MGE detailed information
MGE type: Conjugative plasmid MGE length: 91397 bp
Accession: NZ_CP053984 Location: 1..91397 Organism: Achromobacter pestifer strain FDAARGOS_790 Replicon: plasmid unnamed
Accession: NZ_CP053984 Location: 1..91397 Organism: Achromobacter pestifer strain FDAARGOS_790 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC84_RS00010 () | 331..966 | - | 636 | WP_012478178.1 | hypothetical protein | - |
| FOC84_RS00015 () | 996..1343 | - | 348 | WP_011255193.1 | hypothetical protein | - |
| FOC84_RS00020 () | 1517..2539 | - | 1023 | WP_012478179.1 | DNA-binding protein | - |
| FOC84_RS00025 () | 2739..3797 | - | 1059 | WP_012478180.1 | ParB/RepB/Spo0J family partition protein | - |
| FOC84_RS00030 () | 3794..4558 | - | 765 | WP_013397098.1 | ParA family protein | - |
| FOC84_RS00035 () | 4555..4863 | - | 309 | WP_011255197.1 | transcriptional regulator | - |
| FOC84_RS00040 () | 5107..5394 | - | 288 | Protein_7 | DUF2761 domain-containing protein | - |
| FOC84_RS00045 () | 5396..5722 | - | 327 | WP_012478184.1 | hypothetical protein | - |
| FOC84_RS00050 () | 5932..6168 | - | 237 | WP_011255200.1 | stable inheritance protein KleA | - |
| FOC84_RS00055 () | 6326..6583 | - | 258 | WP_012478185.1 | hypothetical protein | - |
| FOC84_RS00060 () | 6600..7808 | - | 1209 | WP_012478186.1 | hypothetical protein | - |
| FOC84_RS00065 () | 7820..8083 | - | 264 | WP_011296181.1 | hypothetical protein | - |
| FOC84_RS00070 () | 8083..8511 | - | 429 | WP_011114069.1 | antirestriction protein | - |
| FOC84_RS00075 () | 8684..8947 | + | 264 | WP_011114070.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FOC84_RS00080 () | 8934..9215 | + | 282 | WP_011114071.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| FOC84_RS00085 () | 10601..11824 | - | 1224 | WP_011013257.1 | replication initiator protein A | - |
| FOC84_RS00090 () | 11873..12211 | - | 339 | WP_011013259.1 | single-stranded DNA-binding protein | - |
| FOC84_RS00095 () | 12321..12680 | + | 360 | WP_011013260.1 | transcriptional regulator | - |
| FOC84_RS00100 () | 12995..13960 | + | 966 | WP_011013261.1 | Type IV secretion system protein PtlH | VF |
| FOC84_RS00105 () | 13990..14454 | + | 465 | WP_011013262.1 | conjugal transfer system pilin TrbC | - |
| FOC84_RS00110 () | 14458..14769 | + | 312 | WP_011013263.1 | conjugal transfer protein TrbD | - |
| FOC84_RS00115 () | 14766..17324 | + | 2559 | WP_011013264.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| FOC84_RS00120 () | 17321..18109 | + | 789 | WP_011013265.1 | conjugal transfer protein TrbF | - |
| FOC84_RS00125 () | 18127..19020 | + | 894 | WP_014386236.1 | P-type conjugative transfer protein TrbG | - |
| FOC84_RS00130 () | 19023..19484 | + | 462 | WP_011013267.1 | conjugal transfer protein TrbH | - |
| FOC84_RS00135 () | 19488..20867 | + | 1380 | WP_012478192.1 | TrbI/VirB10 family protein | - |
| FOC84_RS00140 () | 20884..21657 | + | 774 | WP_011255135.1 | P-type conjugative transfer protein TrbJ | - |
| FOC84_RS00145 () | 21667..21888 | + | 222 | WP_011255136.1 | entry exclusion lipoprotein TrbK | - |
| FOC84_RS00150 () | 21900..23618 | + | 1719 | WP_012478193.1 | P-type conjugative transfer protein TrbL | - |
| FOC84_RS00155 () | 23637..24215 | + | 579 | WP_011255138.1 | conjugal transfer protein TrbM | - |
| FOC84_RS00160 () | 24217..24852 | + | 636 | WP_011255139.1 | hypothetical protein | VF |
| FOC84_RS00165 () | 24882..25151 | + | 270 | WP_011255140.1 | hypothetical protein | - |
| FOC84_RS00170 () | 25148..25846 | + | 699 | WP_012478194.1 | conjugal transfer protein TraX | - |
| FOC84_RS00175 () | 25862..26305 | + | 444 | WP_011255142.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| FOC84_RS00180 () | 26408..26824 | + | 417 | WP_012478195.1 | hypothetical protein | - |
| FOC84_RS00185 () | 27043..29955 | + | 2913 | WP_012478196.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| FOC84_RS00190 () | 30259..31830 | - | 1572 | WP_051705518.1 | IS66 family transposase | - |
| FOC84_RS00195 () | 31922..32263 | - | 342 | WP_015060805.1 | IS66 family transposase ISThsp3 | Transposase |
| FOC84_RS00200 () | 32260..32601 | - | 342 | WP_014386446.1 | hypothetical protein | - |
| FOC84_RS00205 () | 32685..32828 | - | 144 | WP_014386447.1 | IS1182 family transposase ISThsp1 | Transposase |
| FOC84_RS00210 () | 33121..34602 | + | 1482 | WP_173142681.1 | glutamine synthetase family protein | - |
| FOC84_RS00215 () | 34631..35386 | + | 756 | WP_015060807.1 | type 1 glutamine amidotransferase | - |
| FOC84_RS00220 () | 35431..36777 | + | 1347 | WP_015060642.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| FOC84_RS00225 () | 36774..37418 | + | 645 | WP_014386451.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| FOC84_RS00230 () | 37435..38442 | + | 1008 | WP_014386263.1 | ferredoxin--NADP reductase | - |
| FOC84_RS00235 () | 38475..39392 | + | 918 | WP_015060643.1 | LysR family transcriptional regulator | - |
| FOC84_RS00240 () | 39544..41100 | + | 1557 | WP_011255179.1 | IS21 family transposase IS1600 | Transposase |
| FOC84_RS00245 () | 41090..41884 | + | 795 | WP_011255145.1 | IS21 family transposase IS1600 | Transposase |
| FOC84_RS00250 () | 41959..42828 | + | 870 | Protein_49 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| FOC84_RS00255 () | 42860..45667 | - | 2808 | Protein_50 | Tn3 family transposase TnpA_IS1071 | Transposase |
| FOC84_RS00260 () | 45813..46184 | + | 372 | WP_173142682.1 | thermonuclease family protein | - |
| FOC84_RS00265 () | 46228..46995 | - | 768 | WP_173142683.1 | hypothetical protein | VF |
| FOC84_RS00270 () | 47036..47716 | - | 681 | WP_173142684.1 | SOS response-associated peptidase family protein | - |
| FOC84_RS00275 () | 47854..48855 | + | 1002 | Protein_54 | IS1595 family transposase ISAisp5 | Transposase |
| FOC84_RS00280 () | 49163..49957 | - | 795 | WP_008328897.1 | hydratase | - |
| FOC84_RS00285 () | 50000..51388 | - | 1389 | WP_173142685.1 | 2-amino-5-chloromuconic acid deaminase | VF |
| FOC84_RS00290 () | 51432..51659 | - | 228 | WP_008328886.1 | cis-(methyl)benzoate dihydrodiol dehydrogenase | - |
| FOC84_RS00295 () | 51723..51914 | - | 192 | WP_008328882.1 | 4-oxalocrotonate tautomerase family protein | - |
| FOC84_RS00300 () | 51932..52909 | - | 978 | WP_008328880.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| FOC84_RS00305 () | 52922..53962 | - | 1041 | WP_008328878.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| FOC84_RS00310 () | 53976..54890 | - | 915 | WP_008328875.1 | acetaldehyde dehydrogenase (acetylating) | - |
| FOC84_RS00315 () | 55151..55939 | - | 789 | WP_008328869.1 | 2-oxo-3-hexenedioate decarboxylase | - |
| FOC84_RS00320 () | 55959..56744 | - | 786 | WP_008328863.1 | 2-oxopent-4-enoate hydratase | - |
| FOC84_RS00325 () | 56768..57634 | - | 867 | WP_173142686.1 | alpha/beta fold hydrolase | - |
| FOC84_RS00330 () | 57631..59085 | - | 1455 | WP_079366526.1 | 2-hydroxymuconic semialdehyde dehydrogenase | - |
| FOC84_RS00335 () | 59111..59542 | - | 432 | WP_079366527.1 | heme-binding protein | - |
| FOC84_RS00340 () | 59686..60630 | - | 945 | WP_079366528.1 | catechol 2,3-dioxygenase | - |
| FOC84_RS00345 () | 60652..61023 | - | 372 | WP_008328848.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| FOC84_RS00350 () | 61150..62091 | + | 942 | WP_173142687.1 | LysR family transcriptional regulator | - |
| FOC84_RS00355 () | 62078..63139 | - | 1062 | WP_173142688.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| FOC84_RS00360 () | 63147..63503 | - | 357 | WP_034382472.1 | phenol hydroxylase subunit P4 | - |
| FOC84_RS00365 () | 63500..65062 | - | 1563 | WP_173142689.1 | aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | - |
| FOC84_RS00370 () | 65087..65356 | - | 270 | WP_008344278.1 | MmoB/DmpM family protein | - |
| FOC84_RS00375 () | 65382..66377 | - | 996 | WP_008344280.1 | aromatic/alkene monooxygenase hydroxylase subunit beta | - |
| FOC84_RS00380 () | 66424..66624 | - | 201 | WP_008344281.1 | phenol hydroxylase subunit | - |
| FOC84_RS00385 () | 66966..68645 | + | 1680 | WP_173142690.1 | Phenol regulator MopR | VF |
| FOC84_RS00390 () | 68654..69412 | + | 759 | WP_052088424.1 | FCD domain-containing protein | - |
| FOC84_RS00395 () | 69537..69975 | - | 439 | Protein_78 | IS5 family transposase IS881 | Transposase |
| FOC84_RS00400 () | 69977..70087 | - | 111 | Protein_79 | DUF2256 domain-containing protein | - |
| FOC84_RS00410 () | 71415..71717 | + | 303 | Protein_81 | transposase | - |
| FOC84_RS00415 () | 71740..72159 | - | 420 | WP_010791743.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| FOC84_RS00420 () | 72206..73315 | + | 1110 | WP_173142691.1 | cation transporter | - |
| FOC84_RS00425 () | 73724..76639 | - | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| FOC84_RS00430 () | 77030..81766 | - | 4737 | WP_012478234.1 | DUF1738 domain-containing protein | - |
| FOC84_RS00435 () | 81770..82162 | - | 393 | WP_012478235.1 | hypothetical protein | - |
| FOC84_RS00440 () | 82187..84247 | - | 2061 | WP_011255183.1 | DNA topoisomerase III | - |
| FOC84_RS00445 () | 84262..84798 | - | 537 | WP_012478236.1 | conjugative transfer signal peptidase TraF | - |
| FOC84_RS00450 () | 84795..86699 | - | 1905 | WP_012478237.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FOC84_RS00455 () | 86696..88954 | - | 2259 | WP_012478238.1 | Protein TraI | Relaxase |
| FOC84_RS00460 () | 88989..89360 | - | 372 | WP_011255188.1 | conjugal transfer transcriptional regulator TraJ | - |
| FOC84_RS00465 () | 89365..89586 | - | 222 | WP_011798730.1 | hypothetical protein | - |
| FOC84_RS00470 () | 89950..90369 | + | 420 | WP_012478175.1 | TraK family protein | - |
| FOC84_RS00475 () | 90369..91094 | + | 726 | WP_012478176.1 | conjugal transfer protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|