MGE detailed information
MGE type: Prophage MGE length: 48211 bp
Accession: NZ_CP053284 Location: 2535869..2584079 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Accession: NZ_CP053284 Location: 2535869..2584079 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ22_RS12200 () | 2531465..2531668 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HHJ22_RS12205 () | 2531703..2533163 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| HHJ22_RS12210 () | 2533252..2534535 | - | 1284 | Protein_2394 | MHS family MFS transporter | - |
| HHJ22_RS12215 () | 2535137..2535250 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| HHJ22_RS12220 () | 2535319..2535552 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HHJ22_RS12225 () | 2535869..2536459 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HHJ22_RS12230 () | 2536557..2537132 | - | 576 | WP_000885595.1 | tail fiber assembly protein | - |
| HHJ22_RS12235 () | 2537132..2540239 | - | 3108 | WP_174147712.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HHJ22_RS12240 () | 2540304..2540903 | - | 600 | WP_016232698.1 | Outer membrane protein X | VF |
| HHJ22_RS12245 () | 2540971..2543840 | - | 2870 | Protein_2401 | host specificity protein J | - |
| HHJ22_RS12250 () | 2544208..2545878 | - | 1671 | Protein_2402 | host specificity protein J | - |
| HHJ22_RS12255 () | 2545939..2546571 | - | 633 | WP_000090917.1 | tail assembly protein | - |
| HHJ22_RS12260 () | 2546508..2547251 | - | 744 | WP_089585290.1 | C40 family peptidase | - |
| HHJ22_RS12265 () | 2547257..2547955 | - | 699 | WP_069903524.1 | phage minor tail protein L | - |
| HHJ22_RS12270 () | 2547955..2548284 | - | 330 | Protein_2406 | phage tail protein | - |
| HHJ22_RS12275 () | 2548281..2550842 | - | 2562 | WP_168725972.1 | phage tail tape measure protein | - |
| HHJ22_RS12280 () | 2550835..2551269 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| HHJ22_RS12285 () | 2551251..2551673 | - | 423 | WP_000479146.1 | phage minor tail protein G | - |
| HHJ22_RS12290 () | 2551689..2552429 | - | 741 | WP_168725971.1 | phage tail protein | - |
| HHJ22_RS12295 () | 2552437..2552832 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| HHJ22_RS12300 () | 2552829..2553407 | - | 579 | WP_001541219.1 | phage tail protein | - |
| HHJ22_RS12305 () | 2553419..2553772 | - | 354 | WP_000753001.1 | head-tail joining protein | - |
| HHJ22_RS12310 () | 2553784..2554179 | - | 396 | WP_032318908.1 | DNA-packaging protein FI | - |
| HHJ22_RS12315 () | 2554221..2555246 | - | 1026 | WP_024232991.1 | major capsid protein | - |
| HHJ22_RS12320 () | 2555302..2555634 | - | 333 | WP_001299443.1 | head decoration protein | - |
| HHJ22_RS12325 () | 2555644..2556963 | - | 1320 | WP_134880915.1 | S49 family peptidase | - |
| HHJ22_RS12330 () | 2556944..2558545 | - | 1602 | WP_134880914.1 | phage portal protein | - |
| HHJ22_RS12335 () | 2558542..2558748 | - | 207 | WP_000198149.1 | gpW family protein | - |
| HHJ22_RS12340 () | 2558745..2560670 | - | 1926 | WP_168725969.1 | phage terminase large subunit family protein | - |
| HHJ22_RS12345 () | 2560645..2561190 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| HHJ22_RS12350 () | 2561579..2561812 | + | 234 | WP_032156745.1 | YlcI/YnfO family protein | - |
| HHJ22_RS12355 () | 2561870..2562280 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HHJ22_RS12360 () | 2562432..2562605 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HHJ22_RS12365 () | 2562777..2562932 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| HHJ22_RS12370 () | 2563012..2563077 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| HHJ22_RS12375 () | 2563080..2563268 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| HHJ22_RS12380 () | 2563279..2563491 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HHJ22_RS12385 () | 2563854..2564351 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HHJ22_RS12390 () | 2564348..2564881 | - | 534 | WP_001092971.1 | lysozyme | - |
| HHJ22_RS12395 () | 2564878..2565189 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| HHJ22_RS12400 () | 2565194..2565409 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HHJ22_RS12405 () | 2566163..2566378 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HHJ22_RS12410 () | 2566679..2566891 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HHJ22_RS12415 () | 2566946..2567035 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| HHJ22_RS12420 () | 2567313..2568065 | - | 753 | WP_001047135.1 | antitermination protein | - |
| HHJ22_RS12425 () | 2568079..2569128 | - | 1050 | WP_001424248.1 | DUF968 domain-containing protein | - |
| HHJ22_RS12430 () | 2569130..2569408 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| HHJ22_RS12435 () | 2569475..2569726 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| HHJ22_RS12440 () | 2569943..2570098 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HHJ22_RS12445 () | 2570170..2570457 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HHJ22_RS12450 () | 2570457..2570696 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HHJ22_RS12455 () | 2570721..2571026 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| HHJ22_RS12460 () | 2571229..2571561 | + | 333 | WP_001301033.1 | protein FlxA | - |
| HHJ22_RS12465 () | 2571998..2573311 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| HHJ22_RS12470 () | 2573489..2573671 | + | 183 | WP_000955178.1 | hypothetical protein | - |
| HHJ22_RS12475 () | 2574978..2575334 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| HHJ22_RS12480 () | 2575331..2575753 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| HHJ22_RS12485 () | 2575794..2576759 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| HHJ22_RS12490 () | 2576740..2577261 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| HHJ22_RS12495 () | 2577245..2577472 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| HHJ22_RS12500 () | 2577550..2577957 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| HHJ22_RS12505 () | 2578150..2578305 | + | 156 | WP_016232058.1 | DUF1391 family protein | - |
| HHJ22_RS12510 () | 2578307..2578882 | + | 576 | WP_000344953.1 | hypothetical protein | - |
| HHJ22_RS12515 () | 2579369..2579557 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HHJ22_RS12520 () | 2579554..2579745 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| HHJ22_RS12525 () | 2579839..2582310 | + | 2472 | WP_174147714.1 | exonuclease | - |
| HHJ22_RS12530 () | 2582383..2582634 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| HHJ22_RS12535 () | 2582669..2583949 | + | 1281 | WP_016232059.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HHJ22_RS12540 () | 2583969..2584079 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| HHJ22_RS12545 () | 2584137..2585156 | - | 1020 | WP_168725977.1 | Zn-dependent oxidoreductase | - |
| HHJ22_RS12550 () | 2585168..2586382 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HHJ22_RS12555 () | 2586588..2586914 | - | 327 | WP_168725976.1 | YnfA family protein | - |
| HHJ22_RS12560 () | 2587049..2587390 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HHJ22_RS12565 () | 2587425..2587985 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HHJ22_RS12570 () | 2587988..2588698 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|