NZ_CP0541232344477..2506072

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161596 bp
Accession: NZ_CP054123        Location: 2344477..2506072         Organism: Bordetella pertussis strain NZ6       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HRJ60_RS11300 (HRJ60_11225) 2339674..2341575 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
HRJ60_RS11305 (HRJ60_11230) 2341624..2342418 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
HRJ60_RS11310 (HRJ60_11235) 2342431..2343432 - 1002 WP_010930515.1 LD-carboxypeptidase -
HRJ60_RS11315 (HRJ60_11240) 2343429..2343935 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
HRJ60_RS11320 (HRJ60_11245) 2343928..2344776 - 849 WP_010930513.1 HAD family hydrolase -
HRJ60_RS11325 (HRJ60_11250) 2344874..2345416 - 543 WP_019247780.1 hypothetical protein -
HRJ60_RS11330 (HRJ60_11255) 2345460..2346410 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ60_RS11335 (HRJ60_11260) 2346566..2346892 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
HRJ60_RS11340 (HRJ60_11265) 2346889..2347173 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
HRJ60_RS11345 (HRJ60_11270) 2347170..2347649 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
HRJ60_RS11350 (HRJ60_11275) 2347646..2349274 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
HRJ60_RS11355 (HRJ60_11280) 2349271..2349615 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
HRJ60_RS11360 (HRJ60_11285) 2349615..2352548 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
HRJ60_RS11365 (HRJ60_11290) 2352970..2353707 + 738 Protein_2229 tripartite tricarboxylate transporter substrate-binding protein -
HRJ60_RS11370 (HRJ60_11295) 2353707..2354657 - 951 WP_010929588.1 IS481 family transposase IS481v1 Transposase
HRJ60_RS11375 (HRJ60_11300) 2354756..2355052 - 297 WP_003811452.1 hypothetical protein -
HRJ60_RS11380 (HRJ60_11305) 2355174..2356076 + 903 WP_023995058.1 HTH-type transcriptional regulator CynR VF
HRJ60_RS11385 (HRJ60_11310) 2356081..2356794 - 714 WP_010930507.1 Sulfoquinovose 1-dehydrogenase VF
HRJ60_RS11390 (HRJ60_11315) 2356808..2357779 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ60_RS11395 (HRJ60_11320) 2357904..2359232 - 1329 Protein_2235 amidohydrolase family protein -
HRJ60_RS11400 (HRJ60_11325) 2359499..2359879 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
HRJ60_RS11405 (HRJ60_11330) 2359883..2361070 + 1188 WP_010930504.1 MFS transporter -
HRJ60_RS11410 (HRJ60_11335) 2361094..2361516 + 423 Protein_2238 arsenate reductase (glutaredoxin) -
HRJ60_RS11415 (HRJ60_11340) 2361509..2362231 + 723 WP_010930503.1 arsenical resistance protein ArsH -
HRJ60_RS11420 (HRJ60_11345) 2362228..2362419 - 192 WP_023852764.1 hypothetical protein -
HRJ60_RS11425 (HRJ60_11350) 2362525..2363475 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ60_RS11430 (HRJ60_11355) 2363472..2363900 - 429 WP_019249376.1 hypothetical protein -
HRJ60_RS11435 (HRJ60_11360) 2363897..2365287 - 1391 Protein_2243 Arylsulfatase VF
HRJ60_RS11440 (HRJ60_11365) 2365302..2366264 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ60_RS11445 (HRJ60_11370) 2366380..2367333 + 954 WP_010930502.1 LysR family transcriptional regulator -
HRJ60_RS11450 (HRJ60_11375) 2367343..2368335 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ60_RS11455 (HRJ60_11380) 2368387..2369142 - 756 WP_010930500.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRJ60_RS11460 (HRJ60_11385) 2369207..2369887 - 681 WP_019248752.1 SDR family oxidoreductase -
HRJ60_RS11465 (HRJ60_11390) 2369977..2371068 + 1092 WP_023997526.1 fumarylacetoacetate hydrolase family protein -
HRJ60_RS11470 (HRJ60_11395) 2371099..2372295 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
HRJ60_RS11475 (HRJ60_11400) 2372292..2373065 + 774 WP_010930496.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRJ60_RS11480 (HRJ60_11405) 2373082..2374104 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ60_RS11485 (HRJ60_11410) 2374190..2375134 + 945 WP_010930494.1 LysR family transcriptional regulator -
HRJ60_RS11490 (HRJ60_11415) 2375112..2375981 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
HRJ60_RS11495 (HRJ60_11420) 2376225..2376848 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
HRJ60_RS11500 (HRJ60_11425) 2376981..2377160 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HRJ60_RS11505 (HRJ60_11430) 2377163..2377462 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
HRJ60_RS11510 (HRJ60_11435) 2377476..2380550 - 3075 WP_023995112.1 autotransporter SphB2 -
HRJ60_RS11515 (HRJ60_11440) 2380680..2381354 + 675 WP_010930489.1 putative transcriptional regulatory protein NarL VF
HRJ60_RS11520 (HRJ60_11445) 2381347..2383161 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
HRJ60_RS11525 (HRJ60_11450) 2383215..2384162 - 948 WP_010930487.1 hypothetical protein -
HRJ60_RS11530 (HRJ60_11455) 2384267..2385217 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ60_RS11535 (HRJ60_11460) 2385233..2385691 - 459 Protein_2263 spermidine synthase -
HRJ60_RS11540 (HRJ60_11465) 2385770..2387395 - 1626 WP_023852967.1 Arylsulfatase VF
HRJ60_RS11545 (HRJ60_11470) 2387445..2388479 - 1035 WP_010930475.1 HAD family hydrolase -
HRJ60_RS11550 (HRJ60_11475) 2388482..2389828 - 1347 WP_010930476.1 BatD family protein -
HRJ60_RS11555 (HRJ60_11480) 2389825..2391339 - 1515 WP_010930477.1 VWA domain-containing protein -
HRJ60_RS11560 (HRJ60_11485) 2391330..2392340 - 1011 WP_010930478.1 VWA domain-containing protein -
HRJ60_RS11565 (HRJ60_11490) 2392327..2392817 - 491 Protein_2269 DUF4381 domain-containing protein -
HRJ60_RS11570 (HRJ60_11495) 2392814..2393755 - 942 WP_010930479.1 DUF58 domain-containing protein -
HRJ60_RS11575 (HRJ60_11500) 2393764..2394732 - 969 WP_010930480.1 AAA family ATPase -
HRJ60_RS11580 (HRJ60_11505) 2394788..2395928 - 1141 Protein_2272 formylglycine-generating enzyme family protein -
HRJ60_RS11585 (HRJ60_11510) 2396272..2397240 + 969 WP_010930481.1 transporter -
HRJ60_RS11590 (HRJ60_11515) 2397418..2398407 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ60_RS11595 (HRJ60_11520) 2398454..2399212 + 759 WP_010926609.1 Dihydroanticapsin 7-dehydrogenase VF
HRJ60_RS11600 (HRJ60_11525) 2399402..2400139 + 738 WP_010930483.1 TerC family protein -
HRJ60_RS11605 (HRJ60_11530) 2400238..2401188 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ60_RS11610 (HRJ60_11540) 2401373..2402155 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
HRJ60_RS11615 (HRJ60_11545) 2402149..2402850 + 702 WP_003810743.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF VF
HRJ60_RS11620 (HRJ60_11550) 2403090..2403692 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
HRJ60_RS11625 (HRJ60_11555) 2403668..2404582 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
HRJ60_RS11630 (HRJ60_11560) 2405019..2405969 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ60_RS11635 (HRJ60_11565) 2405966..2407522 - 1557 WP_014486074.1 hypothetical protein VF
HRJ60_RS11640 (HRJ60_11570) 2407515..2408288 - 774 WP_010930486.1 putative oxidoreductase VF
HRJ60_RS11645 (HRJ60_11575) 2408347..2409297 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ60_RS11650 (HRJ60_11580) 2409379..2410554 - 1176 WP_023852812.1 hypothetical protein VF
HRJ60_RS11655 (HRJ60_11585) 2410568..2412625 - 2058 WP_010930473.1 hypothetical protein VF
HRJ60_RS11660 (HRJ60_11590) 2412622..2413647 - 1026 WP_010930472.1 UDP-N-acetylglucosamine 4-epimerase VF
HRJ60_RS11665 (HRJ60_11595) 2413659..2414948 - 1290 WP_010930471.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
HRJ60_RS11670 (HRJ60_11600) 2414971..2416068 - 1098 WP_010930470.1 hypothetical protein VF
HRJ60_RS11675 (HRJ60_11605) 2416065..2416955 - 891 WP_003811224.1 capsular polysaccharide biosynthesis protein -
HRJ60_RS11680 (HRJ60_11610) 2416952..2419036 - 2085 WP_010930469.1 Putative glycosyltransferase EpsF VF
HRJ60_RS11685 (HRJ60_11615) 2419068..2420237 - 1170 WP_010930468.1 capsule polysaccharide transporter -
HRJ60_RS11690 (HRJ60_11620) 2420279..2421019 - 741 WP_014486073.1 Polysialic acid transport ATP-binding protein KpsT VF
HRJ60_RS11695 (HRJ60_11625) 2421019..2421789 - 771 WP_010930466.1 Polysialic acid transport protein KpsM VF
HRJ60_RS11700 (HRJ60_11630) 2422114..2422281 + 168 WP_019247171.1 hypothetical protein -
HRJ60_RS11705 (HRJ60_11635) 2422549..2423430 + 882 WP_023995078.1 Putative glycosyltransferase EpsH VF
HRJ60_RS11710 (HRJ60_11640) 2423457..2425541 + 2085 WP_010930464.1 hypothetical protein -
HRJ60_RS11715 (HRJ60_11645) 2425679..2427664 + 1986 WP_010930463.1 hypothetical protein VF
HRJ60_RS11720 (HRJ60_11650) 2427988..2428488 - 501 WP_003811209.1 DNA protection during starvation protein 2 VF
HRJ60_RS11725 (HRJ60_11655) 2428587..2430113 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
HRJ60_RS11730 (HRJ60_11660) 2430251..2431138 + 888 WP_010930460.1 HTH-type transcriptional regulator DmlR VF
HRJ60_RS11735 (HRJ60_11665) 2431153..2432106 - 954 WP_003811203.1 Hydrogen peroxide-inducible genes activator VF
HRJ60_RS11740 (HRJ60_11670) 2432158..2434248 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
HRJ60_RS11745 (HRJ60_11675) 2434264..2434650 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
HRJ60_RS11750 (HRJ60_11680) 2434827..2437180 - 2354 Protein_2306 Pertactin autotransporter VF
HRJ60_RS11755 (HRJ60_11685) 2437344..2438147 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
HRJ60_RS11760 (HRJ60_11690) 2438219..2439339 - 1121 Protein_2308 MFS transporter -
HRJ60_RS11765 (HRJ60_11695) 2439441..2440343 + 903 WP_010930456.1 HTH-type transcriptional regulator DmlR VF
HRJ60_RS11770 (HRJ60_11700) 2440408..2441184 - 777 WP_003811187.1 ferredoxin--NADP reductase -
HRJ60_RS11775 (HRJ60_11705) 2441506..2442555 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
HRJ60_RS11780 (HRJ60_11710) 2442679..2444349 + 1671 WP_010930454.1 iron ABC transporter permease -
HRJ60_RS11785 (HRJ60_11715) 2444354..2445148 + 795 WP_019248220.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
HRJ60_RS11790 (HRJ60_11720) 2445247..2446197 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ60_RS11795 (HRJ60_11725) 2446217..2447122 - 906 WP_010930453.1 pirin family protein -
HRJ60_RS11800 (HRJ60_11730) 2447200..2447898 - 699 WP_003811176.1 pirin family protein -
HRJ60_RS11805 (HRJ60_11735) 2448058..2449002 + 945 WP_010930452.1 HTH-type transcriptional regulator YhaJ VF
HRJ60_RS11810 (HRJ60_11740) 2449012..2450499 - 1488 WP_010930451.1 DNA-binding transcriptional regulator NtrC VF
HRJ60_RS11815 (HRJ60_11745) 2450499..2451566 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
HRJ60_RS11820 (HRJ60_11750) 2451630..2453042 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
HRJ60_RS11825 (HRJ60_11755) 2453228..2454448 - 1221 WP_010930450.1 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR VF
HRJ60_RS11830 (HRJ60_11760) 2454470..2455420 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ60_RS11835 (HRJ60_11765) 2455519..2456160 - 642 WP_010930449.1 dITP/XTP pyrophosphatase VF
HRJ60_RS11840 (HRJ60_11770) 2456287..2458089 + 1803 WP_010930448.1 EAL domain-containing protein -
HRJ60_RS11845 (HRJ60_11775) 2458228..2459658 - 1431 Protein_2325 Methyl-accepting chemotaxis protein I VF
HRJ60_RS11850 (HRJ60_11780) 2459741..2460646 - 906 WP_003811152.1 LysR family transcriptional regulator -
HRJ60_RS11855 (HRJ60_11785) 2460828..2462204 + 1377 WP_010930446.1 MmgE/PrpD family protein -
HRJ60_RS11860 (HRJ60_11790) 2462371..2463111 - 741 WP_003811149.1 ribonuclease PH -
HRJ60_RS11865 (HRJ60_11795) 2463248..2464174 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
HRJ60_RS11870 (HRJ60_11800) 2464447..2464602 + 156 WP_010930445.1 hypothetical protein -
HRJ60_RS19790 2464615..2464743 + 129 WP_010928840.1 hypothetical protein -
HRJ60_RS11875 (HRJ60_11805) 2464740..2465024 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
HRJ60_RS11880 (HRJ60_11810) 2465083..2466573 - 1491 WP_003811138.1 AMP nucleosidase -
HRJ60_RS11885 (HRJ60_11815) 2466818..2467417 + 600 WP_003811137.1 Murein DD-endopeptidase MepH VF
HRJ60_RS11890 (HRJ60_11820) 2467422..2468192 - 771 WP_003811135.1 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) VF
HRJ60_RS11895 (HRJ60_11825) 2468430..2469143 + 714 WP_010930444.1 Cytochrome c4 VF
HRJ60_RS11900 (HRJ60_11830) 2469140..2470057 + 918 WP_010930443.1 c-type cytochrome -
HRJ60_RS11905 (HRJ60_11835) 2470193..2470825 + 633 WP_010930442.1 guanylate kinase -
HRJ60_RS11910 (HRJ60_11840) 2470867..2471070 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
HRJ60_RS11915 (HRJ60_11845) 2471095..2473374 + 2280 WP_010930440.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
HRJ60_RS11920 (HRJ60_11850) 2473387..2474115 - 729 WP_003811113.1 Glutamine transport ATP-binding protein GlnQ VF
HRJ60_RS11925 (HRJ60_11855) 2474112..2474771 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
HRJ60_RS11930 (HRJ60_11860) 2474840..2475592 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
HRJ60_RS11935 (HRJ60_11865) 2475774..2476724 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ60_RS11940 (HRJ60_11870) 2476883..2477531 + 649 Protein_2345 site-2 protease family protein -
HRJ60_RS11945 (HRJ60_11875) 2477617..2478522 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
HRJ60_RS11950 (HRJ60_11880) 2478534..2479661 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
HRJ60_RS11955 (HRJ60_11885) 2479750..2480364 - 615 WP_010930436.1 Major fimbrial subunit SMF-1 VF
HRJ60_RS11960 (HRJ60_11890) 2480411..2480746 - 336 WP_240076245.1 hypothetical protein -
HRJ60_RS11965 (HRJ60_11895) 2481015..2482202 - 1188 WP_010930435.1 cupin domain-containing protein -
HRJ60_RS11970 (HRJ60_11900) 2482199..2484796 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
HRJ60_RS11975 (HRJ60_11905) 2485051..2485266 + 216 WP_010930433.1 dodecin family protein -
HRJ60_RS11980 (HRJ60_11910) 2485722..2486276 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
HRJ60_RS11985 (HRJ60_11915) 2486544..2487104 + 561 WP_010930431.1 membrane protein -
HRJ60_RS11990 (HRJ60_11920) 2487216..2488520 + 1305 WP_023853587.1 imelysin family protein -
HRJ60_RS11995 (HRJ60_11925) 2488517..2490028 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
HRJ60_RS12000 (HRJ60_11930) 2490080..2491135 + 1056 WP_224019495.1 imelysin family protein -
HRJ60_RS12005 (HRJ60_11935) 2491125..2492237 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
HRJ60_RS12010 (HRJ60_11940) 2492336..2493286 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ60_RS12015 (HRJ60_11945) 2493283..2493909 - 627 WP_010928449.1 L-threonylcarbamoyladenylate synthase -
HRJ60_RS12020 (HRJ60_11950) 2493969..2494820 + 852 WP_010930427.1 neutral zinc metallopeptidase -
HRJ60_RS12025 (HRJ60_11955) 2494924..2495523 + 600 WP_010930426.1 hypothetical protein -
HRJ60_RS12030 (HRJ60_11960) 2495520..2496284 + 765 WP_010930425.1 hypothetical protein -
HRJ60_RS12035 (HRJ60_11965) 2496354..2497304 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ60_RS12040 (HRJ60_11970) 2497403..2498011 - 609 WP_010930424.1 recombination mediator RecR -
HRJ60_RS12045 (HRJ60_11975) 2498062..2498388 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
HRJ60_RS12050 (HRJ60_11980) 2498435..2500525 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
HRJ60_RS12060 (HRJ60_11990) 2501326..2504730 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
HRJ60_RS12065 (HRJ60_11995) 2504743..2507403 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
HRJ60_RS12070 (HRJ60_12000) 2507425..2507571 - 147 WP_004568212.1 hypothetical protein -
HRJ60_RS12075 (HRJ60_12005) 2507607..2508809 - 1203 WP_010930419.1 MFS transporter -
HRJ60_RS12085 (HRJ60_12015) 2509496..2510608 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance