MGE detailed information
MGE type: Genomic_island MGE length: 73996 bp
Accession: NZ_CP053284 Location: 1874094..1948089 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Accession: NZ_CP053284 Location: 1874094..1948089 Organism: Escherichia coli strain SCU-104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ22_RS08890 () | 1869399..1870037 | + | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
| HHJ22_RS08895 () | 1870077..1874039 | - | 3963 | WP_001326840.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| HHJ22_RS08900 () | 1874094..1874303 | + | 210 | WP_000979516.1 | hypothetical protein | - |
| HHJ22_RS08905 () | 1874462..1875970 | + | 1509 | WP_001018479.1 | sodium/proline symporter PutP | - |
| HHJ22_RS08910 () | 1876513..1877343 | + | 831 | WP_000497942.1 | FTR1 family protein | - |
| HHJ22_RS08915 () | 1877401..1878528 | + | 1128 | WP_000154398.1 | iron uptake system protein EfeO | - |
| HHJ22_RS08920 () | 1878534..1879805 | + | 1272 | WP_001199471.1 | deferrochelatase/peroxidase EfeB | - |
| HHJ22_RS08925 () | 1880426..1881214 | + | 789 | WP_000533522.1 | phosphate starvation-inducible protein PhoH | - |
| HHJ22_RS08930 () | 1881264..1881677 | - | 414 | WP_001061095.1 | poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD | - |
| HHJ22_RS08935 () | 1881679..1883004 | - | 1326 | WP_168725817.1 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| HHJ22_RS08940 () | 1882997..1885015 | - | 2019 | WP_000945561.1 | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase | VF |
| HHJ22_RS08945 () | 1885024..1887447 | - | 2424 | Protein_1750 | poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA | - |
| HHJ22_RS08950 () | 1888034..1889392 | + | 1359 | WP_000409873.1 | GGDEF domain-containing protein | - |
| HHJ22_RS08955 () | 1889414..1889737 | + | 324 | WP_000389396.1 | ACP S-malonyltransferase | - |
| HHJ22_RS08960 () | 1889734..1890720 | + | 987 | WP_000611859.1 | hypothetical protein | - |
| HHJ22_RS08965 () | 1891087..1892289 | + | 1203 | WP_000279872.1 | Prophage integrase IntA ; Integrase | Integrase |
| HHJ22_RS08970 () | 1892476..1894293 | - | 1818 | WP_023356228.1 | hypothetical protein | - |
| HHJ22_RS08975 () | 1894490..1895151 | + | 662 | Protein_1756 | IS1 family transposase | - |
| HHJ22_RS08980 () | 1895405..1895701 | + | 297 | WP_001303889.1 | AlpA family transcriptional regulator | - |
| HHJ22_RS08985 () | 1895928..1896125 | + | 198 | WP_000579535.1 | DUF3987 domain-containing protein | - |
| HHJ22_RS08990 () | 1896344..1897778 | + | 1435 | Protein_1759 | DUF3987 domain-containing protein | - |
| HHJ22_RS08995 () | 1898599..1899162 | + | 564 | WP_000282084.1 | inovirus-type Gp2 protein | - |
| HHJ22_RS09000 () | 1899317..1901677 | + | 2361 | WP_000233452.1 | DEAD/DEAH box helicase family protein | - |
| HHJ22_RS09005 () | 1901839..1902015 | - | 177 | WP_000136079.1 | hypothetical protein | - |
| HHJ22_RS09010 () | 1902153..1902395 | - | 243 | Protein_1763 | IS30 family transposase | - |
| HHJ22_RS09015 () | 1902434..1903972 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ22_RS09020 () | 1904022..1904369 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ22_RS09025 () | 1904366..1904746 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ22_RS09030 () | 1904837..1905133 | - | 297 | Protein_1767 | IS30 family transposase IS30D | Transposase |
| HHJ22_RS09035 () | 1905195..1906091 | + | 897 | Protein_1768 | IS3 family transposase ISSd1 | Transposase |
| HHJ22_RS09040 () | 1906138..1906743 | + | 606 | WP_028913479.1 | conjugal transfer protein TraT | - |
| HHJ22_RS09045 () | 1906791..1907042 | - | 252 | WP_001303891.1 | hypothetical protein | - |
| HHJ22_RS09050 () | 1907066..1907356 | - | 291 | WP_001304211.1 | hypothetical protein | - |
| HHJ22_RS09055 () | 1908042..1908401 | + | 360 | WP_000024297.1 | diacylglycerol kinase | - |
| HHJ22_RS09060 () | 1908494..1910113 | - | 1620 | WP_000591994.1 | Phosphoethanolamine transferase EptA | VF |
| HHJ22_RS09065 () | 1910338..1910613 | - | 276 | WP_000134927.1 | hypothetical protein | - |
| HHJ22_RS09070 () | 1910994..1911773 | + | 780 | WP_000886249.1 | urease accessory protein UreD | - |
| HHJ22_RS09075 () | 1911783..1912085 | + | 303 | WP_000424145.1 | Urease subunit gamma | VF |
| HHJ22_RS09080 () | 1912094..1912414 | + | 321 | WP_000612148.1 | Urease subunit beta | VF |
| HHJ22_RS09085 () | 1912440..1914115 | + | 1676 | Protein_1778 | Urease subunit alpha | VF |
| HHJ22_RS09090 () | 1914125..1914589 | + | 465 | WP_000966485.1 | urease accessory protein UreE | - |
| HHJ22_RS09095 () | 1914590..1915264 | + | 675 | WP_001142971.1 | urease accessory protein UreF | - |
| HHJ22_RS09100 () | 1915276..1915893 | + | 618 | WP_001021388.1 | Urease accessory protein UreG | VF |
| HHJ22_RS09105 () | 1915941..1916180 | - | 240 | Protein_1782 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HHJ22_RS09110 () | 1916230..1916490 | - | 261 | Protein_1783 | IS3 family transposase ISSfl10 | Transposase |
| HHJ22_RS09115 () | 1917103..1917366 | + | 264 | WP_000803992.1 | type B 50S ribosomal protein L31 | - |
| HHJ22_RS09120 () | 1917668..1917808 | + | 141 | WP_001135715.1 | Hok/Gef family protein | - |
| HHJ22_RS09125 () | 1918679..1919350 | - | 672 | WP_000397130.1 | hypothetical protein | - |
| HHJ22_RS09130 () | 1920883..1921599 | - | 717 | Protein_1787 | IS66 family transposase ISEc49 | Transposase |
| HHJ22_RS09135 () | 1921688..1922113 | + | 426 | WP_000435663.1 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS09140 () | 1922110..1922460 | + | 351 | WP_000624701.1 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS09145 () | 1922491..1924106 | + | 1616 | Protein_1790 | IS66 family transposase IS682 | Transposase |
| HHJ22_RS09150 () | 1924137..1924337 | - | 201 | Protein_1791 | IS66 family transposase ISEc49 | Transposase |
| HHJ22_RS09155 () | 1924510..1925622 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| HHJ22_RS09160 () | 1925673..1925865 | + | 193 | Protein_1793 | ngrB | - |
| HHJ22_RS09165 () | 1925781..1926374 | + | 594 | WP_001483999.1 | GTPase family protein | - |
| HHJ22_RS09170 () | 1926746..1929595 | + | 2850 | WP_174147676.1 | calcium-binding autotransporter Cah | - |
| HHJ22_RS09175 () | 1929706..1932090 | + | 2385 | WP_000544679.1 | dynamin family protein | - |
| HHJ22_RS09180 () | 1932087..1932992 | + | 906 | WP_000203545.1 | chemotaxis protein | - |
| HHJ22_RS09185 () | 1932989..1934059 | + | 1071 | WP_174147677.1 | patatin-like phospholipase family protein | - |
| HHJ22_RS09190 () | 1934399..1935217 | + | 819 | WP_001234682.1 | DUF945 domain-containing protein | - |
| HHJ22_RS09195 () | 1935308..1935793 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| HHJ22_RS09200 () | 1935809..1936285 | + | 477 | WP_001186738.1 | RadC family protein | - |
| HHJ22_RS09205 () | 1936348..1936569 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| HHJ22_RS09210 () | 1936732..1937106 | + | 375 | WP_001280953.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HHJ22_RS09215 () | 1937153..1937527 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| HHJ22_RS09220 () | 1937524..1938015 | + | 492 | WP_000976857.1 | hypothetical protein | - |
| HHJ22_RS09225 () | 1938027..1938224 | + | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| HHJ22_RS09230 () | 1938309..1939151 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| HHJ22_RS09240 () | 1939622..1940560 | + | 939 | WP_000351317.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| HHJ22_RS09245 () | 1940615..1941352 | + | 738 | WP_000283667.1 | zinc-binding phosphatase | - |
| HHJ22_RS09250 () | 1941376..1941930 | + | 555 | WP_001001921.1 | molecular chaperone YcdY | - |
| HHJ22_RS09255 () | 1942032..1942523 | + | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| HHJ22_RS09260 () | 1942587..1943420 | - | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| HHJ22_RS09265 () | 1943447..1943863 | - | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| HHJ22_RS09270 () | 1943888..1944277 | - | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| HHJ22_RS09275 () | 1944282..1944932 | - | 651 | WP_000481505.1 | CsgBAC operon transcriptional regulatory protein | VF |
| HHJ22_RS09280 () | 1945687..1946142 | + | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| HHJ22_RS09285 () | 1946183..1946638 | + | 456 | WP_000771437.1 | Major curlin subunit | VF |
| HHJ22_RS09290 () | 1946697..1947029 | + | 333 | WP_001094300.1 | Curli assembly protein CsgC | VF |
| HHJ22_RS09295 () | 1947150..1947461 | + | 312 | WP_000489587.1 | hypothetical protein | - |
| HHJ22_RS09300 () | 1947556..1948089 | + | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| HHJ22_RS09305 () | 1948031..1949512 | + | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| HHJ22_RS09310 () | 1949520..1950677 | - | 1158 | WP_001070375.1 | glucans biosynthesis protein MdoC | - |
| HHJ22_RS09315 () | 1951071..1952606 | + | 1536 | WP_001343212.1 | glucans biosynthesis protein MdoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|