MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 49715 bp
Accession: NZ_CP053787 Location: 3818854..3868568 Organism: Escherichia coli isolate J31 Replicon: chromosome
Accession: NZ_CP053787 Location: 3818854..3868568 Organism: Escherichia coli isolate J31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQN81_RS18420 () | 3815282..3815869 | + | 588 | WP_023293471.1 | hypothetical protein | - |
| HQN81_RS18425 () | 3816216..3817400 | + | 1185 | WP_023892874.1 | site-specific integrase | - |
| HQN81_RS18430 () | 3817455..3817811 | - | 357 | WP_032165636.1 | Arm DNA-binding domain-containing protein | - |
| HQN81_RS18435 () | 3817861..3819774 | - | 1914 | WP_053266158.1 | DUF927 domain-containing protein | - |
| HQN81_RS18440 () | 3819860..3821038 | - | 1179 | WP_172614172.1 | IS91 family transposase ISAzo26 | Transposase |
| HQN81_RS18445 () | 3821486..3821839 | + | 354 | WP_042111456.1 | hypothetical protein | - |
| HQN81_RS18450 () | 3821832..3822263 | + | 432 | WP_096998795.1 | hypothetical protein | - |
| HQN81_RS18455 () | 3822311..3822739 | + | 429 | WP_096998794.1 | DUF2787 family protein | - |
| HQN81_RS18460 () | 3822798..3823262 | + | 465 | WP_000286078.1 | lecithin retinol acyltransferase family protein | - |
| HQN81_RS18465 () | 3823241..3823480 | + | 240 | WP_000113424.1 | DeoR family transcriptional regulator | - |
| HQN81_RS18470 () | 3823558..3823941 | + | 384 | WP_017382952.1 | hypothetical protein | - |
| HQN81_RS18475 () | 3824085..3824834 | + | 750 | WP_063615036.1 | DUF3944 domain-containing protein | - |
| HQN81_RS18480 () | 3824937..3825650 | + | 714 | WP_000172688.1 | WYL domain-containing protein | - |
| HQN81_RS18485 () | 3825709..3826020 | + | 312 | WP_172614173.1 | hypothetical protein | - |
| HQN81_RS18490 () | 3826094..3827959 | + | 1866 | WP_160384670.1 | DUF262 domain-containing protein | - |
| HQN81_RS18495 () | 3828163..3828378 | + | 216 | WP_172614174.1 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| HQN81_RS18500 () | 3828407..3829104 | + | 698 | Protein_3607 | IS1 family transposase | - |
| HQN81_RS18505 () | 3829437..3829544 | - | 108 | WP_001313273.1 | hypothetical protein | - |
| HQN81_RS18510 () | 3829553..3829738 | - | 186 | WP_089581225.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| HQN81_RS18515 () | 3829909..3831225 | + | 1317 | WP_172614175.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| HQN81_RS18520 () | 3831364..3832361 | + | 998 | Protein_3611 | IS110 family transposase | - |
| HQN81_RS18525 () | 3832720..3834063 | + | 1344 | WP_029397907.1 | esterase-like activity of phytase family protein | - |
| HQN81_RS18530 () | 3834181..3834878 | - | 698 | Protein_3613 | IS1 family transposase | - |
| HQN81_RS18535 () | 3834981..3836339 | + | 1359 | WP_172614176.1 | hypothetical protein | - |
| HQN81_RS18540 () | 3836346..3837053 | + | 708 | WP_000357807.1 | OmpA family protein | - |
| HQN81_RS18545 () | 3837057..3838160 | + | 1104 | WP_000777276.1 | HNH endonuclease | - |
| HQN81_RS18550 () | 3838385..3838627 | + | 243 | Protein_3617 | N-acetylneuraminic acid mutarotase | - |
| HQN81_RS18555 () | 3838715..3839695 | + | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| HQN81_RS18560 () | 3839844..3840203 | - | 360 | Protein_3619 | WYL domain-containing protein | - |
| HQN81_RS18565 () | 3840623..3841360 | - | 738 | WP_001389182.1 | porin family protein | - |
| HQN81_RS18570 () | 3841727..3842068 | + | 342 | Protein_3621 | IS3 family transposase ISEc31 | Transposase |
| HQN81_RS18575 () | 3842741..3844249 | + | 1509 | WP_172614206.1 | group II intron reverse transcriptase/maturase | - |
| HQN81_RS18580 () | 3844330..3844509 | + | 180 | Protein_3623 | IS3 family transposase | - |
| HQN81_RS18585 () | 3844791..3845867 | + | 1077 | WP_038989268.1 | IS110 family transposase ISEc21 | Transposase |
| HQN81_RS18590 () | 3845884..3846192 | + | 309 | Protein_3625 | IS3 family transposase ISCfr6 | Transposase |
| HQN81_RS18595 () | 3846211..3846600 | + | 390 | Protein_3626 | hypothetical protein | - |
| HQN81_RS18600 () | 3846619..3846987 | + | 369 | WP_032216526.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HQN81_RS18605 () | 3847077..3847454 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| HQN81_RS18610 () | 3847451..3847600 | + | 150 | Protein_3629 | hypothetical protein | - |
| HQN81_RS18615 () | 3847676..3847873 | + | 198 | WP_087904847.1 | DUF957 domain-containing protein | - |
| HQN81_RS18620 () | 3847958..3848800 | + | 843 | WP_080029955.1 | DUF4942 domain-containing protein | - |
| HQN81_RS18625 () | 3849081..3849617 | - | 537 | WP_172614177.1 | Type II secretion system protein M | VF |
| HQN81_RS18630 () | 3849619..3850797 | - | 1179 | WP_000094962.1 | Type II secretion system protein L | VF |
| HQN81_RS18635 () | 3850794..3851771 | - | 978 | WP_000633209.1 | Putative type II secretion system protein K | VF |
| HQN81_RS18640 () | 3851774..3852373 | - | 600 | WP_001255034.1 | Type II secretion system protein J | VF |
| HQN81_RS18645 () | 3852370..3852741 | - | 372 | WP_000820113.1 | Type II secretion system protein I | VF |
| HQN81_RS18650 () | 3852738..3853301 | - | 564 | WP_119188181.1 | Type II secretion system protein H | VF |
| HQN81_RS18655 () | 3853305..3853760 | - | 456 | WP_001087289.1 | Type II secretion system protein G | VF |
| HQN81_RS18660 () | 3853777..3855000 | - | 1224 | WP_001173458.1 | Type II secretion system protein F | VF |
| HQN81_RS18665 () | 3855000..3856493 | - | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| HQN81_RS18670 () | 3856493..3858553 | - | 2061 | WP_000498824.1 | Type II secretion system protein D | VF |
| HQN81_RS18675 () | 3858583..3859542 | - | 960 | WP_001549326.1 | Type II secretion system protein C | VF |
| HQN81_RS18680 () | 3859560..3859970 | - | 411 | WP_001389459.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| HQN81_RS18685 () | 3860036..3860845 | - | 810 | WP_001469316.1 | Leader peptidase PppA | VF |
| HQN81_RS18690 () | 3861043..3865602 | - | 4560 | WP_001469318.1 | hypothetical protein | VF |
| HQN81_RS18695 () | 3866087..3867769 | - | 1683 | WP_000259302.1 | glycolate permease GlcA | - |
| HQN81_RS18700 () | 3868124..3870295 | - | 2172 | WP_000084131.1 | malate synthase G | - |
| HQN81_RS18705 () | 3870317..3870721 | - | 405 | WP_000853256.1 | protein GlcG | - |
| HQN81_RS18710 () | 3870726..3871949 | - | 1224 | WP_001194661.1 | glycolate oxidase subunit GlcF | - |
| HQN81_RS18715 () | 3871960..3873012 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|