RS01595 () | 344348..345544 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| HR076_RS01600 () | 345573..346070 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| HR076_RS01605 () | 346098..346367 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| HR076_RS01610 () | 346379..347083 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| HR076_RS01615 () | 347088..347846 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| HR076_RS01620 () | 347901..348587 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| HR076_RS01625 () | 348727..349845 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| HR076_RS01630 () | 350232..350695 | + | 464 | Protein_313 | DNA-binding protein | - |
| HR076_RS01635 () | 350791..351024 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| HR076_RS01640 () | 351077..351268 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| HR076_RS01645 () | 351930..352298 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| HR076_RS01650 () | 352268..352768 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| HR076_RS01655 () | 353007..354128 | + | 1122 | WP_042067354.1 | hypothetical protein | - |
| HR076_RS01660 () | 354260..356044 | + | 1785 | WP_000269403.1 | KAP family P-loop domain protein | - |
| HR076_RS01665 () | 356044..356796 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| HR076_RS01670 () | 356778..358097 | + | 1320 | WP_000508958.1 | hypothetical protein | - |
| HR076_RS01675 () | 358094..358819 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| HR076_RS01680 () | 359372..359947 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| HR076_RS01685 () | 359955..361283 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| HR076_RS01690 () | 361418..361603 | - | 186 | Protein_325 | transposase domain-containing protein | - |
| HR076_RS01695 () | 361624..362780 | - | 1157 | Protein_326 | IS3 family transposase | - |
| HR076_RS01700 () | 362850..363197 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| HR076_RS01705 () | 363815..364508 | - | 694 | Protein_328 | IS1 family transposase | - |
| HR076_RS01710 () | 364761..366230 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|