MGE detailed information
MGE type: Genomic_island MGE length: 40865 bp
Accession: NZ_CP054191 Location: 4368069..4408933 Organism: Escherichia coli strain TH9F11 Replicon: chromosome
Accession: NZ_CP054191 Location: 4368069..4408933 Organism: Escherichia coli strain TH9F11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRL54_RS21255 (4364502) | 4364502..4365719 | - | 1218 | WP_085960558.1 | phosphoglycerate transport regulator PgtC | - |
| HRL54_RS21260 (4366118) | 4366118..4367482 | + | 1365 | WP_072644812.1 | phosphoglycerate transporter PgtP | - |
| HRL54_RS21265 (4367525) | 4367525..4367890 | + | 366 | WP_000639468.1 | hypothetical protein | - |
| HRL54_RS21270 (4367978) | 4367978..4368242 | + | 265 | Protein_4158 | IS3 family transposase ISEc48 | Transposase |
| HRL54_RS21275 (4368431) | 4368431..4369444 | - | 1014 | WP_000107479.1 | aldose 1-epimerase family protein | - |
| HRL54_RS21280 (4369456) | 4369456..4370772 | - | 1317 | WP_000998349.1 | L-fucose:H+ symporter permease | - |
| HRL54_RS21285 (4370800) | 4370800..4371720 | - | 921 | WP_000350265.1 | ribokinase | - |
| HRL54_RS21290 (4372024) | 4372024..4372806 | + | 783 | WP_001347893.1 | DeoR family transcriptional regulator | - |
| HRL54_RS21295 (4372808) | 4372808..4373034 | - | 227 | Protein_4163 | acetolactate synthase small subunit | - |
| HRL54_RS21300 (4374201) | 4374201..4374767 | - | 567 | WP_000287902.1 | inovirus-type Gp2 protein | - |
| HRL54_RS21305 (4374795) | 4374795..4374992 | - | 198 | WP_000553833.1 | inovirus-type Gp2 protein | - |
| HRL54_RS21310 (4375239) | 4375239..4375331 | - | 93 | Protein_4166 | hypothetical protein | - |
| HRL54_RS21315 (4375420) | 4375420..4376442 | + | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| HRL54_RS21320 (4376439) | 4376439..4377221 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| HRL54_RS21325 (4377288) | 4377288..4377623 | - | 336 | Protein_4169 | zinc-ribbon domain-containing protein | - |
| HRL54_RS21330 (4377620) | 4377620..4378003 | - | 384 | WP_000270955.1 | putative zinc ribbon protein | - |
| HRL54_RS21335 (4378375) | 4378375..4378974 | - | 600 | WP_000860849.1 | inovirus-type Gp2 protein | - |
| HRL54_RS21340 (4379206) | 4379206..4379355 | - | 150 | WP_072146520.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HRL54_RS21345 (4380422) | 4380422..4381213 | + | 792 | WP_001367564.1 | hypothetical protein | - |
| HRL54_RS21350 (4381597) | 4381597..4381803 | + | 207 | WP_001347898.1 | AlpA family transcriptional regulator | - |
| HRL54_RS21355 (4381891) | 4381891..4382499 | + | 609 | WP_000782651.1 | hypothetical protein | - |
| HRL54_RS21360 (4383149) | 4383149..4383250 | + | 102 | Protein_4176 | ATP-binding protein | - |
| HRL54_RS21365 (4384466) | 4384466..4385641 | + | 1176 | WP_072644869.1 | hypothetical protein | - |
| HRL54_RS21370 (4386150) | 4386150..4389782 | - | 3633 | WP_072644865.1 | hypothetical protein | - |
| HRL54_RS21375 (4390268) | 4390268..4391140 | + | 873 | WP_001069790.1 | GTPase family protein | - |
| HRL54_RS21380 (4391512) | 4391512..4394358 | + | 2847 | WP_021548587.1 | Ag43/Cah family autotransporter adhesin | - |
| HRL54_RS21385 (4394686) | 4394686..4395504 | + | 819 | WP_001234381.1 | DUF932 domain-containing protein | - |
| HRL54_RS21390 (4395596) | 4395596..4396081 | + | 486 | WP_000214415.1 | antirestriction protein | - |
| HRL54_RS21395 (4396097) | 4396097..4396573 | + | 477 | WP_001186725.1 | RadC family protein | - |
| HRL54_RS21400 (4396642) | 4396642..4396863 | + | 222 | WP_000692346.1 | DUF987 domain-containing protein | - |
| HRL54_RS21405 (4396937) | 4396937..4397212 | + | 276 | WP_072644870.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| HRL54_RS21410 (4397209) | 4397209..4397697 | + | 489 | WP_000761717.1 | DUF5983 family protein | - |
| HRL54_RS21415 (4397709) | 4397709..4397906 | + | 198 | WP_000838536.1 | DUF957 domain-containing protein | - |
| HRL54_RS21420 (4397991) | 4397991..4398833 | + | 843 | WP_001280499.1 | DUF4942 domain-containing protein | - |
| HRL54_RS21425 (4399582) | 4399582..4401120 | + | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HRL54_RS21430 (4401486) | 4401486..4402820 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HRL54_RS21435 (4402900) | 4402900..4405047 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HRL54_RS21440 (4405106) | 4405106..4406563 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| HRL54_RS21445 (4406800) | 4406800..4408317 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HRL54_RS21450 (4408436) | 4408436..4408609 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HRL54_RS21455 (4408637) | 4408637..4408933 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HRL54_RS21460 (4409160) | 4409160..4409432 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| HRL54_RS21465 (4409444) | 4409444..4409674 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HRL54_RS21470 (4409855) | 4409855..4411486 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| HRL54_RS21475 (4411483) | 4411483..4412202 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|