MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 50558 bp
Accession: NZ_CP053887 Location: 190955..241512 Organism: Streptococcus agalactiae strain SS102 Replicon: chromosome
Accession: NZ_CP053887 Location: 190955..241512 Organism: Streptococcus agalactiae strain SS102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ611_RS01095 (HQ611_01095) | 186430..186795 | + | 366 | WP_000285373.1 | DUF1033 family protein | - |
| HQ611_RS01100 (HQ611_01100) | 186968..187939 | + | 972 | WP_000250805.1 | competence type IV pilus ATPase ComGA | - |
| HQ611_RS01105 (HQ611_01105) | 187833..188876 | + | 1044 | WP_223295889.1 | competence type IV pilus assembly protein ComGB | - |
| HQ611_RS01110 (HQ611_01110) | 188873..189202 | + | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | - |
| HQ611_RS01115 (HQ611_01115) | 189177..189590 | + | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | - |
| HQ611_RS01120 (HQ611_01120) | 189616..189861 | + | 246 | WP_000521801.1 | competence type IV pilus minor pilin ComGE | - |
| HQ611_RS01125 (HQ611_01125) | 189815..190276 | + | 462 | WP_001878820.1 | competence type IV pilus minor pilin ComGF | - |
| HQ611_RS01130 (HQ611_01130) | 190254..190625 | + | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | - |
| HQ611_RS01135 (HQ611_01135) | 190740..191714 | + | 975 | WP_001008574.1 | N-6 DNA methylase | - |
| HQ611_RS01140 (HQ611_01140) | 191746..192939 | + | 1194 | WP_000047534.1 | acetate kinase | - |
| HQ611_RS01145 (HQ611_01145) | 193091..193297 | + | 207 | WP_000798241.1 | hypothetical protein | VF |
| HQ611_RS01150 (HQ611_01150) | 193356..193493 | + | 138 | WP_001865900.1 | hypothetical protein | - |
| HQ611_RS01155 (HQ611_01155) | 193534..193989 | + | 456 | WP_000905673.1 | hypothetical protein | - |
| HQ611_RS01160 (HQ611_01160) | 194058..194723 | + | 666 | WP_000008113.1 | type II CAAX endopeptidase family protein | - |
| HQ611_RS01165 (HQ611_01165) | 194744..195514 | - | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
| HQ611_RS01170 (HQ611_01170) | 195584..196651 | - | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
| HQ611_RS01175 (HQ611_01175) | 196836..197075 | - | 240 | WP_000660180.1 | hypothetical protein | - |
| HQ611_RS01180 (HQ611_01180) | 197235..197519 | + | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| HQ611_RS01185 (HQ611_01185) | 197516..197839 | + | 324 | WP_000602781.1 | thioredoxin family protein | - |
| HQ611_RS01190 (HQ611_01190) | 197872..198498 | + | 627 | WP_000578328.1 | DUF4479 and tRNA-binding domain-containing protein | - |
| HQ611_RS01195 (HQ611_01195) | 198552..199268 | - | 717 | WP_000186185.1 | class I SAM-dependent methyltransferase | - |
| HQ611_RS01200 (HQ611_01200) | 199349..199744 | + | 396 | WP_000282447.1 | single-stranded DNA-binding protein | - |
| HQ611_RS01205 (HQ611_01205) | 199868..200512 | + | 645 | WP_000416612.1 | HAD family hydrolase | - |
| HQ611_RS01210 (HQ611_01210) | 200539..202284 | + | 1746 | WP_000930334.1 | Sensor histidine kinase YpdA | VF |
| HQ611_RS01215 (HQ611_01215) | 202265..203005 | + | 741 | WP_000697630.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| HQ611_RS01220 (HQ611_01220) | 203175..203630 | + | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| HQ611_RS01225 (HQ611_01225) | 203632..204360 | + | 729 | WP_000421726.1 | antiholin-like protein LrgB | - |
| HQ611_RS01230 (HQ611_01230) | 204603..206231 | + | 1629 | WP_000170504.1 | ABC transporter substrate-binding protein | - |
| HQ611_RS01235 (HQ611_01235) | 206344..207321 | + | 978 | WP_000680645.1 | ABC transporter permease | - |
| HQ611_RS01240 (HQ611_01240) | 207318..208139 | + | 822 | WP_000603397.1 | ABC transporter permease | - |
| HQ611_RS01245 (HQ611_01245) | 208151..208954 | + | 804 | WP_000140984.1 | ABC transporter ATP-binding protein | - |
| HQ611_RS01250 (HQ611_01250) | 208938..209564 | + | 627 | WP_000171311.1 | ABC transporter ATP-binding protein | - |
| HQ611_RS01255 (HQ611_01255) | 209847..211877 | + | 2031 | WP_000434616.1 | PTS system trehalose-specific EIIBC component | - |
| HQ611_RS01260 (HQ611_01260) | 212099..213724 | + | 1626 | WP_000151017.1 | alpha,alpha-phosphotrehalase | - |
| HQ611_RS01265 (HQ611_01265) | 213940..215976 | + | 2037 | WP_000228180.1 | BglG family transcription antiterminator | - |
| HQ611_RS01270 (HQ611_01270) | 215979..216263 | + | 285 | WP_000944235.1 | PTS sugar transporter subunit IIB | - |
| HQ611_RS01275 (HQ611_01275) | 216276..217631 | + | 1356 | WP_000677351.1 | PTS ascorbate transporter subunit IIC | - |
| HQ611_RS01280 (HQ611_01280) | 217634..218491 | + | 858 | WP_000203489.1 | transketolase | - |
| HQ611_RS01285 (HQ611_01285) | 218488..219417 | + | 930 | WP_001203821.1 | transketolase C-terminal domain-containing protein | - |
| HQ611_RS01290 (HQ611_01290) | 219526..220785 | + | 1260 | WP_001203071.1 | ferric reductase-like transmembrane domain-containing protein | - |
| HQ611_RS01295 (HQ611_01295) | 220873..221142 | + | 270 | WP_001018249.1 | 30S ribosomal protein S15 | - |
| HQ611_RS01300 (HQ611_01300) | 221523..223652 | + | 2130 | WP_000043850.1 | polyribonucleotide nucleotidyltransferase | - |
| HQ611_RS01305 (HQ611_01305) | 223654..224406 | + | 753 | WP_000204782.1 | SseB family protein | - |
| HQ611_RS01310 (HQ611_01310) | 224415..224999 | + | 585 | WP_000539954.1 | serine O-acetyltransferase | - |
| HQ611_RS01315 (HQ611_01315) | 225009..225191 | + | 183 | WP_000656476.1 | lipoprotein | - |
| HQ611_RS01320 (HQ611_01320) | 225188..226531 | + | 1344 | WP_000591125.1 | cysteine--tRNA ligase | - |
| HQ611_RS01325 (HQ611_01325) | 226524..226910 | + | 387 | WP_000568029.1 | Mini-ribonuclease 3 | - |
| HQ611_RS01330 (HQ611_01330) | 227013..227768 | + | 756 | WP_000178026.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| HQ611_RS01335 (HQ611_01335) | 227765..228283 | + | 519 | WP_000716636.1 | NYN domain-containing protein | - |
| HQ611_RS01340 (HQ611_01340) | 228376..229236 | + | 861 | WP_000143135.1 | DegV family protein | - |
| HQ611_RS01345 | 229773..229892 | + | 120 | Protein_209 | helix-turn-helix domain-containing protein | - |
| HQ611_RS01350 (HQ611_01345) | 230117..230563 | + | 447 | WP_001865567.1 | 50S ribosomal protein L13 | - |
| HQ611_RS01355 (HQ611_01350) | 230584..230976 | + | 393 | WP_000035940.1 | 30S ribosomal protein S9 | - |
| HQ611_RS01360 (HQ611_01355) | 231104..232258 | - | 1155 | WP_000022165.1 | Prophage integrase IntS ; Integrase | Integrase |
| HQ611_RS01365 (HQ611_01360) | 232322..232912 | - | 591 | WP_000181098.1 | helix-turn-helix transcriptional regulator | - |
| HQ611_RS01370 (HQ611_01365) | 233067..233372 | + | 306 | WP_000331954.1 | hypothetical protein | - |
| HQ611_RS01375 (HQ611_01370) | 233508..233786 | + | 279 | WP_000134670.1 | hypothetical protein | - |
| HQ611_RS01380 (HQ611_01375) | 233797..234027 | + | 231 | WP_000360142.1 | hypothetical protein | - |
| HQ611_RS01385 (HQ611_01380) | 234040..234366 | + | 327 | WP_000384270.1 | replication initiator protein A | - |
| HQ611_RS01390 (HQ611_01385) | 234370..234999 | + | 630 | WP_000591148.1 | hypothetical protein | - |
| HQ611_RS01395 (HQ611_01390) | 235312..236187 | + | 876 | WP_000770113.1 | hypothetical protein | - |
| HQ611_RS01400 (HQ611_01395) | 236223..236657 | + | 435 | WP_001220479.1 | hypothetical protein | - |
| HQ611_RS01405 (HQ611_01400) | 236973..238229 | + | 1257 | WP_000122832.1 | MobV family relaxase | - |
| HQ611_RS01410 (HQ611_01405) | 238397..238867 | + | 471 | WP_000130119.1 | hypothetical protein | - |
| HQ611_RS01415 (HQ611_01410) | 239172..239507 | - | 336 | WP_000384858.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HQ611_RS01420 (HQ611_01415) | 239497..239784 | - | 288 | WP_000255538.1 | hypothetical protein | Antitoxin Detail |
| HQ611_RS01425 (HQ611_01420) | 240187..241407 | - | 1221 | WP_000156558.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HQ611_RS01430 (HQ611_01425) | 241468..241728 | - | 261 | WP_001196072.1 | helix-turn-helix domain-containing protein | - |
| HQ611_RS01435 (HQ611_01430) | 241740..242486 | - | 747 | WP_000966632.1 | hypothetical protein | - |
| HQ611_RS01440 (HQ611_01435) | 242672..243463 | - | 792 | WP_001868842.1 | hypothetical protein | - |
| HQ611_RS01445 (HQ611_01440) | 243444..243977 | - | 534 | WP_000680721.1 | hypothetical protein | - |
| HQ611_RS01450 (HQ611_01445) | 243977..244315 | - | 339 | WP_001187920.1 | hypothetical protein | - |
| HQ611_RS01455 (HQ611_01450) | 244498..245427 | + | 930 | WP_000381084.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|